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PROSITE entry PS00989


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General information about the entry

Entry name [info] CLAT_ADAPTOR_S
Accession [info] PS00989
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-DEC-2001 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00760

Name and characterization of the entry

Description [info] Clathrin adaptor complexes small chain signature.
Pattern [info]
[LIVMC]-[LIVM]-Y-[KR]-x(4)-L-Y-F.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 38 in 38 different sequences
Number of true positive hits 35 in 35 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 23
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 92.11 %
Recall (true positives / (true positives + false negatives)) 60.34 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
35 sequences

AP1S1_ARATH (Q8LEZ8), AP1S1_BOVIN (Q1JQ98), AP1S1_HUMAN (P61966), 
AP1S1_MOUSE (P61967), AP1S1_YEAST (P35181), AP1S2_ARATH (O23685), 
AP1S2_BOVIN (Q3ZBS3), AP1S2_HUMAN (P56377), AP1S2_MOUSE (Q9DB50), 
AP1S3_HUMAN (Q96PC3), AP1S3_MOUSE (Q7TN05), AP2S1_BOVIN (Q17QC5), 
AP2S1_HUMAN (P53680), AP2S1_MOUSE (P62743), AP2S1_PONAB (Q5R940), 
AP2S1_RAT   (P62744), AP2S_SCHPO  (Q9Y7L6), AP2S_YEAST  (Q00381), 
AP3S1_BOVIN (Q2YDH6), AP3S1_HUMAN (Q92572), AP3S1_MOUSE (Q9DCR2), 
AP3S2_BOVIN (Q1JQA3), AP3S2_HUMAN (P59780), AP3S2_MOUSE (Q8BSZ2), 
AP3S2_PONAB (Q5RDP9), AP3S_ARATH  (Q8VZ37), AP3S_EREGS  (Q75F71), 
AP3S_SCHPO  (Q09905), AP3S_YEAST  (P47064), APS3_CANAL  (Q59QC5), 
COPZ1_BOVIN (P35604), COPZ1_HUMAN (P61923), COPZ1_MOUSE (P61924), 
COPZ1_PONAB (Q5R5F2), COPZ_CAEEL  (O17901)
» more

UniProtKB/Swiss-Prot
False negative sequences
23 sequences

AP1S1_SCHPO (Q9P7N2), AP2S_ASPFU  (Q4WS49), AP2S_EMENI  (Q5BFF8), 
AP2S_GIBZE  (Q4ICG5), AP2S_NEUCR  (Q7SAQ1), AP4S1_BOVIN (Q3ZBB6), 
AP4S1_HUMAN (Q9Y587), AP4S1_MOUSE (Q9WVL1), AP4S_ARATH  (O82201), 
COPZ1_ARATH (Q940S5), COPZ1_ORYSJ (Q9MAX5), COPZ2_ARATH (Q84LG4), 
COPZ2_HUMAN (Q9P299), COPZ2_MOUSE (Q9JHH9), COPZ2_ORYSJ (Q6Z844), 
COPZ3_ARATH (Q8H1F4), COPZ3_ORYSJ (Q5NA06), COPZA_DICDI (Q54HD4), 
COPZB_DICDI (Q54CA7), COPZ_ENCCU  (Q8SRD1), COPZ_SCHPO  (O74891), 
COPZ_YEAST  (P53600), TSTD_DICDI  (C0HLF1)
» more

UniProtKB/Swiss-Prot
False positive sequences
3 sequences

SYC_LEPIN   (Q8F525), SYI_BLOFL   (Q7VQL0), TSAD_BUCCC  (Q058D1)

		
PDB
[Detailed view]
62 PDB

1W63; 2HF6; 2JKR; 2JKT; 2VGL; 2XA7; 3TJZ; 4HMY; 4NEE; 4P6Z; 4UQI; 5A1U; 5A1V; 5A1W; 5A1X; 5A1Y; 5MC7; 5NZR; 5NZS; 5NZT; 5NZU; 5NZV; 6CM9; 6CRI; 6D83; 6D84; 6DFF; 6OWO; 6OWT; 6OXL; 6QH5; 6QH6; 6QH7; 6URI; 6YAE; 6YAF; 6YAH; 7OG1; 7OHO; 7P3X; 7P3Y; 7P3Z; 7R4H; 7RW8; 7RW9; 7RWA; 7RWB; 7RWC; 7UX3; 7Z5C; 8D4C; 8D4D; 8D4E; 8D4F; 8D4G; 8D9R; 8D9S; 8D9T; 8D9U; 8D9V; 8D9W; 8T1O
» more