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PROSITE entry PS00995


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General information about the entry

Entry name [info] TCP1_3
Accession [info] PS00995
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-NOV-1995 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00610

Name and characterization of the entry

Description [info] Chaperonins TCP-1 signature 3.
Pattern [info] 
Q-[DEK]-x-x-[LIVMGTA]-[GA]-D-G-T.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 155 in 155 different sequences
Number of true positive hits 143 in 143 different sequences
Number of 'unknown' hits 0
Number of false positive hits 12 in 12 different sequences
Number of false negative sequences 9
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 92.26 %
Recall (true positives / (true positives + false negatives)) 94.08 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 143 sequences 

TCPA_ARATH  (P28769), TCPA_BOVIN  (Q32L40), TCPA_CAEEL  (P41988), 

TCPA_CRIGR  (P18279), TCPA_DICDI  (Q55BM4), TCPA_DROME  (P12613), 
TCPA_ENCCU  (Q8SSC9), TCPA_HUMAN  (P17987), TCPA_MACFA  (Q4R5G2), 
TCPA_MONDO  (Q9XT06), TCPA_MOUSE  (P11983), TCPA_PALPA  (Q9W790), 
TCPA_RAT(P28480), TCPA_SCHMA  (Q94757), TCPA_SCHPO  (O94501), 
TCPA_TETPY  (O15891), TCPA_YEAST  (P12612), TCPB_ARATH  (Q940P8), 
TCPB_BOVIN  (Q3ZBH0), TCPB_CAEEL  (P47207), TCPB_DICDI  (Q54ES9), 
TCPB_HUMAN  (P78371), TCPB_MACFA  (Q4R6F8), TCPB_MESAU  (P86245), 
TCPB_MOUSE  (P80314), TCPB_RAT(Q5XIM9), TCPB_SCHPO  (Q10147), 
TCPB_YEAST  (P39076), TCPD_ARATH  (Q9LV21), TCPD_BOVIN  (Q2T9X2), 
TCPD_CAEEL  (P47208), TCPD_CANGA  (Q6FQT2), TCPD_DEBHA  (Q6BXF6), 
TCPD_DICDI  (Q54CL2), TCPD_EREGS  (Q75A36), TCPD_HUMAN  (P50991), 
TCPD_KLULA  (Q6CL82), TCPD_MOUSE  (P80315), TCPD_OCHTR  (Q9NB32), 
TCPD_PONAB  (Q5R637), TCPD_RAT(Q7TPB1), TCPD_SCHPO  (P50999), 
TCPD_TAKRU  (P53451), TCPD_YARLI  (Q6C100), TCPD_YEAST  (P39078), 
TCPE1_AVESA (P40412), TCPE2_AVESA (P54411), TCPE_ARATH  (O04450), 
TCPE_CAEEL  (P47209), TCPE_DICDI  (Q54TD3), TCPE_ENCCU  (Q8SRP9), 
TCPE_HUMAN  (P48643), TCPE_MACFA  (Q4R6V2), TCPE_MOUSE  (P80316), 
TCPE_PONAB  (Q5RF02), TCPE_RAT(Q68FQ0), TCPE_SCHPO  (Q9UTM4), 
TCPE_YEAST  (P40413), TCPG_ARATH  (Q84WV1), TCPG_BOVIN  (Q3T0K2), 
TCPG_CAEEL  (Q9N4J8), TCPG_DICDI  (Q54TH8), TCPG_DROME  (P48605), 
TCPG_ENCCU  (Q8SR76), TCPG_HUMAN  (P49368), TCPG_MOUSE  (P80318), 
TCPG_OXYGR  (O00782), TCPG_PIG(Q29068), TCPG_PONAB  (Q5NVF9), 
TCPG_RAT(Q6P502), TCPG_SCHPO  (O74341), TCPG_TETPY  (P54408), 
TCPG_XENLA  (P50143), TCPG_YEAST  (P39077), TCPH_ARATH  (Q9SF16), 
TCPH_BOVIN  (Q2NKZ1), TCPH_CHICK  (Q5ZJK8), TCPH_DICDI  (Q54ER7), 
TCPH_ENCCU  (Q8SR53), TCPH_HUMAN  (Q99832), TCPH_MOUSE  (P80313), 
TCPH_PLAF7  (O77323), TCPH_PONAB  (Q5R5C8), TCPH_SCHPO  (P87153), 
TCPH_TETPY  (P54409), TCPH_TETTH  (P54410), TCPH_YEAST  (P42943), 
TCPQ_BOVIN  (Q3ZCI9), TCPQ_CHICK  (Q6EE31), TCPQ_DICDI  (Q552J0), 
TCPQ_HUMAN  (P50990), TCPQ_MACFA  (Q4R5J0), TCPQ_MOUSE  (P42932), 
TCPQ_PONAB  (Q5RAP1), TCPQ_YEAST  (P47079), TCPW_BOVIN  (Q3T084), 
TCPW_HUMAN  (Q92526), TCPW_MOUSE  (Q61390), TCPZ_BOVIN  (Q3MHL7), 
TCPZ_CAEEL  (P46550), TCPZ_CHICK  (Q5ZJ54), TCPZ_DICDI  (Q76NU3), 
TCPZ_HUMAN  (P40227), TCPZ_MOUSE  (P80317), TCPZ_PIG(Q29236), 
TCPZ_PONAB  (Q5RCD2), TCPZ_RABIT  (O77622), TCPZ_SCHPO  (O94515), 
TCPZ_YEAST  (P39079), THS1_HALVD  (O30561), THS2_HALVD  (O30560), 
THS3_HALVD  (Q9HHA2), THSA_AERPE  (Q9YDK6), THSA_ARCFU  (O28045), 
THSA_HALSA  (Q9HN70), THSA_METTH  (O26320), THSA_SACS2  (Q9V2S9), 
THSA_SACSH  (P46219), THSA_SULAC  (Q9V2T5), THSA_SULTO  (O24734), 
THSA_THEAC  (P48424), THSA_THEK1  (P61112), THSA_THEK8  (O24731), 
THSA_THEKO  (P61111), THSB_AERPE  (Q9YA66), THSB_ARCFU  (O28821), 
THSB_DESMO  (Q9V2T3), THSB_HALSA  (Q9HNI0), THSB_METTH  (O26885), 
THSB_SACS2  (Q9V2T8), THSB_SACSH  (P28488), THSB_SULAC  (Q9V2T4), 
THSB_SULTO  (O24735), THSB_THEAC  (P48425), THSB_THEK1  (O24730), 
THSB_THEK8  (O24732), THSB_THEKO  (Q52500), THS_DESSY   (Q53546), 
THS_METJA   (Q58405), THS_METKA   (P50016), THS_METTL   (O93624), 
THS_PYRAB   (Q9V2Q7), THS_PYRHO   (O57762)
» more

UniProtKB/Swiss-Prot
False negative sequences		 9 sequences 

TCPG_THAWE  (Q9LKI7), TCPQL_HUMAN (A6NM43), TCPQM_HUMAN (Q96SF2), 

TCPQ_CAEBR  (A8X6I9), TCPQ_CAEEL  (Q9N358), TCPQ_CANAX  (P47828), 
TCPQ_SCHPO  (P78921), THSG_SACS2  (Q9V2T7), THSG_SACSH  (Q9HH21)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 2 sequences 

TCPA_AMBME  (P50157), TCPA_MESAU  (P86208)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			12 sequences
			


			
BGLL_ASPFC  (B0YB65), BGLL_ASPFU  (Q4WGT3), BGLL_NEOFI  (A1DCV5), 

			
FLOA_LISIN  (Q7AP31), FLOA_LISMF  (Q723S2), FLOA_LISMO  (Q92EP8), 
MPE1_YEAST  (P35728), NAL14_HUMAN (Q86W24), PRA11_HUMAN (O60813), 
RLMKL_PSEF5 (Q4KFI6), RLMKL_PSEPF (Q3KFC5), SAT_CHLCH   (Q3AQ83)


			
			» more
			


				
	

	

		PDB
[Detailed view]		
		
			63 PDB
			


			1A6D; 1A6E; 1Q2V; 1Q3Q; 1Q3R; 1Q3S; 3IYG; 3KTT; 4A0O; 4A0V; 4A0W; 4A13; 
			
				4B2T; 4V81; 4V8R; 4V94; 4XCD; 4XCG; 4XCI; 5GW4; 5GW5; 5UYX; 5UYZ; 6KRD; 
				6KRE; 6KS6; 6KS7; 6KS8; 6NR8; 6NR9; 6NRA; 6NRB; 6NRC; 6NRD; 6QB8; 6XHI; 
				6XHJ; 7LUM; 7LUP; 7NVL; 7NVM; 7NVN; 7NVO; 7TRG; 7TTN; 7TTT; 7TUB; 7WU7; 
				7WZ3; 7X0A; 7X0S; 7X0V; 7X3J; 7X3U; 7X6Q; 7X7Y; 7YLU; 7YLV; 7YLW; 7YLX; 
				7YLY; 8AJM; 8AJO
			
			

			» more