PROSITE entry PS00995
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General information about the entry
| Entry name [info] | TCP1_3 |
| Accession [info] | PS00995 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUN-1994 CREATED;
01-NOV-1995 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00610 |
Name and characterization of the entry
| Description [info] | Chaperonins TCP-1 signature 3. |
| Pattern [info] |
Q-[DEK]-x-x-[LIVMGTA]-[GA]-D-G-T. |
Numerical results [info]
| Total number of hits | 155 in 155 different sequences |
| Number of true positive hits | 143 in 143 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 12 in 12 different sequences |
| Number of false negative sequences | 9 |
| Number of 'partial' sequences | 2 |
| Precision (true positives / (true positives + false positives)) | 92.26 % |
| Recall (true positives / (true positives + false negatives)) | 94.08 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
143 sequences
TCPA_ARATH (P28769 ), TCPA_BOVIN (Q32L40 ), TCPA_CAEEL (P41988 ), TCPA_CRIGR (P18279 ), TCPA_DICDI (Q55BM4 ), TCPA_DROME (P12613 ), TCPA_ENCCU (Q8SSC9 ), TCPA_HUMAN (P17987 ), TCPA_MACFA (Q4R5G2 ), TCPA_MONDO (Q9XT06 ), TCPA_MOUSE (P11983 ), TCPA_PALPA (Q9W790 ), TCPA_RAT (P28480 ), TCPA_SCHMA (Q94757 ), TCPA_SCHPO (O94501 ), TCPA_TETPY (O15891 ), TCPA_YEAST (P12612 ), TCPB_ARATH (Q940P8 ), TCPB_BOVIN (Q3ZBH0 ), TCPB_CAEEL (P47207 ), TCPB_DICDI (Q54ES9 ), TCPB_HUMAN (P78371 ), TCPB_MACFA (Q4R6F8 ), TCPB_MESAU (P86245 ), TCPB_MOUSE (P80314 ), TCPB_RAT (Q5XIM9 ), TCPB_SCHPO (Q10147 ), TCPB_YEAST (P39076 ), TCPD_ARATH (Q9LV21 ), TCPD_ASHGO (Q75A36 ), TCPD_BOVIN (Q2T9X2 ), TCPD_CAEEL (P47208 ), TCPD_CANGA (Q6FQT2 ), TCPD_DEBHA (Q6BXF6 ), TCPD_DICDI (Q54CL2 ), TCPD_HUMAN (P50991 ), TCPD_KLULA (Q6CL82 ), TCPD_MOUSE (P80315 ), TCPD_OCHTR (Q9NB32 ), TCPD_PONAB (Q5R637 ), TCPD_RAT (Q7TPB1 ), TCPD_SCHPO (P50999 ), TCPD_TAKRU (P53451 ), TCPD_YARLI (Q6C100 ), TCPD_YEAST (P39078 ), TCPE1_AVESA (P40412 ), TCPE2_AVESA (P54411 ), TCPE_ARATH (O04450 ), TCPE_CAEEL (P47209 ), TCPE_DICDI (Q54TD3 ), TCPE_ENCCU (Q8SRP9 ), TCPE_HUMAN (P48643 ), TCPE_MACFA (Q4R6V2 ), TCPE_MOUSE (P80316 ), TCPE_PONAB (Q5RF02 ), TCPE_RAT (Q68FQ0 ), TCPE_SCHPO (Q9UTM4 ), TCPE_YEAST (P40413 ), TCPG_ARATH (Q84WV1 ), TCPG_BOVIN (Q3T0K2 ), TCPG_CAEEL (Q9N4J8 ), TCPG_DICDI (Q54TH8 ), TCPG_DROME (P48605 ), TCPG_ENCCU (Q8SR76 ), TCPG_HUMAN (P49368 ), TCPG_MOUSE (P80318 ), TCPG_OXYGR (O00782 ), TCPG_PIG (Q29068 ), TCPG_PONAB (Q5NVF9 ), TCPG_RAT (Q6P502 ), TCPG_SCHPO (O74341 ), TCPG_TETPY (P54408 ), TCPG_XENLA (P50143 ), TCPG_YEAST (P39077 ), TCPH_ARATH (Q9SF16 ), TCPH_BOVIN (Q2NKZ1 ), TCPH_CHICK (Q5ZJK8 ), TCPH_DICDI (Q54ER7 ), TCPH_ENCCU (Q8SR53 ), TCPH_HUMAN (Q99832 ), TCPH_MOUSE (P80313 ), TCPH_PLAF7 (O77323 ), TCPH_PONAB (Q5R5C8 ), TCPH_SCHPO (P87153 ), TCPH_TETPY (P54409 ), TCPH_TETTH (P54410 ), TCPH_YEAST (P42943 ), TCPQ_BOVIN (Q3ZCI9 ), TCPQ_CHICK (Q6EE31 ), TCPQ_DICDI (Q552J0 ), TCPQ_HUMAN (P50990 ), TCPQ_MACFA (Q4R5J0 ), TCPQ_MOUSE (P42932 ), TCPQ_PONAB (Q5RAP1 ), TCPQ_YEAST (P47079 ), TCPW_BOVIN (Q3T084 ), TCPW_HUMAN (Q92526 ), TCPW_MOUSE (Q61390 ), TCPZ_BOVIN (Q3MHL7 ), TCPZ_CAEEL (P46550 ), TCPZ_CHICK (Q5ZJ54 ), TCPZ_DICDI (Q76NU3 ), TCPZ_HUMAN (P40227 ), TCPZ_MOUSE (P80317 ), TCPZ_PIG (Q29236 ), TCPZ_PONAB (Q5RCD2 ), TCPZ_RABIT (O77622 ), TCPZ_SCHPO (O94515 ), TCPZ_YEAST (P39079 ), THS1_HALVD (O30561 ), THS2_HALVD (O30560 ), THS3_HALVD (Q9HHA2 ), THSA_AERPE (Q9YDK6 ), THSA_ARCFU (O28045 ), THSA_HALSA (Q9HN70 ), THSA_METTH (O26320 ), THSA_SACS2 (Q9V2S9 ), THSA_SACSH (P46219 ), THSA_SULAC (Q9V2T5 ), THSA_SULTO (O24734 ), THSA_THEAC (P48424 ), THSA_THEK1 (P61112 ), THSA_THEK8 (O24731 ), THSA_THEKO (P61111 ), THSB_AERPE (Q9YA66 ), THSB_ARCFU (O28821 ), THSB_DESMO (Q9V2T3 ), THSB_HALSA (Q9HNI0 ), THSB_METTH (O26885 ), THSB_SACS2 (Q9V2T8 ), THSB_SACSH (P28488 ), THSB_SULAC (Q9V2T4 ), THSB_SULTO (O24735 ), THSB_THEAC (P48425 ), THSB_THEK1 (O24730 ), THSB_THEK8 (O24732 ), THSB_THEKO (Q52500 ), THS_DESSY (Q53546 ), THS_METJA (Q58405 ), THS_METKA (P50016 ), THS_METTL (O93624 ), THS_PYRAB (Q9V2Q7 ), THS_PYRHO (O57762 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
9 sequences
TCPG_THAWE (Q9LKI7 ), TCPQL_HUMAN (A6NM43 ), TCPQM_HUMAN (Q96SF2 ), TCPQ_CAEBR (A8X6I9 ), TCPQ_CAEEL (Q9N358 ), TCPQ_CANAX (P47828 ), TCPQ_SCHPO (P78921 ), THSG_SACS2 (Q9V2T7 ), THSG_SACSH (Q9HH21 )» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
TCPA_AMBME (P50157 ), TCPA_MESAU (P86208 ) |
| UniProtKB/Swiss-Prot False positive sequences |
12 sequences
BGLL_ASPFC (B0YB65 ), BGLL_ASPFU (Q4WGT3 ), BGLL_NEOFI (A1DCV5 ), FLOA_LISIN (Q7AP31 ), FLOA_LISMF (Q723S2 ), FLOA_LISMO (Q92EP8 ), MPE1_YEAST (P35728 ), NAL14_HUMAN (Q86W24 ), PRA11_HUMAN (O60813 ), RLMKL_PSEF5 (Q4KFI6 ), RLMKL_PSEPF (Q3KFC5 ), SAT_CHLCH (Q3AQ83 )» more |
| PDB [Detailed view] |
45 PDB
1A6D; 1A6E; 1Q2V; 1Q3Q; 1Q3R; 1Q3S; 3IYG; 3KTT; 4A0O; 4A0V; 4A0W; 4A13; 4B2T; 4V81; 4V8R; 4V94; 4XCD; 4XCG; 4XCI; 5GW4; 5GW5; 5UYX; 5UYZ; 6KRD; 6KRE; 6KS6; 6KS7; 6KS8; 6NR8; 6NR9; 6NRA; 6NRB; 6NRC; 6NRD; 6QB8; 6XHI; 6XHJ; 7LUM; 7LUP; 7NVL; 7NVM; 7NVN; 7NVO; 8AJM; 8AJO » more |