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PROSITE entry PS01000


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General information about the entry

Entry name [info] SDH_CYT_1
Accession [info] PS01000
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-NOV-1997 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00767

Name and characterization of the entry

Description [info] Succinate dehydrogenase cytochrome b subunit signature 1.
Pattern [info] 
R-P-[LIVMT]-x(3)-[LIVM]-x(6)-[LIVMWPK]-x(4)-S-x(2)-H-R-x-[ST].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 24 in 24 different sequences
Number of true positive hits 24 in 24 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 4
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.71 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] heme(?) at position 11
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 24 sequences 

C560_BOVIN  (P35720), C560_CAEBR  (P41955), C560_CAEEL  (P41956), 

C560_CHOCR  (P48934), C560_CRIGR  (P70097), C560_CYACA  (P48935), 
C560_HUMAN  (Q99643), C560_MARPO  (P35721), C560_MOUSE  (Q9CZB0), 
C560_PIG(D0VWV4), C560_PORPU  (P80478), C560_RECAM  (P80481), 
DHSC_ASCSU  (P92506), DHSC_COXBU  (P51055), DHSC_ECO57  (P69055), 
DHSC_ECOLI  (P69054), DHSC_RICBR  (Q1RHB5), DHSC_RICFE  (Q4UKC1), 
DHSC_RICPR  (P41085), DHSC_RICTY  (Q68XP1), DHSC_SALTI  (P63726), 
DHSC_SALTY  (P63725), SDH3_YEAST  (P33421), SHH3_YEAST  (Q04487)
» more

UniProtKB/Swiss-Prot
False negative sequences		 4 sequences 

C560_DICDI  (Q8T2T5), DHSC_PARDE  (Q59659), DHSC_RICCN  (Q92J99), 

SDHC_MYCTU  (O53368)
» more

PDB
[Detailed view]		 49 PDB

1NEK; 1NEN; 1ZOY; 1ZP0; 2ACZ; 2WDQ; 2WDR; 2WDV; 2WP9; 2WS3; 2WU2; 2WU5; 3ABV; 3AE1; 3AE2; 3AE3; 3AE4; 3AE5; 3AE6; 3AE7; 3AE8; 3AE9; 3AEA; 3AEB; 3AEC; 3AED; 3AEE; 3AEF; 3AEG; 3SFD; 3SFE; 3VR8; 3VR9; 3VRA; 3VRB; 4YSX; 4YSY; 4YSZ; 4YT0; 4YTM; 4YTN; 4YTP; 4YXD; 5C2T; 5C3J; 6LO8; 6WU6; 7JZ2; 8GS8
» more