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Entry: PS01000

General information about the entry

Entry name [info] SDH_CYT_1
Accession [info] PS01000
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-NOV-1997 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00767

Name and characterization of the entry

Description [info] Succinate dehydrogenase cytochrome b subunit signature 1.
Pattern [info] 
R-P-[LIVMT]-x(3)-[LIVM]-x(6)-[LIVMWPK]-x(4)-S-x(2)-H-R-x-[ST].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 23 in 23 different sequences
Number of true positive hits 23 in 23 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 4
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.19 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] heme(?) at position 11
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 23 sequences 

C560_BOVIN  (P35720    ), C560_CAEBR  (P41955    ), C560_CAEEL  (P41956    ), 

C560_CHOCR  (P48934    ), C560_CRIGR  (P70097    ), C560_CYACA  (P48935    ), 
C560_HUMAN  (Q99643    ), C560_MARPO  (P35721    ), C560_MOUSE  (Q9CZB0    ), 
C560_PIG    (D0VWV4    ), C560_PORPU  (P80478    ), C560_RECAM  (P80481    ), 
DHSC_COXBU  (P51055    ), DHSC_ECO57  (P69055    ), DHSC_ECOLI  (P69054    ), 
DHSC_RICBR  (Q1RHB5    ), DHSC_RICFE  (Q4UKC1    ), DHSC_RICPR  (P41085    ), 
DHSC_RICTY  (Q68XP1    ), DHSC_SALTI  (P63726    ), DHSC_SALTY  (P63725    ), 
SDH3_YEAST  (P33421    ), SHH3_YEAST  (Q04487    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 4 sequences 

C560_DICDI  (Q8T2T5    ), DHSC_PARDE  (Q59659    ), DHSC_RICCN  (Q92J99    ), 

SDHC_MYCTU  (O53368    )
» more

PDB
[Detailed view]		 33 PDB

1NEK; 1NEN; 1ZOY; 1ZP0; 2ACZ; 2WDQ; 2WDR; 2WDV; 2WP9; 2WS3; 2WU2; 2WU5; 3ABV; 3AE1; 3AE2; 3AE3; 3AE4; 3AE5; 3AE6; 3AE7; 3AE8; 3AE9; 3AEA; 3AEB; 3AEC; 3AED; 3AEE; 3AEF; 3AEG; 3SFD; 3SFE; 4YTP; 4YXD
» more

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