PROSITE logo

PROSITE entry PS01001


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] SDH_CYT_2
Accession [info] PS01001
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-NOV-1997 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00767

Name and characterization of the entry

Description [info] Succinate dehydrogenase cytochrome b subunit signature 2.
Pattern [info] 
H-x(3)-[GA]-[LIVMT]-R-[HF]-[LIVMF]-x-[FYWM]-D-x-[GVA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.


Total number of hits 26 in 26 different sequences
Number of true positive hits 26 in 26 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 92.86 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] heme(?) at position 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 26 sequences 

C560_BOVIN  (P35720), C560_CAEBR  (P41955), C560_CAEEL  (P41956), 

C560_CHOCR  (P48934), C560_CRIGR  (P70097), C560_CYACA  (P48935), 
C560_HUMAN  (Q99643), C560_MARPO  (P35721), C560_MOUSE  (Q9CZB0), 
C560_PIG(D0VWV4), C560_PORPU  (P80478), C560_RECAM  (P80481), 
DHSC_ASCSU  (P92506), DHSC_COXBU  (P51055), DHSC_ECO57  (P69055), 
DHSC_ECOLI  (P69054), DHSC_PARDE  (Q59659), DHSC_RICBR  (Q1RHB5), 
DHSC_RICCN  (Q92J99), DHSC_RICFE  (Q4UKC1), DHSC_RICPR  (P41085), 
DHSC_RICTY  (Q68XP1), DHSC_SALTI  (P63726), DHSC_SALTY  (P63725), 
SDH3_YEAST  (P33421), SHH3_YEAST  (Q04487)
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

C560_DICDI  (Q8T2T5), SDHC_MYCTU  (O53368)


				
	

	

		PDB
[Detailed view]		
		
			48 PDB
			


			1NEK; 1NEN; 1ZOY; 1ZP0; 2ACZ; 2WDQ; 2WDR; 2WDV; 2WP9; 2WS3; 2WU5; 3ABV; 
			
				3AE1; 3AE2; 3AE3; 3AE4; 3AE5; 3AE6; 3AE7; 3AE8; 3AE9; 3AEA; 3AEB; 3AEC; 
				3AED; 3AEE; 3AEF; 3AEG; 3SFD; 3SFE; 3VR8; 3VR9; 3VRA; 3VRB; 4YSX; 4YSY; 
				4YSZ; 4YT0; 4YTM; 4YTN; 4YTP; 4YXD; 5C2T; 5C3J; 6LO8; 6WU6; 7JZ2; 8GS8
			
			

			» more