PROSITE logo

PROSITE entry PS01005


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS01005
Entry name [info] FORMATE_NITRITE_TP_1
Accession [info] PS01005
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-JUL-1998 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00769

Name and characterization of the entry

Description [info] Formate and nitrite transporters signature 1.
Pattern [info] 
[LIVMA]-[LIVMY]-x-G-[GSTA]-[DES]-L-[FI]-[TN]-[GS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 21 in 21 different sequences
Number of true positive hits 17 in 17 different sequences
Number of 'unknown' hits 0
Number of false positive hits 4 in 4 different sequences
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 80.95 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 17 sequences 

FDHC_METFO  (P35839), FDHC_METTF  (Q50568), FNT1_TOXGM  (A0A125YSC7), 

FNT2_TOXGM  (S8EXD2), FNT_ENTH1   (C4LWU5), FOCA_ECO57  (P0AC25), 
FOCA_ECOL6  (P0AC24), FOCA_ECOLI  (P0AC23), FOCA_HAEIN  (P43756), 
FOCB_ECOLI  (P77733), FOC_BACTU   (A0A1C4F9S9), NIRC_ECOLI  (P0AC26), 
NIRC_SALTY  (P25926), NIRC_SHIFL  (P0AC27), YHA8_YEAST  (P38750), 
YRHG_BACSU  (O05399), YWCJ_BACSU  (P39608)
» more

UniProtKB/Swiss-Prot
False positive sequences		 4 sequences 

SEM3E_CHICK (O42237), THADA_CANLF (A8C750), THADA_CHLAE (A8C752), 

THADA_HUMAN (Q6YHU6)
» more

PDB
[Detailed view]		 2 PDB

3KCU; 3KCV