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PROSITE entry PS01005
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General information about the entry
| Entry name [info] | FORMATE_NITRITE_TP_1 |
| Accession [info] | PS01005 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUN-1994 CREATED;
01-JUL-1998 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00769 |
Name and characterization of the entry
| Description [info] | Formate and nitrite transporters signature 1. |
| Pattern [info] |
[LIVMA]-[LIVMY]-x-G-[GSTA]-[DES]-L-[FI]-[TN]-[GS]. |
Numerical results [info]
| Total number of hits | 17 in 17 different sequences |
| Number of true positive hits | 13 in 13 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 4 in 4 different sequences |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 76.47 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
13 sequences
FDHC_METFO (P35839), FDHC_METTF (Q50568), FOCA_ECO57 (P0AC25), FOCA_ECOL6 (P0AC24), FOCA_ECOLI (P0AC23), FOCA_HAEIN (P43756), FOCB_ECOLI (P77733), NIRC_ECOLI (P0AC26), NIRC_SALTY (P25926), NIRC_SHIFL (P0AC27), YHA8_YEAST (P38750), YRHG_BACSU (O05399), YWCJ_BACSU (P39608)» more
|
| UniProtKB/Swiss-Prot False positive sequences |
4 sequences
SEM3E_CHICK (O42237), THADA_CANLF (A8C750), THADA_CHLAE (A8C752), THADA_HUMAN (Q6YHU6)» more |
| PDB [Detailed view] |
2 PDB
3KCU; 3KCV |