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PROSITE entry PS01005


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PURL: https://purl.expasy.org/prosite/signature/PS01005

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General information about the entry

Entry name [info] FORMATE_NITRITE_TP_1
Accession [info] PS01005
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-JUL-1998 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00769

Name and characterization of the entry

Description [info] Formate and nitrite transporters signature 1.
Pattern [info] 
[LIVMA]-[LIVMY]-x-G-[GSTA]-[DES]-L-[FI]-[TN]-[GS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 21 in 21 different sequences
Number of true positive hits 17 in 17 different sequences
Number of 'unknown' hits 0
Number of false positive hits 4 in 4 different sequences
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 80.95 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 17 sequences 

FDHC_METFO  (P35839), FDHC_METTF  (Q50568), FNT1_TOXGM  (A0A125YSC7), 

FNT2_TOXGM  (S8EXD2), FNT_ENTH1   (C4LWU5), FOCA_ECO57  (P0AC25), 
FOCA_ECOL6  (P0AC24), FOCA_ECOLI  (P0AC23), FOCA_HAEIN  (P43756), 
FOCB_ECOLI  (P77733), FOC_BACTU   (A0A1C4F9S9), NIRC_ECOLI  (P0AC26), 
NIRC_SALTY  (P25926), NIRC_SHIFL  (P0AC27), YHA8_YEAST  (P38750), 
YRHG_BACSU  (O05399), YWCJ_BACSU  (P39608)
» more

UniProtKB/Swiss-Prot
False positive sequences		 4 sequences 

SEM3E_CHICK (O42237), THADA_CANLF (A8C750), THADA_CHLAE (A8C752), 

THADA_HUMAN (Q6YHU6)
» more

PDB
[Detailed view]		 2 PDB

3KCU; 3KCV