Home  |  Contact
Entry: PS01026

General information about the entry

Entry name [info] PHOTOSYSTEM_I_PSAGK
Accession [info] PS01026
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-DEC-2004 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00786

Name and characterization of the entry

Description [info] Photosystem I psaG and psaK proteins signature.
Pattern [info] 
[GTND]-[FPMI]-x-[LIVMH]-x-[DEAT]-x(2)-[GA]-x-[GTAM]-[STA]-x-G-H-x-[LIVM]-
[GAS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 25 in 25 different sequences
Number of true positive hits 25 in 25 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 6
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 25 sequences 

PSAG_ARATH  (Q9S7N7    ), PSAG_CHLRE  (P14224    ), PSAG_HORVU  (Q00327    ), 

PSAG_SPIOL  (P12357    ), PSAG_SYNRU  (Q9SPM4    ), PSAK1_SYNY3 (P72712    ), 
PSAK2_NOSS1 (Q8YLK8    ), PSAK2_SYNY3 (P74564    ), PSAK_ARATH  (Q9SUI5    ), 
PSAK_CHLRE  (P14225    ), PSAK_CYACA  (O19902    ), PSAK_GALSU  (P31567    ), 
PSAK_GRATL  (Q6B8M4    ), PSAK_GUITH  (O78444    ), PSAK_HORVU  (P36886    ), 
PSAK_MASLA  (Q9S3W9    ), PSAK_MEDSA  (Q9ZT05    ), PSAK_NOSP7  (B2IWT4    ), 
PSAK_PORPU  (P51370    ), PSAK_PYRYE  (Q1XDB7    ), PSAK_SYNEL  (P0A426    ), 
PSAK_SYNPW  (A5GL35    ), PSAK_SYNPX  (Q7U6P8    ), PSAK_THEEB  (P0A425    ), 
PSAK_THEVL  (P23318    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 6 sequences 

PSAG_CUCSA  (P42049    ), PSAG_PEA    (P20120    ), PSAK_CUCSA  (P42051    ), 

PSAK_PEA    (P17226    ), PSAK_SPIOL  (P14627    ), PSAK_TRIV2  (P23317    )
» more

PDB
[Detailed view]		 23 PDB

1JB0; 2O01; 2WSC; 2WSE; 2WSF; 3LW5; 3PCQ; 4FE1; 4KT0; 4L6V; 4RKU; 4XK8; 5L8R; 5ZF0; 6HQB; 6IJJ; 6IJO; 6JO5; 6JO6; 6K33; 6NWA; 6PFY; 6PGK
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission