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PROSITE entry PS01026


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General information about the entry

Entry name [info] PHOTOSYSTEM_I_PSAGK
Accession [info] PS01026
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-DEC-2004 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00786

Name and characterization of the entry

Description [info] Photosystem I psaG and psaK proteins signature.
Pattern [info] 
[GTND]-[FPMI]-x-[LIVMH]-x-[DEAT]-x(2)-[GA]-x-[GTAM]-[STA]-x-G-H-x-[LIVM]-
[GAS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 26 in 26 different sequences
Number of true positive hits 25 in 25 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 0
Number of 'partial' sequences 6
Precision (true positives / (true positives + false positives)) 96.15 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 25 sequences 

PSAG_ARATH  (Q9S7N7), PSAG_CHLRE  (P14224), PSAG_HORVU  (Q00327), 

PSAG_SPIOL  (P12357), PSAG_SYNRU  (Q9SPM4), PSAK1_SYNY3 (P72712), 
PSAK2_NOSS1 (Q8YLK8), PSAK2_SYNY3 (P74564), PSAK_ARATH  (Q9SUI5), 
PSAK_CHLRE  (P14225), PSAK_CYACA  (O19902), PSAK_GALSU  (P31567), 
PSAK_GRATL  (Q6B8M4), PSAK_GUITH  (O78444), PSAK_HORVU  (P36886), 
PSAK_MASLA  (Q9S3W9), PSAK_MEDSA  (Q9ZT05), PSAK_NEOYE  (Q1XDB7), 
PSAK_NOSP7  (B2IWT4), PSAK_PARMW  (Q7U6P8), PSAK_PORPU  (P51370), 
PSAK_SYNEL  (P0A426), PSAK_SYNPW  (A5GL35), PSAK_THEVB  (P0A425), 
PSAK_THEVL  (P23318)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 6 sequences 

PSAG_CUCSA  (P42049), PSAG_PEA(P20120), PSAK_CUCSA  (P42051), 

PSAK_PEA(P17226), PSAK_SPIOL  (P14627), PSAK_TRIV2  (P23317)
» more

UniProtKB/Swiss-Prot
False positive sequences		 1 sequence 

WSCD2_ARTBC (D4AUF4)


				
	

	

		PDB
[Detailed view]		
		
			51 PDB
			


			1JB0; 2O01; 2WSC; 2WSE; 2WSF; 3LW5; 3PCQ; 4FE1; 4KT0; 4L6V; 4RKU; 4XK8; 
			
				5L8R; 5ZF0; 6HQB; 6IJJ; 6IJO; 6JO5; 6JO6; 6K33; 6NWA; 6PFY; 6PGK; 6TRA; 
				6TRC; 6TRD; 6UZV; 7BGI; 7BLX; 7BW2; 7D0J; 7DZ7; 7DZ8; 7EW6; 7EWK; 7F9O; 
				7FIX; 7M75; 7M76; 7M78; 7O01; 7O1V; 7R3K; 7UMH; 7WFD; 7WFE; 7WG5; 7ZQ9; 
				7ZQC; 7ZQD; 8H2U
			
			

			» more