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PROSITE entry PS01031


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS01031
Entry name [info] SHSP
Accession [info] PS01031
Entry type [info] MATRIX
Date [info] 01-JUN-1994 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00791
Associated ProRule [info] PRU00285

Name and characterization of the entry

Description [info] Small heat shock protein (sHSP) domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=111;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=111;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.9372208; R2=0.0204281; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=346; N_SCORE=10.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=175; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Post-processing [info]

COMPETES_HIT_WITH PS51203

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 390 in 387 different sequences
Number of true positive hits 390 in 387 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 7
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] sHSP
Version [info] 6

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
387 sequences

18K1_MYCAV  (P46729), 18K1_MYCIT  (P46730), 18K2_MYCAV  (P46731), 
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UniProtKB/Swiss-Prot
'Partial' sequences
7 sequences

CRYAB_COLLI (O12987), CRYAB_EUDEL (O12991), CRYAB_TRASE (Q91518), 
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PDB
[Detailed view]
48 PDB

1GME; 1SHS; 2BOL; 2BYU; 2H50; 2H53; 2KLR; 2N0K; 2N3J; 2WJ5; 2WJ7; 2Y1Y;
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