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PROSITE entry PS01034


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General information about the entry

Entry name [info] GH16_1
Accession [info] PS01034
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-DEC-2001 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00794
Associated ProRule [info] PRU10064

Name and characterization of the entry

Description [info] Glycosyl hydrolases family 16 active sites.
Pattern [info]
E-[LIV]-D-[LIVF]-x(0,1)-E-x(2)-[GQ]-[KRNF]-x-[PSTA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 66 in 66 different sequences
Number of true positive hits 50 in 50 different sequences
Number of 'unknown' hits 0
Number of false positive hits 16 in 16 different sequences
Number of false negative sequences 27
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 75.76 %
Recall (true positives / (true positives + false negatives)) 64.94 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 1
Site [info] active_site at position 6
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
50 sequences

AGAR_STRCO  (P07883), CGKA_PSEVC  (P43478), E13B_NIACI  (P23903), 
EXOK_RHIME  (P33693), GUB_ACET2   (A3DBX3), GUB_ACETH   (Q84C00), 
GUB_BACAM   (P07980), GUB_BACLI   (P27051), GUB_BACSU   (P04957), 
GUB_BREBE   (P37073), GUB_FIBSS   (P17989), GUB_PAEMA   (P23904), 
GUB_PAEPO   (P45797), GUB_RHOMR   (P45798), PORA_ZOBGA  (D7GXG0), 
XTH12_ARATH (Q9FKL9), XTH13_ARATH (Q9FKL8), XTH14_ARATH (Q9ZSU4), 
XTH15_ARATH (Q38911), XTH16_ARATH (Q8LG58), XTH17_ARATH (O80803), 
XTH18_ARATH (Q9M0D2), XTH19_ARATH (Q9M0D1), XTH1_DIOKA  (G5DAC6), 
XTH1_SOLLC  (Q40144), XTH1_SOYBN  (Q39857), XTH20_ARATH (Q9FI31), 
XTH21_ARATH (Q9ZV40), XTH22_ARATH (Q38857), XTH23_ARATH (Q38910), 
XTH24_ARATH (P24806), XTH25_ARATH (Q38907), XTH26_ARATH (Q9SVV2), 
XTH2_DIOKA  (G5DAC7), XTH2_SOYBN  (P35694), XTH34_POPPZ (Q8GZD5), 
XTH4_ARATH  (Q39099), XTH5_ARATH  (Q9XIW1), XTH6_ARATH  (Q8LF99), 
XTH7_ARATH  (Q8LER3), XTH7_DIOKA  (A0A067XR63), XTH8_ARATH  (Q8L9A9), 
XTH8_DIOKA  (A0A067YMX8), XTH8_ORYSJ  (Q76BW5), XTHA_PHAAN  (Q41638), 
XTHB_PHAAN  (Q8LNZ5), XTH_BRAOB   (Q6YDN9), XTH_TOBAC   (P93349), 
XTH_WHEAT   (Q41542), XYND_RUMFL  (Q53317)
» more

UniProtKB/Swiss-Prot
False negative sequences
27 sequences

AGB34_AGAAL (A8W969), CFGA_TACTR  (Q27082), CRF1_ASPFU  (Q8J0P4), 
CRF2_ASPFU  (Q4WI46), CRH1_YEAST  (P53301), CRH2_YEAST  (P32623), 
CRR1_EREGS  (Q75A41), CRR1_YEAST  (Q05790), E13B_CRYAT  (C1IE32), 
EGLC_RHIME  (Q9Z3Q2), EXSH_RHIME  (O33680), GUB_ORPSP   (O14412), 
XTH10_ARATH (Q9ZVK1), XTH11_ARATH (Q9SMP1), XTH1_ARATH  (Q9SV61), 
XTH27_ARATH (Q8LDS2), XTH28_ARATH (Q38909), XTH29_ARATH (Q8L7H3), 
XTH2_ARATH  (Q9SV60), XTH30_ARATH (Q38908), XTH31_ARATH (P93046), 
XTH32_ARATH (Q9SJL9), XTH33_ARATH (Q8LC45), XTH3_ARATH  (Q9LJR7), 
XTH6_DIOKA  (A0A067XRK9), XTH9_ARATH  (Q8LDW9), YHZ7_SCHPO  (Q9USW3)
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

AGA34_AGAAL (P85974)

		
UniProtKB/Swiss-Prot
False positive sequences
16 sequences

4HYPE_ACIBT (A3M4A9), ADCK1_XENTR (Q5M7P6), ADCK5_HUMAN (Q3MIX3), 
ADCK5_MOUSE (Q80V03), C7345_ORYSJ (Q8LIF2), C89A9_ARATH (Q9SRQ1), 
CATA_ASPFU  (P78574), CY212_POSPM (F1SYH4), CY219_POSPM (F1SYI1), 
HR78_DROME  (Q24142), MMS1_YEAST  (Q06211), MNMG_MYCM1  (Q6KID6), 
MSHMT_AMISX (B2DEU8), MYSP_BRUMA  (Q01202), MYSP_CAEEL  (P10567), 
MYSP_ONCVO  (Q02171)
» more

PDB
[Detailed view]
24 PDB

1AJK; 1AJO; 1AXK; 1BYH; 1CPM; 1CPN; 1DYP; 1GBG; 1GLH; 1MAC; 1MVE; 1UMZ; 1UN1; 1ZM1; 2AYH; 2R49; 3AXD; 3AXE; 3D6E; 3H0O; 3HR9; 3O5S; 3WVJ; 4ATE
» more