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Entry: PS01040 |
Entry name [info] | SBP_BACTERIAL_5 |
Accession [info] | PS01040 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1995 CREATED;
01-JUL-1999 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00799 |
Description [info] | Bacterial extracellular solute-binding proteins, family 5 signature. |
Pattern [info] |
[AG]-x(6,7)-[DNEG]-x(2)-[STAIVE]-[LIVMFYWA]-x-[LIVMFY]-x-[LIVM]-[KR]- [KRHDE]-[GDN]-[LIVMA]-[KNGSP]-[FW]. |
Total number of hits | 44 in 44 different sequences |
Number of true positive hits | 44 in 44 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 16 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 73.33 % |
Taxonomic range [info] | Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
44 sequences
ALIA_STRPN (P35592 ), ALIB_STRPN (P0A4G0 ), ALIB_STRR6 (P0A4G1 ), AMIA_STRPN (P18791 ), APPA_BACSU (P42061 ), CNTA_STAA8 (Q2FVE7 ), CNTA_STAAM (A0A0H3JTL0), DDPA_ECOLI (P76128 ), DPPA_ECOLI (P23847 ), DPPE_BACSU (P26906 ), GSIB_ECO57 (Q8X6V9 ), GSIB_ECOK1 (A1A968 ), GSIB_ECOL5 (Q0TJL8 ), GSIB_ECOL6 (Q8CW88 ), GSIB_ECOLI (P75797 ), GSIB_ECOUT (Q1RE95 ), GSIB_SALCH (Q57RB1 ), GSIB_SHIBS (Q323W4 ), GSIB_SHIDS (Q32IB6 ), GSIB_SHIF8 (Q0T6D2 ), GSIB_SHIFL (Q821B3 ), GSIB_SHISS (Q3Z3V3 ), HBPA_HAEIN (P33950 ), MPPA_ECOLI (P77348 ), NIKA_ECOLI (P33590 ), OPPA_BACSU (P24141 ), OPPA_ECOLI (P23843 ), OPPA_HAEIN (P71370 ), OPPA_LACLA (Q9CEK0 ), OPPA_LACLL (Q07741 ), OPPA_LACLS (Q02VA9 ), OPPA_SALTY (P06202 ), SAPA_ECOLI (Q47622 ), SAPA_HAEIN (P45285 ), SAPA_SALTY (P36634 ), SARA_STRGC (P31306 ), UF71_DEIRA (Q9RU24 ), XP55_STRLI (P06109 ), Y1030_BRUAB (Q8VQK3 ), Y1049_BRUA2 (Q2YJK2 ), Y1090_BRUSU (Q8FUX2 ), Y210_BRUME (Q8YDG6 ), Y213_HAEIN (P44572 ), Y4TO_SINFN (P55669 )» more
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UniProtKB/Swiss-Prot False negative sequences |
16 sequences
AGPA_RHIME (Q9X4Y1 ), GSIB_PECAS (Q6D3B0 ), GSIB_SALPA (Q5PGP4 ), GSIB_SALTI (Q8Z863 ), GSIB_SALTY (Q8ZQM3 ), NIKA_STAA8 (Q2G2P5 ), Y1280_MYCTO (P9WGU4 ), Y1280_MYCTU (P9WGU5 ), Y1311_MYCBO (P66772 ), Y2948_BRUAB (Q577X5 ), Y3164_BRUA2 (Q2YKJ5 ), Y3576_BRUSU (Q8FW84 ), Y3691_BRUME (Q8YC41 ), Y4WM_SINFN (P55691 ), YGIS_ECOLI (Q46863 ), YHJP_BACSU (O07570 )» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
OPPA_LACLC (P0C2B3 ) |
PDB [Detailed view] |
73 PDB
1B05; 1B0H; 1B1H; 1B2H; 1B32; 1B3F; 1B3G; 1B3H; 1B3L; 1B40; 1B46; 1B4H; 1B4Z; 1B51; 1B52; 1B58; 1B5H; 1B5I; 1B5J; 1B6H; 1B7H; 1B9J; 1DPE; 1DPP; 1JET; 1JEU; 1JEV; 1OLA; 1OLC; 1QKA; 1QKB; 1RKM; 1UIU; 1UIV; 1UQW; 1XOC; 1ZLQ; 2NOO; 2OLB; 2RKM; 3DP8; 3E3K; 3MVW; 3MVX; 3MVY; 3MVZ; 3MW0; 3MZ9; 3MZB; 3O9P; 3QIM; 3TCF; 3TCG; 3TCH; 4DCX; 4DCY; 4I8C; 4I9D; 4TOZ; 5L8D; 5MWU; 5ON0; 5ON1; 5ON4; 5ON5; 5ON8; 5ON9; 5YH5; 5YH8; 5YHE; 5YHG; 6R4Q; 7A0C » more |