PROSITE entry PS01047
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry
Entry name [info] | HMA_1 |
Accession [info] | PS01047 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1995 CREATED;
01-APR-2006 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00804 |
Name and characterization of the entry
Description [info] | Heavy-metal-associated domain. |
Pattern [info] |
[LIVNS]-x-{L}-[LIVMFA]-x-C-x-[STAGCDNH]-C-x(3)-[LIVFG]-{LV}-x(2)-[LIV]- x(9,11)-[IVA]-x-[LVFYS]. |
Numerical results [info]
Total number of hits | 222 in 153 different sequences |
Number of true positive hits | 207 in 138 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 15 in 15 different sequences |
Number of false negative sequences | 63 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 93.24 % |
Recall (true positives / (true positives + false negatives)) | 76.67 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 6 |
Site [info] | metal(?) at position 6 |
Site [info] | metal(?) at position 9 |
Version [info] | 2 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
138 sequences
ATCS_SYNE7 (P37279 ), ATCS_SYNY3 (P73241 ), ATCU1_RHIME (P58341 ), ATCU2_RHIME (P58342 ), ATCU_SINMW (Q9X5X3 ), ATOX1_BOVIN (Q3T0E0 ), ATOX1_CANLF (Q9TT99 ), ATOX1_HUMAN (O00244 ), ATOX1_MOUSE (O08997 ), ATOX1_RAT (Q9WUC4 ), ATOX1_SHEEP (Q9XT28 ), ATP7A_CRIGR (P49015 ), ATP7A_HUMAN (Q04656 ), ATP7A_MOUSE (Q64430 ), ATP7A_RAT (P70705 ), ATP7B_HUMAN (P35670 ), ATP7B_MOUSE (Q64446 ), ATP7B_RAT (Q64535 ), ATP7B_SHEEP (Q9XT50 ), ATSY_SYNE7 (P37385 ), ATSY_SYNP6 (P07893 ), ATU2_SCHPO (O59666 ), ATU2_YEAST (P38995 ), ATX1_SCHPO (O74735 ), ATX1_YEAST (P38636 ), ATZN_SYNY3 (Q59998 ), CADA1_STAAU (P20021 ), CADA2_STAAU (P37386 ), CADA_ALKPO (P30336 ), CADA_BACSU (O32219 ), CADA_LISMN (Q60048 ), CADA_LISMO (P58414 ), CADA_STAAR (Q6GIX1 ), COPA1_HELPX (P77871 ), COPA2_HELPX (Q59467 ), COPA3_HELPX (O08462 ), COPA_ARCFU (O29777 ), COPA_BACSU (O32220 ), COPA_ECO57 (Q8XD24 ), COPA_ECOLI (Q59385 ), COPA_ENTHA (P32113 ), COPA_HELFC (O32619 ), COPA_HELPJ (Q9ZM69 ), COPA_HELPY (P55989 ), COPA_SALTI (Q8Z8S4 ), COPA_SALTY (Q8ZR95 ), COPA_STAA1 (A7X6S1 ), COPA_STAA2 (A6U4T8 ), COPA_STAA3 (Q2FDV0 ), COPA_STAA8 (Q2FV64 ), COPA_STAA9 (A5IVY3 ), COPA_STAAB (Q2YWA3 ), COPA_STAAC (Q5HCZ3 ), COPA_STAAE (A6QK47 ), COPA_STAAM (Q99R80 ), COPA_STAAN (Q7A3E6 ), COPA_STAAR (Q6GDP1 ), COPA_STAAS (Q6G6B7 ), COPA_STAAT (A8Z3F8 ), COPA_STAAW (Q8NUQ9 ), COPA_STAEQ (Q5HL56 ), COPA_STAES (Q8CN02 ), COPA_STAHJ (Q4L970 ), COPA_STAS1 (Q4A0G1 ), COPA_VIBCH (Q9KPZ7 ), COPA_YERPE (Q8ZCA7 ), COPP_HELFC (O32620 ), COPP_HELPJ (Q9ZM70 ), COPP_HELPY (Q48271 ), COPZ_ARCFU (O29901 ), COPZ_BACSU (O32221 ), COPZ_ENTHA (Q47840 ), COPZ_STAA1 (A7X6S3 ), COPZ_STAA2 (A6U4T9 ), COPZ_STAA3 (Q2FDU9 ), COPZ_STAA8 (Q2FV63 ), COPZ_STAA9 (A5IVY4 ), COPZ_STAAB (P0C885 ), COPZ_STAAC (Q5HCZ2 ), COPZ_STAAE (A6QK48 ), COPZ_STAAM (Q99R79 ), COPZ_STAAN (Q7A3E5 ), COPZ_STAAR (Q6GDP0 ), COPZ_STAAS (Q6G6B6 ), COPZ_STAAT (A8Z3F9 ), COPZ_STAAW (Q79ZY4 ), COPZ_STAEQ (Q5HL55 ), COPZ_STAES (Q8CN01 ), COPZ_STAHJ (Q4L971 ), COPZ_STAS1 (Q4A0G2 ), CTPA_MYCLE (P46839 ), CTPA_MYCTO (P9WPU0 ), CTPA_MYCTU (P9WPU1 ), CTPB_MYCBO (P59947 ), CTPB_MYCLE (P46840 ), CTPB_MYCTO (P9WPT8 ), CTPB_MYCTU (P9WPT9 ), FIXI_BRADU (Q59207 ), FIXI_RHILV (O33533 ), FIXI_RHIME (P18398 ), HIP24_ARATH (O81464 ), HIP45_ARATH (B3H6D0 ), HMA4_ORYSJ (Q6H7M3 ), HMA5_ARATH (Q9SH30 ), HMA5_ORYSJ (A3AWA4 ), HMA6_ARATH (Q9SZC9 ), HMA7_ARATH (Q9S7J8 ), HMA9_ORYSJ (A0A0P0X004), HMCT_HELPJ (Q9ZL53 ), HMCT_HELPY (Q59465 ), MEB2_ARATH (F4KFS7 ), MERA_ACICA (Q52109 ), MERA_ACIFR (P17239 ), MERA_ALCSP (P94188 ), MERA_BACCE (P16171 ), MERA_ENTAG (P94702 ), MERA_PSEAI (P00392 ), MERA_PSEFL (Q51772 ), MERA_SERMA (P08662 ), MERA_SHEPU (Q54465 ), MERA_SHIFL (P08332 ), MERA_STAAU (P0A0E5 ), MERA_STAES (P0A0E4 ), MERP_ACICA (Q52107 ), MERP_ALCSP (P94186 ), MERP_ENTAG (P0A217 ), MERP_ENTCL (P0A218 ), MERP_PSEAI (P04131 ), MERP_PSEFL (Q51770 ), MERP_SALTI (P0A216 ), MERP_SERMA (P13113 ), MERP_SHEPU (Q54463 ), MERP_SHIFL (P04129 ), Y290_HAEIN (P77868 ), Y291_HAEIN (P43979 ), Y292_HAEIN (O32622 ), ZNTA_ECOLI (P37617 ), ZNTA_SHISS (Q3YW59 )» more
|
UniProtKB/Swiss-Prot False negative sequences |
63 sequences
ATOX1_ARATH (Q94BT9 ), ATOX1_DICDI (Q54PZ2 ), ATU1_YEAST (P38360 ), CCH_ARATH (O82089 ), CCS1_ASHGO (Q75DD6 ), CCS1_CANGA (Q6FU61 ), CCS1_DEBHA (Q6BK66 ), CCS1_KLULA (Q6CIG2 ), CCS1_YARLI (Q6BZU2 ), CCS1_YEAST (P40202 ), CCS_ARATH (Q9LD47 ), CCS_DICDI (Q54F73 ), CCS_HUMAN (O14618 ), CCS_MOUSE (Q9WU84 ), CCS_ORYSJ (Q7XTY9 ), CCS_RAT (Q9JK72 ), HIP15_ARATH (Q9CAK6 ), HIP17_ARATH (Q9FVS0 ), HIP18_ARATH (Q9T0K9 ), HIP19_ARATH (A0JPW5 ), HIP1_ARATH (Q9ZUV1 ), HIP20_ARATH (Q9C9A3 ), HIP21_ARATH (Q9LF57 ), HIP22_ARATH (Q93VP2 ), HIP23_ARATH (O65657 ), HIP25_ARATH (O49613 ), HIP26_ARATH (Q9SZN7 ), HIP27_ARATH (Q67ZW1 ), HIP28_ARATH (F4IC29 ), HIP29_ARATH (Q9LP41 ), HIP2_ARATH (Q8GWS3 ), HIP30_ARATH (F4IQG4 ), HIP31_ARATH (Q84K70 ), HIP32_ARATH (Q9M8K5 ), HIP33_ARATH (F4JZL7 ), HIP34_ARATH (Q0WV37 ), HIP35_ARATH (Q9C7J6 ), HIP36_ARATH (Q84J88 ), HIP37_ARATH (A2RVM8 ), HIP39_ARATH (O03982 ), HIP3_ARATH (Q9FJH5 ), HIP41_ARATH (F4I1X0 ), HIP42_ARATH (Q9CAV5 ), HIP43_ARATH (Q9SFF7 ), HIP44_ARATH (F4JMB8 ), HIP4_ARATH (Q9SHQ8 ), HIP5_ARATH (Q9SJL2 ), HIP6_ARATH (Q9LZF1 ), HIP7_ARATH (Q9C5D3 ), HIP8_ARATH (Q9M8T7 ), HIP9_ARATH (Q9FLU5 ), HMA2_ARATH (Q9SZW4 ), HMA2_ORYSJ (A3BF39 ), HMA3A_ARATH (P0CW77 ), HMA3B_ARATH (P0CW78 ), HMA3_ORYSJ (Q8H384 ), HMA4_ARATH (O64474 ), HMCT_HELFE (Q9RQB4 ), NAKR1_ARATH (Q8LDS4 ), NAKR2_ARATH (Q58FZ0 ), NAKR3_ARATH (Q8RXH8 ), PI21_ORYSI (A2XT03 ), PI21_ORYSJ (Q7XL73 )» more |
UniProtKB/Swiss-Prot False positive sequences |
15 sequences
CSPL7_ORYSJ (Q6YT98 ), CYC6_GRATL (Q6B941 ), CYC6_LIMMA (P00118 ), CYC6_MICAE (P00112 ), DDX47_DROME (Q9VIF6 ), GPI7_YEAST (P40367 ), HMGB7_ARATH (Q8LDF9 ), NU5C_NEPOL (Q9TKV7 ), QRIC2_MOUSE (Q3V2A7 ), R32DT_HUMAN (Q8NI28 ), RECO_LEIXX (Q6AED5 ), SYFA_THEFY (Q47N75 ), UD2A3_HUMAN (Q6UWM9 ), UD2A3_PONAB (Q5RFJ3 ), YAB4_ARATH (Q9LDT3 )» more |
PDB [Detailed view] |
83 PDB
1AFI; 1AFJ; 1AW0; 1CC7; 1CC8; 1CPZ; 1FD8; 1FE0; 1FE4; 1FEE; 1FES; 1FVQ; 1FVS; 1JWW; 1K0V; 1KQK; 1KVI; 1KVJ; 1MWY; 1MWZ; 1OPZ; 1OQ3; 1OQ6; 1P6T; 1P8G; 1Q8L; 1S6O; 1S6U; 1TL4; 1TL5; 1Y3J; 1Y3K; 1YG0; 1YJR; 1YJT; 1YJU; 1YJV; 2AJ0; 2AJ1; 2AW0; 2EW9; 2G9O; 2GA7; 2GCF; 2GGP; 2HQI; 2K1R; 2KT2; 2KT3; 2LDI; 2LQ9; 2LQB; 2N7Y; 2OFG; 2OFH; 2QIF; 2RML; 2ROP; 2VOY; 2XMW; 3CJK; 3DXS; 3FRY; 3I9Z; 3IWL; 3IWX; 3K7R; 4A48; 4A4J; 4QOT; 4UMV; 4UMW; 4YDX; 4YEA; 5F0W; 5T7L; 5VDE; 5VDF; 6A71; 6A72; 6FF2; 7DC1; 7ZC3 » more |