PROSITE entry PS01065

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General information about the entry

Entry name [info]	ETF_BETA
Accession [info]	PS01065
Entry type [info]	PATTERN
Date [info]	01-NOV-1995 CREATED; 01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00816

Name and characterization of the entry

Description [info]	Electron transfer flavoprotein beta-subunit signature.
Pattern [info]	[IVAG]-x-[KR]-x(2)-[DE]-[GDE](2)-x(1,2)-[EQHF]-x-[LIV]-x(4)-P-x- [LIVM](2)-[TACS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.

Total number of hits	62 in 62 different sequences
Number of true positive hits	61 in 61 different sequences
Number of 'unknown' hits	0
Number of false positive hits	1
Number of false negative sequences	6
Number of 'partial' sequences	1

Precision (true positives / (true positives + false positives))	98.39 %
Recall (true positives / (true positives + false negatives))	91.04 %

Comments [info]

Taxonomic range [info]	Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	61 sequences CARD_ACEWD (H6LGM7), ETFB_ARATH (Q9LSW8), ETFB_BACSU (P94550), ETFB_BOVIN (Q2TBV3), ETFB_BRADU (P53575), ETFB_CLOAB (P52040), ETFB_DICDI (Q54YZ4), ETFB_HUMAN (P38117), ETFB_METME (P53570), ETFB_MOUSE (Q9DCW4), ETFB_MYCBO (P64098), ETFB_MYCLE (O33095), ETFB_MYCTO (P9WNG6), ETFB_MYCTU (P9WNG7), ETFB_ORYSI (A2XQV4), ETFB_ORYSJ (Q7F9U3), ETFB_PARDE (P38975), ETFB_PIG(Q6UAQ8), ETFB_PONAB (Q5RFK0), ETFB_PSEAE (Q9HZP6), ETFB_RAT(Q68FU3), ETFB_SCHPO (Q9UTH2), ETFB_THETC (P97089), ETFB_YEAST (P42940), FIXA_AZOC5 (P26482), FIXA_AZOVI (P53576), FIXA_BRADU (P53577), FIXA_ECO24 (A7ZHD4), FIXA_ECO27 (B7UI87), FIXA_ECO45 (B7MAG4), FIXA_ECO55 (B7L4G4), FIXA_ECO57 (P60567), FIXA_ECO7I (B7NHE5), FIXA_ECO81 (B7MNP8), FIXA_ECO8A (B7M0D8), FIXA_ECOBW (C4ZPW7), FIXA_ECODH (B1XBG6), FIXA_ECOHS (A7ZVZ3), FIXA_ECOL5 (Q0TLU8), FIXA_ECOL6 (Q8FLA3), FIXA_ECOLC (B1IRD5), FIXA_ECOLI (P60566), FIXA_ECOLU (B7N7R6), FIXA_ECOSE (B6HYZ2), FIXA_ECOSM (B1LFX5), FIXA_ESCF3 (B7LWN2), FIXA_RHILP (Q05559), FIXA_RHIME (P09818), FIXA_SALA4 (B5F756), FIXA_SALDC (B5FHH0), FIXA_SALG2 (B5RGA8), FIXA_SALNS (B4T6K2), FIXA_SALPA (Q5PIN4), FIXA_SALPB (A9MYK3), FIXA_SALPK (B5BL59), FIXA_SALTI (Q8Z9L0), FIXA_SALTY (Q8ZRX0), FIXA_SHIF8 (Q0T8F3), FIXA_SHIFL (P59673), FIXA_SINFN (Q53210), YDIQ_ECOLI (P76201) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	6 sequences ETFB_ANAPI (G3KIM7), ETFB_CHRSD (Q1QYV8), ETFB_MEGEL (O85691), ETFB_SYNWW (Q0AZ34), LCTB_ACEWD (H6LBB0), YGCR_ECOLI (Q46908) » more
UniProtKB/Swiss-Prot 'Partial' sequences	1 sequence FIXA_RHILE (P14313)
UniProtKB/Swiss-Prot False positive sequences	1 sequence PPIH_GIBZE (Q4IPH4)
PDB [Detailed view]	14 PDB 1EFP; 1EFV; 1O94; 1O95; 1O96; 1O97; 1T9G; 2A1T; 2A1U; 3CLR; 3CLS; 3CLT; 3CLU; 6FAH » more