PROSITE entry PS01065

View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission

General information about the entry

Entry name [info]	ETF_BETA
Accession [info]	PS01065
Entry type [info]	PATTERN
Date [info]	01-NOV-1995 CREATED; 01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00816

Name and characterization of the entry

Description [info]	Electron transfer flavoprotein beta-subunit signature.
Pattern [info]	[IVAG]-x-[KR]-x(2)-[DE]-[GDE](2)-x(1,2)-[EQHF]-x-[LIV]-x(4)-P-x- [LIVM](2)-[TACS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.

Total number of hits	62 in 62 different sequences
Number of true positive hits	61 in 61 different sequences
Number of 'unknown' hits	0
Number of false positive hits	1
Number of false negative sequences	6
Number of 'partial' sequences	1

Precision (true positives / (true positives + false positives))	98.39 %
Recall (true positives / (true positives + false negatives))	91.04 %

Comments [info]

Taxonomic range [info]	Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	61 sequences CARD_ACEWD (H6LGM7), ETFB_ARATH (Q9LSW8), ETFB_BACSU (P94550), ETFB_BOVIN (Q2TBV3), ETFB_BRADU (P53575), ETFB_CLOAB (P52040), ETFB_DICDI (Q54YZ4), ETFB_HUMAN (P38117), ETFB_METME (P53570), ETFB_MOUSE (Q9DCW4), ETFB_MYCBO (P64098), ETFB_MYCLE (O33095), ETFB_MYCTO (P9WNG6), ETFB_MYCTU (P9WNG7), ETFB_ORYSI (A2XQV4), ETFB_ORYSJ (Q7F9U3), ETFB_PARDE (P38975), ETFB_PIG(Q6UAQ8), ETFB_PONAB (Q5RFK0), ETFB_PSEAE (Q9HZP6), ETFB_RAT(Q68FU3), ETFB_SCHPO (Q9UTH2), ETFB_THETC (P97089), ETFB_YEAST (P42940), FIXA_AZOC5 (P26482), FIXA_AZOVI (P53576), FIXA_BRADU (P53577), FIXA_ECO24 (A7ZHD4), FIXA_ECO27 (B7UI87), FIXA_ECO45 (B7MAG4), FIXA_ECO55 (B7L4G4), FIXA_ECO57 (P60567), FIXA_ECO7I (B7NHE5), FIXA_ECO81 (B7MNP8), FIXA_ECO8A (B7M0D8), FIXA_ECOBW (C4ZPW7), FIXA_ECODH (B1XBG6), FIXA_ECOHS (A7ZVZ3), FIXA_ECOL5 (Q0TLU8), FIXA_ECOL6 (Q8FLA3), FIXA_ECOLC (B1IRD5), FIXA_ECOLI (P60566), FIXA_ECOLU (B7N7R6), FIXA_ECOSE (B6HYZ2), FIXA_ECOSM (B1LFX5), FIXA_ESCF3 (B7LWN2), FIXA_RHILP (Q05559), FIXA_RHIME (P09818), FIXA_SALA4 (B5F756), FIXA_SALDC (B5FHH0), FIXA_SALG2 (B5RGA8), FIXA_SALNS (B4T6K2), FIXA_SALPA (Q5PIN4), FIXA_SALPB (A9MYK3), FIXA_SALPK (B5BL59), FIXA_SALTI (Q8Z9L0), FIXA_SALTY (Q8ZRX0), FIXA_SHIF8 (Q0T8F3), FIXA_SHIFL (P59673), FIXA_SINFN (Q53210), YDIQ_ECOLI (P76201) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	6 sequences ETFB_ANAPI (G3KIM7), ETFB_CHRSD (Q1QYV8), ETFB_MEGEL (O85691), ETFB_SYNWW (Q0AZ34), LCTB_ACEWD (H6LBB0), YGCR_ECOLI (Q46908) » more
UniProtKB/Swiss-Prot 'Partial' sequences	1 sequence FIXA_RHILE (P14313)
UniProtKB/Swiss-Prot False positive sequences	1 sequence PPIH_GIBZE (Q4IPH4)
PDB [Detailed view]	14 PDB 1EFP; 1EFV; 1O94; 1O95; 1O96; 1O97; 1T9G; 2A1T; 2A1U; 3CLR; 3CLS; 3CLT; 3CLU; 6FAH » more