PROSITE entry PS01074

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General information about the entry

Entry name [info]	TERPENE_SYNTHASES
Accession [info]	PS01074
Entry type [info]	PATTERN
Date [info]	01-NOV-1995 CREATED; 01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00825

Name and characterization of the entry

Description [info]	Terpene synthases signature.
Pattern [info]	[DE]-G-S-W-x-[GE]-x-W-[GA]-[LIVM]-x-[FY]-x-Y-[GA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.

Total number of hits	72 in 72 different sequences
Number of true positive hits	72 in 72 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	7
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	91.14 %

Comments [info]

Taxonomic range [info]	Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

72 sequences

ABAMS_PEA   (Q9LRH7), ACBSY_ORYSJ (Q2R712), BAMS1_BARVU (A0A0U2U4F3),

BAMS1_PANGI (O82140), BAMS2_PANGI (O82146), BAMS_BETPL  (Q8W3Z1), 
BAMS_GLYGL  (Q9MB42), BAMS_PEA(Q9LRH8), BAMS_SOLLC  (E7DN63), 
BARS1_ARATH (O23390), BASM1_KALSE (A0A0S2IHL6), CAS1_ARATH  (P38605), 
CAS1_BETPL  (Q8W3Z4), CAS1_CUCPE  (Q6BE25), CAS1_DICDI  (Q55D85), 
CAS1_GLYGL  (Q9SXV6), CAS1_LUFAE  (Q9SLP9), CAS1_PANGI  (O82139), 
CAS1_RICCO  (Q2XPU6), CAS2_BETPL  (Q8W3Z3), CASS_KALDA  (E2IUB0), 
CAS_ORYSJ   (Q6Z2X6), CUCS_CUCPE  (Q6BE24), CUCS_SIRGR  (K7NBZ9), 
DADIS_PANGI (Q08IT1), DAMS_SOLLC  (E7DN64), ERG7A_ASPFU (Q4WES9), 
ERG7B_ASPFU (Q4WQ95), ERG7_CANAL  (Q04782), ERG7_PNECA  (Q96WJ0), 
ERG7_SCHPO  (Q10231), ERG7_YEAST  (P38604), FRIES_KALDA (E2IUA8), 
IMFS_LUFAE  (Q948R6), LAS1_ARATH  (Q1G1A4), LCA_LYCCL   (A0A125SXN3), 
LCC_LYCCL   (A0A125SXN1), LCD_LYCCL   (A0A125SXN2), LSS_BOVIN   (P84466), 
LSS_HUMAN   (P48449), LSS_MOUSE   (Q8BLN5), LSS_RAT (P48450), 
LUP1_ARATH  (Q9C5M3), LUP2_ARATH  (Q8RWT0), LUP4_ARATH  (B6EXY6), 
LUP5_ARATH  (Q9FZI2), LUPS_BETPL  (Q8W3Z2), LUPS_GLYGL  (Q764T8), 
LUPS_KALDA  (E2IUA9), LUPS_RICCO  (Q2XPU7), OSC1_AZAIN  (A0A5B8NBN0), 
OSC1_CITSI  (A0A067ECN5), OSC1_MELAZ  (A0A5B8NBE6), OSC2_AILAL  (P0DXI2), 
OSC2_CITSI  (A0A067FI21), OSC3_AILAL  (P0DXI1), OSC3_CITSI  (A0A067DDU9), 
OXSC_CUCPE  (Q6BE23), PAKSY_ORYSJ (H2KWF1), PEN1_ARATH  (Q9FR95), 
PEN3_ARATH  (Q9LVY2), PEN4_ARATH  (Q9FI37), PEN5_ARATH  (Q9FJV8), 
PEN6_ARATH  (Q9SYN1), PEN7_ARATH  (Q9LS68), SHS1_ASTTA  (F8WQD0), 
SQHC_ALIAD  (P33247), SQHC_BRADU  (P54924), SQHC_SINFN  (P55348), 
SQHC_ZYMMO  (P33990), STBOS_STERE (B9X0J1), TARS_KALDA  (E2IUA6)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

7 sequences

GLUTS_KALDA (E2IUA7), HELA_ASPFU  (Q4WR16), LUP3_ARATH  (P0C8Y0),

PDSA_ARTGP  (E4V6I8), PDSA_ASPFC  (B0Y5B4), PDSA_NEOFI  (A1CVK0), 
SQHC_BACSU  (Q796C3)

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PDB
[Detailed view]

18 PDB

1GSZ; 1H35; 1H36; 1H37; 1H39; 1H3A; 1H3B; 1H3C; 1O6H; 1O6Q; 1O6R; 1O79; 1SQC; 1UMP; 1W6J; 1W6K; 2SQC; 3SQC
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