PROSITE entry PS01079

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General information about the entry

PURL [info]	https://purl.expasy.org/prosite/signature/PS01079
Entry name [info]	MOCF_BIOSYNTHESIS_2
Accession [info]	PS01079
Entry type [info]	PATTERN
Date [info]	01-NOV-1995 CREATED; 01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00828

Name and characterization of the entry

Description [info]	Molybdenum cofactor biosynthesis proteins signature 2.
Pattern [info]	S-x-[GS]-x(2)-D-x(5)-[LIVW]-x(10,12)-[LIV]-x(2)-[KR]-P-G-[KRL]-P-x(2)- [LIVMF]-[GA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.

Total number of hits	13 in 13 different sequences
Number of true positive hits	13 in 13 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	7
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	65.00 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

13 sequences

CIN_DROME   (P39205), CNX1_ARATH  (Q39054), GEPH_HUMAN  (Q9NQX3),

GEPH_MOUSE  (Q8BUV3), GEPH_RAT(Q03555), MOEA_ECOLI  (P12281), 
MOEA_HAEIN  (P45210), MOEA_NOSS1  (Q44243), MOEA_SALTY  (Q56066), 
MOEA_SYNE7  (Q56207), MOEA_SYNY3  (Q55368), Y666_METJA  (Q58080), 
Y886_METJA  (Q58296)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

7 sequences

GEPH_CHICK  (Q9PW38), GEPH_DICDI  (Q54KM0), MOEA1_MYCTO (P9WJQ6),

MOEA1_MYCTU (P9WJQ7), MOEA2_MYCTO (P9WJQ4), MOEA2_MYCTU (P9WJQ5), 
MOEA_BACSU  (O31703)

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PDB
[Detailed view]

44 PDB

1FC5; 1G8L; 1G8R; 1T3E; 2FTS; 2FU3; 2NQK; 2NQM; 2NQN; 2NQQ; 2NQR; 2NQS; 2NQU; 2NQV; 2NRP; 2NRS; 4PD0; 4PD1; 4TK1; 4TK2; 4TK3; 4TK4; 4U90; 4U91; 5ERQ; 5ERR; 5ERS; 5ERT; 5ERU; 5ERV; 5G2R; 5G2S; 6ETD; 6ETF; 6ETH; 6FGC; 6FGD; 6GB4; 6GB9; 6GBC; 6GBF; 6HSN; 6HSO; 6RMS
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