PROSITE entry PS01079

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PURL: https://purl.expasy.org/prosite/signature/PS01079

Direct ScanProsite submission

General information about the entry

Entry name [info]	MOCF_BIOSYNTHESIS_2
Accession [info]	PS01079
Entry type [info]	PATTERN
Date [info]	01-NOV-1995 CREATED; 01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00828

Name and characterization of the entry

Description [info]	Molybdenum cofactor biosynthesis proteins signature 2.
Pattern [info]	S-x-[GS]-x(2)-D-x(5)-[LIVW]-x(10,12)-[LIV]-x(2)-[KR]-P-G-[KRL]-P-x(2)- [LIVMF]-[GA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.

Total number of hits	13 in 13 different sequences
Number of true positive hits	13 in 13 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	7
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	65.00 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

13 sequences

CIN_DROME   (P39205), CNX1_ARATH  (Q39054), GEPH_HUMAN  (Q9NQX3),

GEPH_MOUSE  (Q8BUV3), GEPH_RAT(Q03555), MOEA_ECOLI  (P12281), 
MOEA_HAEIN  (P45210), MOEA_NOSS1  (Q44243), MOEA_SALTY  (Q56066), 
MOEA_SYNE7  (Q56207), MOEA_SYNY3  (Q55368), Y666_METJA  (Q58080), 
Y886_METJA  (Q58296)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

7 sequences

GEPH_CHICK  (Q9PW38), GEPH_DICDI  (Q54KM0), MOEA1_MYCTO (P9WJQ6),

MOEA1_MYCTU (P9WJQ7), MOEA2_MYCTO (P9WJQ4), MOEA2_MYCTU (P9WJQ5), 
MOEA_BACSU  (O31703)

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PDB
[Detailed view]

44 PDB

pdb_00001fc5; pdb_00001g8l; pdb_00001g8r; pdb_00001t3e; pdb_00002fts; pdb_00002fu3; pdb_00002nqk; pdb_00002nqm; pdb_00002nqn; pdb_00002nqq; pdb_00002nqr; pdb_00002nqs; pdb_00002nqu; pdb_00002nqv; pdb_00002nrp; pdb_00002nrs; pdb_00004pd0; pdb_00004pd1; pdb_00004tk1; pdb_00004tk2; pdb_00004tk3; pdb_00004tk4; pdb_00004u90; pdb_00004u91; pdb_00005erq; pdb_00005err; pdb_00005ers; pdb_00005ert; pdb_00005eru; pdb_00005erv; pdb_00005g2r; pdb_00005g2s; pdb_00006etd; pdb_00006etf; pdb_00006eth; pdb_00006fgc; pdb_00006fgd; pdb_00006gb4; pdb_00006gb9; pdb_00006gbc; pdb_00006gbf; pdb_00006hsn; pdb_00006hso; pdb_00006rms
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