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Entry: PS01081 |
Entry name [info] | HTH_TETR_1 |
Accession [info] | PS01081 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE; 22-FEB-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00830 |
Description [info] | TetR-type HTH domain signature. |
Pattern [info] |
[GS]-[LIVMFYSP]-x(2,3)-[TS]-[LIVMTA]-x(2)-[LIVM]-x(5)-[LIVQSA]- [STAGENQH]-x-[GPART]-x-[LIVMFA]-[FYSTNRH]-x-[HFYRA]-[FVW]-x-[DNSTKAG]- [KQMT]-x(2,3)-[LIVM]. |
Total number of hits | 224 in 224 different sequences |
Number of true positive hits | 224 in 224 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 149 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 60.05 % |
Taxonomic range [info] | Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
224 sequences
ACRR_ECOL6 (P0ACT0 ), ACRR_ECOLI (P0ACS9 ), ACRR_SHIFL (P0ACT1 ), ARPR_PSEPU (Q9KJC4 ), BDCR_ECOLI (P39334 ), BEPR_BRUSU (Q8G2M8 ), BETI1_CHRSD (Q1QXD9 ), BETI2_CHRSD (Q9L4K2 ), BETI_AGRFC (Q8UH57 ), BETI_BRUA2 (Q2YMS6 ), BETI_BRUA4 (A6X2G6 ), BETI_BRUAB (Q57EH9 ), BETI_BRUC2 (A9M9H9 ), BETI_BRUMB (C0RHQ4 ), BETI_BRUME (Q8YFY3 ), BETI_BRUSI (B0CKN5 ), BETI_BRUSU (Q8G1Z7 ), BETI_BURA4 (B1Z032 ), BETI_BURCH (A0B2F5 ), BETI_BURCJ (B4EHJ0 ), BETI_BURCM (Q0B713 ), BETI_BURL3 (Q39A42 ), BETI_BURM1 (A9AN01 ), BETI_BURM7 (A3MEC5 ), BETI_BURM9 (A2RWD7 ), BETI_BURMA (Q62CH6 ), BETI_BURO0 (B1K709 ), BETI_BURO1 (Q1BQE0 ), BETI_BURP0 (A3P6A9 ), BETI_BURP1 (Q3JLL9 ), BETI_BURP6 (A3NKP7 ), BETI_BURPS (Q63KK9 ), BETI_BURTA (Q2T6C8 ), BETI_BURVG (A4JJG4 ), BETI_CROS8 (A7MFA6 ), BETI_ECO24 (A7ZI52 ), BETI_ECO27 (B7UJG6 ), BETI_ECO45 (B7MCD2 ), BETI_ECO55 (B7L442 ), BETI_ECO57 (Q8X6C3 ), BETI_ECO5E (B5Z1R2 ), BETI_ECO7I (B7NK49 ), BETI_ECO8A (B7M2V7 ), BETI_ECODH (B1XET8 ), BETI_ECOHS (A7ZWV6 ), BETI_ECOL5 (Q0TKV9 ), BETI_ECOL6 (Q8FKI7 ), BETI_ECOLC (B1J0W4 ), BETI_ECOLI (P17446 ), BETI_ECOLU (B7N8L5 ), BETI_ECOSE (B6I093 ), BETI_ECOSM (B1LIJ9 ), BETI_ECOUT (Q1RFM1 ), BETI_KLEP3 (B5Y006 ), BETI_PARP8 (B2JS87 ), BETI_PARPJ (B2TCK0 ), BETI_PARXL (Q13NG5 ), BETI_PECAS (Q6D6E1 ), BETI_PECCP (C6DKY6 ), BETI_PROMH (B4EX96 ), BETI_PSE14 (Q48CM5 ), BETI_PSEA7 (A6VEI5 ), BETI_PSEA8 (B7V5R5 ), BETI_PSEAB (Q02DY8 ), BETI_PSEAE (Q9HTJ0 ), BETI_PSEF5 (Q4K4K9 ), BETI_PSEFS (C3K3D1 ), BETI_PSEMY (A4XPI7 ), BETI_PSEPF (Q3K5H5 ), BETI_PSESM (Q88AF0 ), BETI_PSEU2 (Q4ZM61 ), BETI_RHILO (Q985M2 ), BETI_SERP5 (A8GBX7 ), BETI_SHIF8 (Q0T7M8 ), BETI_VIBA3 (B7VQ27 ), BETI_VIBC1 (A7N212 ), BETI_VIBPA (Q87H51 ), BETI_VIBVU (Q8D3K4 ), BETI_VIBVY (Q7MF14 ), BETI_YERP3 (A7FKL4 ), BETI_YERPA (Q1C930 ), BETI_YERPB (B2K8U6 ), BETI_YERPE (Q8ZGV8 ), BETI_YERPN (Q1CFR9 ), BETI_YERPP (A4TNP0 ), BETI_YERPS (Q66D52 ), BM3R1_PRIMG (P43506 ), CECR_ECOLI (P0ACU0 ), CECR_SHIFL (P0ACU1 ), CHLER_MYCTO (P9WMD2 ), CHLER_MYCTU (P9WMD3 ), ENVR_ECO57 (P0ACT3 ), ENVR_ECOLI (P0ACT2 ), FATR_BACSU (O08335 ), HTHR_MYCBO (P67443 ), HTHR_MYCTO (P9WMC2 ), HTHR_MYCTU (P9WMC3 ), MEPR_PSEPU (P0C068 ), MTRR_NEIGO (P39897 ), PKSA_BACSU (O34381 ), QACR_STAAM (P0A0N3 ), QACR_STAAU (P0A0N4 ), QACR_STAHA (P0A0N5 ), SLMA_ACTP2 (A3N3Q5 ), SLMA_ACTP7 (B3H337 ), SLMA_ACTPJ (B0BTZ2 ), SLMA_CITK8 (A8ARM8 ), SLMA_CROS8 (A7MQB0 ), SLMA_ECO24 (A7ZTJ2 ), SLMA_ECO27 (B7UM47 ), SLMA_ECO45 (B7MFK2 ), SLMA_ECO55 (B7L761 ), SLMA_ECO57 (Q8X580 ), SLMA_ECO5E (B5YWD9 ), SLMA_ECO7I (B7NQ02 ), SLMA_ECO81 (B7N282 ), SLMA_ECO8A (B7M4C6 ), SLMA_ECOBW (C4ZXN3 ), SLMA_ECODH (B1X975 ), SLMA_ECOHS (A8A6A3 ), SLMA_ECOK1 (A1AHH2 ), SLMA_ECOL5 (Q0TBG8 ), SLMA_ECOL6 (Q8FC86 ), SLMA_ECOLC (B1IYV9 ), SLMA_ECOLI (P0C093 ), SLMA_ECOLU (B7NEU5 ), SLMA_ECOSE (B6I3L8 ), SLMA_ECOSM (B1LK78 ), SLMA_EDWI9 (C5B9D1 ), SLMA_ENT38 (A4W508 ), SLMA_ERWT9 (B2VF78 ), SLMA_ESCF3 (B7LVK2 ), SLMA_GLAP5 (B8F853 ), SLMA_HAEDU (Q7VN48 ), SLMA_HAEI8 (Q4QLV2 ), SLMA_HAEIE (A5UDB3 ), SLMA_HAEIG (A5UI96 ), SLMA_HAEIN (P29280 ), SLMA_KLEP3 (B5XTG2 ), SLMA_KLEP7 (A6TFN2 ), SLMA_MANSM (Q65R67 ), SLMA_PECAS (Q6DAW0 ), SLMA_PECCP (C6DIC4 ), SLMA_PHOLL (Q7MY26 ), SLMA_PHOPR (Q6LVN6 ), SLMA_PROMH (B4F0W5 ), SLMA_SALA4 (B5EXE5 ), SLMA_SALAR (A9MKN4 ), SLMA_SALCH (Q57IA1 ), SLMA_SALDC (B5FM64 ), SLMA_SALEP (B5R5G5 ), SLMA_SALG2 (B5RGE6 ), SLMA_SALHS (B4T9C5 ), SLMA_SALNS (B4SXE2 ), SLMA_SALPA (Q5PC27 ), SLMA_SALPB (A9MVN6 ), SLMA_SALPC (C0Q1X3 ), SLMA_SALPK (B5BI15 ), SLMA_SALSV (B4TZY2 ), SLMA_SALTI (Q8Z2H4 ), SLMA_SALTY (Q8ZL46 ), SLMA_SERP5 (A8GLE8 ), SLMA_SHIB3 (B2TTV5 ), SLMA_SHIF8 (Q0SYG8 ), SLMA_SHIFL (P0C094 ), SLMA_SODGM (Q2NQT9 ), SLMA_YERE8 (A1JHW9 ), SLMA_YERP3 (A7FCT1 ), SLMA_YERPA (Q1C264 ), SLMA_YERPB (B2JYN0 ), SLMA_YERPE (Q8ZJP6 ), SLMA_YERPG (A9R671 ), SLMA_YERPN (Q1CCZ9 ), SLMA_YERPP (A4TSE0 ), SLMA_YERPS (Q66GD9 ), SLMA_YERPY (B1JQX6 ), SRPR_PSEPU (Q9R9T9 ), TCMR_STRGA (P39885 ), TETC_ECOLX (P28815 ), TETR1_ECOLX (P03038 ), TETR2_ECOLX (P04483 ), TETR3_ECOLX (P03039 ), TETR4_ECOLX (P0ACT4 ), TETR4_SALOR (P0ACT5 ), TETR5_ECOLX (P21337 ), TETR7_VIBAN (P51560 ), TETR8_PASMD (P51561 ), TETR8_PHODP (P51562 ), TETR_MYCA9 (B1MM06 ), TTGR_PSEPK (Q88N29 ), TTGR_PSEPT (Q9AIU0 ), TTGW_PSEPT (Q93PU7 ), UIDR_ECO57 (P0ACT8 ), UIDR_ECOL6 (P0ACT7 ), UIDR_ECOLI (P0ACT6 ), UIDR_SHIFL (P0ACT9 ), Y1388_MYCBO (P67435 ), Y1556_MYCTO (P9WMD0 ), Y1556_MYCTU (P9WMD1 ), Y1581_MYCBO (P67437 ), Y2250_MYCTO (P9WMC4 ), Y2250_MYCTU (P9WMC5 ), Y2274_MYCBO (Q7VEN0 ), Y2364_STAAN (Q7A3C7 ), Y2452_STAAB (Q2YWD0 ), Y2464_STAAS (Q6G696 ), Y2498_STAAW (Q79ZX9 ), Y2515_STAA3 (Q2FDS9 ), Y2578_STAAM (Q99R60 ), Y2593_STAAC (Q5HCX3 ), Y2658_STAAR (Q6GDM3 ), Y2897_STAA8 (Q2FV42 ), Y2912_MYCTO (P9WMC6 ), Y2912_MYCTU (P9WMC7 ), Y2936_MYCBO (P67441 ), Y570_HAEIN (P44757 ), Y767_MYCTO (P9WMD6 ), Y767_MYCTU (P9WMD7 ), Y790_MYCBO (P67433 ), Y893_HAEIN (P44923 ), YERO_BACSU (O31500 ), YHGD_BACSU (P32398 ), YTTP_BACSU (O34970 ), YUXN_BACSU (P40950 )» more
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UniProtKB/Swiss-Prot False negative sequences |
149 sequences
ACNR_CORDI (Q6NH62 ), ACNR_COREF (Q8FTA6 ), ACNR_CORGL (Q8NQ97 ), ACNR_CORJK (Q4JVM3 ), ACNR_MYCTU (O53165 ), ACUR_CERS4 (Q3J6K8 ), AFRP_STRGR (Q9ZN78 ), AQDR_RHOER (A0A0E4AFE3), BETI_RHIME (O69786 ), BETI_STRM5 (B4SHW1 ), COMR_ECOLI (P75952 ), DHAR_MYCSX (Q9RAJ1 ), DHAS_LACLA (Q9CIV9 ), ETHR_MYCBO (Q7TVI1 ), ETHR_MYCS2 (A0R666 ), ETHR_MYCTO (P9WMC0 ), ETHR_MYCTU (P9WMC1 ), FABR_CITK8 (A8AKV8 ), FABR_CROS8 (A7ML90 ), FABR_ECO24 (A7ZUI3 ), FABR_ECO57 (Q7A964 ), FABR_ECOBW (C5A0R2 ), FABR_ECODH (B1XBX4 ), FABR_ECOHS (A8A771 ), FABR_ECOK1 (A1AIE5 ), FABR_ECOL5 (Q0TA93 ), FABR_ECOL6 (Q8FB90 ), FABR_ECOLI (P0ACU5 ), FABR_ECOUT (Q1R3U4 ), FABR_KLEP7 (A6TGE7 ), FABR_SALAR (A9MHG9 ), FABR_SALCH (Q57H90 ), FABR_SALPA (Q5PK70 ), FABR_SALPC (C0Q479 ), FABR_SALPK (B5BJN7 ), FABR_SALTI (Q8XGD6 ), FABR_SALTY (Q7CPB8 ), FABR_SHIB3 (B2TWF8 ), FABR_SHIBS (Q31U25 ), FABR_SHIDS (Q32AE3 ), FABR_SHIF8 (Q0SY28 ), FABR_SHIFL (P0ACU6 ), FABR_SHISS (Q3YV13 ), FABR_YERE8 (A1JI38 ), FABR_YERP3 (A7FD11 ), FABR_YERPA (Q1CBU4 ), FABR_YERPB (B2JZF5 ), FABR_YERPE (Q7CL09 ), FABR_YERPG (A9R6N6 ), FABR_YERPN (Q1CNP3 ), FABR_YERPP (A4TRG3 ), FABR_YERPS (Q66G60 ), FABR_YERPY (B1JQ48 ), FADR_BACSU (P94548 ), HTHR_STRCO (Q9ADP7 ), ICAR_STAA8 (Q9RQQ0 ), ICAR_STAAC (Q5HCN2 ), ICAR_STAAE (A6QKF4 ), ICAR_STAAM (Q7A2K5 ), ICAR_STAAN (Q7A352 ), ICAR_STAAR (Q6GDD9 ), ICAR_STAAS (Q6G609 ), ICAR_STAAW (Q79ZV4 ), ICAR_STAEP (Q8GLC6 ), ICAR_STAEQ (Q5HKQ1 ), KSTR2_MYCS2 (A0R4Z6 ), KSTR2_MYCTO (P9WMB8 ), KSTR2_MYCTU (P9WMB9 ), KSTR2_RHOJR (Q0S7V2 ), KSTR_MYCS2 (A0R528 ), KSTR_MYCTU (P96856 ), KSTR_RHOJR (Q0S868 ), LFRR_MYCS2 (A0R5K4 ), LMRA_BACSU (O34619 ), LUXR_VIBHA (P21308 ), MCE3R_MYCTU (P95251 ), MFTR_MYCTO (P9WMB6 ), MFTR_MYCTU (P9WMB7 ), NEMR_ECOL6 (P67431 ), NEMR_ECOLI (P67430 ), NICS_PSEPK (Q88FX7 ), RAAS_MYCTU (O86312 ), RCDA_ECOLI (P75811 ), RUTR_ECO57 (Q8X4Z7 ), RUTR_ECOL6 (P0ACU3 ), RUTR_ECOLI (P0ACU2 ), RUTR_SHIFL (P0ACU4 ), SLMA_ALIF1 (Q5E8M7 ), SLMA_ALIFM (B5FFF4 ), SLMA_ALTMD (F2G1U7 ), SLMA_COLP3 (Q48AG4 ), SLMA_IDILO (Q5QZB7 ), SLMA_MARMS (A6VSX5 ), SLMA_MARN8 (A1U6F3 ), SLMA_PASMU (Q9CLQ9 ), SLMA_SHEAM (A1S2C9 ), SLMA_SHEB2 (B8E4J2 ), SLMA_SHEB5 (A3CZJ3 ), SLMA_SHEB8 (A6WIA3 ), SLMA_SHEB9 (A9KY01 ), SLMA_SHEDO (Q12SF8 ), SLMA_SHEFN (Q07WF8 ), SLMA_SHEHH (B0TQK8 ), SLMA_SHELP (A3QIQ2 ), SLMA_SHEON (Q8E9L9 ), SLMA_SHEPA (A8H9B3 ), SLMA_SHEPC (A4Y2K8 ), SLMA_SHEPW (B8CM26 ), SLMA_SHESA (A0L1S2 ), SLMA_SHESH (A8FQ72 ), SLMA_SHESM (Q0HE53 ), SLMA_SHESR (Q0HZU6 ), SLMA_SHESW (A1REU1 ), SLMA_SHEWM (B1KL08 ), SLMA_VIBA3 (B7VHK0 ), SLMA_VIBC1 (A7MSP5 ), SLMA_VIBCH (Q9KVD2 ), SLMA_VIBPA (Q87T90 ), SLMA_VIBVU (Q8DDX7 ), SLMA_VIBVY (Q7MPT0 ), Y097_STAAR (Q6GKL1 ), Y1255_MYCTO (P9WMD4 ), Y1255_MYCTU (P9WMD5 ), Y1816_MYCTO (P9WMC8 ), Y1816_MYCTU (P9WMC9 ), Y1846_MYCBO (P67439 ), Y196_MYCTO (P9WME0 ), Y196_MYCTU (P9WME1 ), Y472_MYCTO (P9WMD8 ), Y472_MYCTU (P9WMD9 ), Y6555_BACAN (Q9RMY4 ), Y681_MYCTU (O53789 ), YCNC_BACSU (P94423 ), YDES_BACSU (P96676 ), YDGC_BACSU (P96701 ), YDH1_XANAU (P22645 ), YEZE_BACSU (Q7WY76 ), YFIR_BACSU (O31560 ), YJDC_ECOL6 (P0ACU8 ), YJDC_ECOLI (P0ACU7 ), YJDC_SHIFL (P0ACU9 ), YOBS_BACSU (O34892 ), YPB3_LACLL (P42097 ), YVAF_BACSU (O32228 ), YVDT_BACSU (O07001 ), YVKB_BACSU (O34643 ), YWCC_BACSU (P39601 ), YXAF_BACSU (P42105 ), YXBF_BACSU (P46330 )» more |
PDB [Detailed view] |
107 PDB
1A6I; 1BJZ; 1JT0; 1JT6; 1JTX; 1JTY; 1JUM; 1JUP; 1JUS; 1ORK; 1QPI; 1QVT; 1QVU; 1RKW; 1RPW; 2DTZ; 2FJ1; 2G0E; 2GBY; 2HQ5; 2NS7; 2NS8; 2O7O; 2QOP; 2TCT; 2TRT; 2UXH; 2UXI; 2UXO; 2UXP; 2UXU; 2VKE; 2VKV; 2VPR; 2X6O; 2X9D; 2XB5; 2XDN; 2XGC; 2XGD; 2XGE; 2XPU; 2XPV; 2XPW; 2XRL; 3BCG; 3BQZ; 3BR0; 3BR1; 3BR2; 3BR3; 3BR5; 3BR6; 3BT9; 3BTC; 3BTI; 3BTJ; 3BTL; 3FK6; 3FK7; 3NXC; 3PM1; 3QKX; 3ZQF; 3ZQG; 3ZQH; 3ZQI; 4ABZ; 4AC0; 4AUX; 4B1R; 4B3A; 4D7M; 4D7N; 4GCK; 4GFL; 4V2F; 4V2G; 5FKK; 5FKL; 5FKM; 5FKN; 5FKO; 5HBU; 5HSZ; 5K58; 5MRU; 6FPL; 6FPM; 6FTS; 6MJ1; 6OF0; 6QJW; 6QJX; 6RBL; 6RBM; 6RCR; 6RGX; 6SY4; 6SY6; 6YR1; 6YR2; 7JNP; 7JU3; 7K1A; 7K1C; 7KD8 » more |