PROSITE entry PS01086
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General information about the entry
Entry name [info] | RIBUL_P_3_EPIMER_2 |
Accession [info] | PS01086 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00833 |
Name and characterization of the entry
Description [info] | Ribulose-phosphate 3-epimerase family signature 2. |
Pattern [info] |
[LIVMA]-x-[LIVM]-M-[ST]-[VS]-x-P-x(3)-[GN]-Q-x(0,1)-[FMK]-x(6)-[NKR]- [LIVMC]. |
Numerical results [info]
Total number of hits | 45 in 45 different sequences |
Number of true positive hits | 45 in 45 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 1 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 97.83 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
45 sequences
ALSE_ECOLI (P32719), RPE1_CUPNH (P40117), RPE1_ORYSJ (Q9SE42), RPE2_CUPNH (Q04539), RPE_AQUAE (O67098), RPE_ARATH (Q9SAU2), RPE_BACSU (O34557), RPE_BUCAI (P57603), RPE_BUCAP (Q8K940), RPE_BUCBP (Q89A59), RPE_CANGA (Q6FL81), RPE_CHLMU (Q9PKR7), RPE_CHLPN (Q9Z8Z9), RPE_CHLTR (O84123), RPE_ECO57 (P0AG09), RPE_ECOL6 (P0AG08), RPE_ECOLI (P0AG07), RPE_ENCCU (Q8SRP6), RPE_EREGS (Q755M2), RPE_HAEIN (P44756), RPE_HELPJ (Q9ZJ75), RPE_HELPY (P56188), RPE_HUMAN (Q96AT9), RPE_METJA (Q58093), RPE_MOUSE (Q8VEE0), RPE_MYCBO (P65761), RPE_MYCGE (P47358), RPE_MYCLE (Q9CCP9), RPE_MYCPN (P75522), RPE_MYCTO (P9WI50), RPE_MYCTU (P9WI51), RPE_ORYSJ (Q9ZTP5), RPE_PONAB (Q5R5Y2), RPE_RHOCA (P51012), RPE_RHORU (P51013), RPE_SCHPO (O14105), RPE_SERMA (P45455), RPE_SHIFL (P0AG10), RPE_SOLTU (Q43843), RPE_SPIOL (Q43157), RPE_STRCO (Q9L0Z5), RPE_SYNY3 (P74061), RPE_TREPA (O66107), RPE_YEAST (P46969), SGCE_ECOLI (P39362)» more
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UniProtKB/Swiss-Prot False negative sequences |
1 sequence
RPEL1_HUMAN (Q2QD12) |
PDB [Detailed view] |
10 PDB
1H1Y; 1H1Z; 1RPX; 1TQJ; 3CT7; 3CTL; 3OVP; 3OVQ; 3OVR; 3QC3 |