Entry: PS01095

General information about the entry

Entry name [info] CHITINASE_18
Accession [info] PS01095
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED; 01-NOV-1995 DATA UPDATE; 12-SEP-2018 INFO UPDATE.
PROSITE Doc. [info] PDOC00839
Associated ProRule [info] PRU10053

Name and characterization of the entry

Description [info] Chitinases family 18 active site.
Pattern [info] 
[LIVMFY]-[DN]-G-[LIVMF]-[DN]-[LIVMF]-[DN]-x-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2018_08 which contains 558'125 sequence entries.


Total number of hits 99 in 98 different sequences
Number of true positive hits 88 in 87 different sequences
Number of 'unknown' hits 0
Number of false positive hits 11 in 11 different sequences
Number of false negative sequences 41
Number of 'partial' sequences 6
Precision (true positives / (true positives + false positives)) 88.89 %
Recall (true positives / (true positives + false negatives)) 68.22 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 2
Site [info] active_site at position 9
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 87 sequences 

CHI10_DROME (Q9W5U2    ), CHI1_APHAL  (P32470    ), CHI1_ARTBC  (D4AT07    ), 

CHI1_CANAL  (Q5AAH2    ), CHI1_CANAX  (P46876    ), CHI1_COCIM  (Q1E3R8    ), 
CHI1_COCP7  (C5P230    ), CHI1_COCPS  (P0CB51    ), CHI1_METAN  (O14456    ), 
CHI1_METRA  (E9ERT9    ), CHI1_PINMG  (H2A0L4    ), CHI1_RHINI  (P29025    ), 
CHI1_RHIOL  (P29026    ), CHI2_ARTBC  (D4AVJ0    ), CHI2_CANAL  (P40953    ), 
CHI2_COCIM  (Q1EAR5    ), CHI2_COCP7  (P54197    ), CHI2_METAN  (Q4U4T0    ), 
CHI2_METRA  (E9F9R9    ), CHI2_PINMG  (H2A0L5    ), CHI2_RHIOL  (P29027    ), 
CHI2_YEAST  (Q06350    ), CHI33_ARTBC (D4B4X4    ), CHI33_TRIHA (Q12713    ), 
CHI37_TRIHA (Q8NJQ5    ), CHI3_CANAL  (P40954    ), CHI3_METAN  (Q6QDR4    ), 
CHI3_METRA  (E9ENC6    ), CHI42_TRIHA (P48827    ), CHI46_TRIHA (A6N6J0    ), 
CHI4_CANAL  (Q5AM60    ), CHI4_METAN  (C9WJD0    ), CHI4_METRA  (E9F7R6    ), 
CHIA1_ASPFM (Q873Y0    ), CHIA1_ASPFU (Q4WEP7    ), CHIA1_ASPNC (A2QUQ2    ), 
CHIA1_BACCI (P20533    ), CHIA1_EMEND (Q92223    ), CHIA1_EMENI (G5EB30    ), 
CHIA_ARATH  (P19172    ), CHIA_BOVIN  (Q95M17    ), CHIA_CICAR  (P36908    ), 
CHIA_CUCSA  (P17541    ), CHIA_FLAJ1  (A5FB63    ), CHIA_HUMAN  (Q9BZP6    ), 
CHIA_MOUSE  (Q91XA9    ), CHIA_PHAAN  (P29024    ), CHIA_PSEO7  (P32823    ), 
CHIA_RAT    (Q6RY07    ), CHIA_SERMA  (P07254    ), CHIA_TOBAC  (P29060    ), 
CHIB1_ASPFM (Q873X9    ), CHIB1_ASPFU (E9QRF2    ), CHIB1_EMENI (G5EAZ3    ), 
CHIB_EMEND  (Q92222    ), CHIB_SERMA  (P11797    ), CHIB_TOBAC  (P29061    ), 
CHID_BACCI  (P27050    ), CHIE_BETVU  (P36910    ), CHIT1_HUMAN (Q13231    ), 
CHIT1_MOUSE (Q9D7Q1    ), CHIT1_TULSB (Q9SLP4    ), CHIT2_DROME (Q9W092    ), 
CHIT2_TULSB (Q7M443    ), CHIT3_VITVI (P51614    ), CHIT_BRUMA  (P29030    ), 
CHIT_CAEEL  (Q11174    ), CHIT_MANSE  (P36362    ), CHIT_NPVAC  (P41684    ), 
CHIT_NPVOP  (O10363    ), CHIT_STRLI  (P36909    ), CHIT_STRPL  (P11220    ), 
CHIT_YEAST  (P29029    ), CHIX_STROI  (Q05638    ), CHI_PINMA   (P86955    ), 
CHLY_HEVBR  (P23472    ), DIAC_BOVIN  (Q01458    ), DIAC_HUMAN  (Q01459    ), 
DIAC_MOUSE  (Q8R242    ), DIAC_RAT    (Q01460    ), EBA2_ELIME  (P36912    ), 
EBAG_FLAST  (P80036    ), EBAG_STRPL  (P04067    ), EBI1_BIFLS  (B7GPC7    ), 
KTXA_KLULA  (P09805    ), PPG1_CANAL  (Q5A6B6    ), YKVQ_BACSU  (O31682    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 41 sequences 

CH3L1_BOVIN (P30922    ), CH3L1_BUBBU (Q7YS85    ), CH3L1_CAPHI (Q8SPQ0    ), 

CH3L1_HUMAN (P36222    ), CH3L1_MOUSE (Q61362    ), CH3L1_PIG   (Q29411    ), 
CH3L1_PONAB (Q5RBP6    ), CH3L1_RAT   (Q9WTV1    ), CH3L1_SHEEP (Q6TMG6    ), 
CH3L2_HUMAN (Q15782    ), CHIA_ECOLI  (P13656    ), CHID1_BOVIN (Q5EAB4    ), 
CHID1_DANRE (Q7SYK0    ), CHID1_DICDI (Q54G42    ), CHID1_HUMAN (Q9BWS9    ), 
CHID1_MOUSE (Q922Q9    ), CHID1_PONAB (Q5RFF6    ), CHID1_RAT   (A0JPQ9    ), 
CHID1_XENLA (Q68EX9    ), CHID1_XENTR (Q66IL0    ), CHID_VIBFU  (P96156    ), 
CHITL_CAEEL (Q18143    ), CHIT_SACEN  (P14529    ), CONB_CANEN  (P49347    ), 
DIAC1_DICDI (Q7KWW8    ), DIAC2_DICDI (Q8T293    ), EBA1_ELIME  (P36911    ), 
EBA3_ELIME  (P36913    ), OVGP1_BOVIN (Q28042    ), OVGP1_HUMAN (Q12889    ), 
OVGP1_MESAU (Q60557    ), OVGP1_MOUSE (Q62010    ), OVGP1_PAPAN (P36718    ), 
OVGP1_PIG   (Q28990    ), OVGP1_SHEEP (Q28542    ), XIP1_ORYSJ  (Q7GCM7    ), 
XIP1_WHEAT  (Q8L5C6    ), XIP2_ORYSJ  (Q53NL5    ), YDHD_BACSU  (O05495    ), 
YKZR_BACSU  (C0H404    ), YVBX_BACSU  (O32258    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 6 sequences 

CAI_PHAVU   (P84708    ), CHI1_STROI  (P29115    ), CHI2_STROI  (P29116    ), 

CHIT_STRVL  (P84754    ), CHLY_PARTH  (P23473    ), NAHA1_PALCA (P85512    )
» more

UniProtKB/Swiss-Prot
False positive sequences		 11 sequences 

CAPSD_CPVBM (Q6TS43    ), CAPSD_LDCPR (Q91IE1    ), CCNL2_XENTR (Q5BKF8    ), 

HISX_CALS4  (Q8R882    ), NU4C_PROM0  (A3PAL7    ), NU4C_PROM2  (A8G2F5    ), 
NU4C_PROM5  (A2BUC6    ), NU4C_PROM9  (Q31D31    ), NU4C_PROMP  (Q7V3C8    ), 
SSUB2_RHIL3 (Q1M7A6    ), TRPM2_HUMAN (O94759    )
» more

PDB
[Detailed view]		 85 PDB

1C3F; 1CTN; 1D2K; 1EDT; 1FFQ; 1FFR; 1GOI; 1GUV; 1H0G; 1H0I; 1HKI; 1HKJ; 1HKK; 1HKM; 1HVQ; 1ITX; 1K9T; 1LG1; 1LG2; 1LL4; 1LL6; 1LLO; 1LQ0; 1O6I; 1OGB; 1OGG; 1RD6; 1W9P; 1W9U; 1W9V; 1WAW; 1WB0; 1WNO; 1X6L; 1X6N; 2A3A; 2A3B; 2A3C; 2A3E; 2HVM; 2IUZ; 2UY2; 2UY3; 2UY4; 2UY5; 2WK2; 2WLY; 2WLZ; 2WM0; 2XUC; 2XVN; 2YBT; 2YBU; 3CH9; 3CHC; 3CHD; 3CHE; 3CHF; 3FXY; 3FY1; 3RM4; 3RM8; 3RM9; 3RME; 3WD0; 3WD1; 3WD2; 3WD3; 3WD4; 4TXE; 4WJX; 4WK9; 4WKA; 4WKF; 4WKH; 4Z2G; 4Z2H; 4Z2I; 4Z2J; 4Z2K; 4Z2L; 5HBF; 5NR8; 5NRA; 5NRF
» more

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