PROSITE entry PS01096
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General information about the entry
Entry name [info] | PPIC_PPIASE_1 |
Accession [info] | PS01096 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1995 CREATED;
01-DEC-2001 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00840 |
Name and characterization of the entry
Description [info] | PpiC-type peptidyl-prolyl cis-trans isomerase signature. |
Pattern [info] |
F-[GSADEI]-x-[LVAQ]-A-x(3)-[ST]-x(3,4)-[STQ]-x(3,5)-[GER]-G-x-[LIVM]- [GS]. |
Numerical results [info]
Total number of hits | 120 in 101 different sequences |
Number of true positive hits | 119 in 100 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 1 |
Number of false negative sequences | 131 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 99.17 % |
Recall (true positives / (true positives + false negatives)) | 47.60 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 2 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
100 sequences
CBF2_CAMJE (Q0PAS1 ), CBF2_CAMJJ (A1VYV6 ), DOD_DROME (P54353 ), ESS1_YEAST (P22696 ), NIFM_AZOCH (P23119 ), NIFM_AZOVI (P14890 ), NIFM_KLEOX (P0A3Z0 ), NIFM_KLEPN (P0A3Y9 ), PIN1_ARATH (Q9SL42 ), PIN1_BOVIN (Q5BIN5 ), PIN1_DIGLA (Q9LEK8 ), PIN1_HUMAN (Q13526 ), PIN1_MACFA (Q4R383 ), PIN1_MALDO (Q94G00 ), PIN1_MOUSE (Q9QUR7 ), PLP1_BORBR (Q7WCX5 ), PLP1_BORPA (Q7W5E0 ), PLP1_BORPE (P40415 ), PLP_RICBR (Q1RI35 ), PPIC_ECO57 (P0A9L7 ), PPIC_ECOL6 (P0A9L6 ), PPIC_ECOLI (P0A9L5 ), PPIC_SALTI (P0A266 ), PPIC_SALTY (P0A265 ), PPID_ECOL6 (P0ADY2 ), PPID_ECOLI (P0ADY1 ), PPID_HAEDU (Q7VKX4 ), PPID_HAEIN (P44092 ), PRSA1_BACAN (Q81U45 ), PRSA1_BACCR (Q81GY5 ), PRSA2_BACAN (Q81TU1 ), PRSA2_BACCR (Q81GN0 ), PRSA3_BACCR (Q81DT1 ), PRSA4_BACCR (Q81CB1 ), PRSA_BACSU (P24327 ), PRSA_CALS4 (Q8R760 ), PRSA_CLOAB (Q97E99 ), PRSA_CLOB1 (A7FPK5 ), PRSA_CLOB6 (C3KW94 ), PRSA_CLOBH (A5I7R3 ), PRSA_CLOBJ (C1FNE4 ), PRSA_CLOBK (B1IGZ5 ), PRSA_CLOBL (A7GJD2 ), PRSA_CLOBM (B1KTE0 ), PRSA_CLOK1 (B9DY54 ), PRSA_CLOK5 (A5N4J2 ), PRSA_GEOKA (Q5L289 ), PRSA_GEOSW (C5D6L9 ), PRSA_GEOTN (A4IKU2 ), PRSA_LACLC (P0C2B5 ), PRSA_LACLS (Q02VE3 ), PRSA_LACPA (Q02473 ), PRSA_OCEIH (Q8CXK4 ), SURA_ALBFT (Q223E5 ), SURA_ALKEH (Q0AC82 ), SURA_AROAE (Q5P7I9 ), SURA_BAUCH (Q1LSS0 ), SURA_CHRSD (Q1QZ33 ), SURA_COLP3 (Q47VK0 ), SURA_CUPMC (Q1LRA3 ), SURA_CUPPJ (Q475Q3 ), SURA_DECAR (Q479U4 ), SURA_ECO57 (P0ABZ8 ), SURA_ECOL6 (P0ABZ7 ), SURA_ECOLI (P0ABZ6 ), SURA_ECOUT (Q1RGE4 ), SURA_HAEIN (P44721 ), SURA_IDILO (Q5QVN9 ), SURA_METCA (Q60B78 ), SURA_METFK (Q1GZC0 ), SURA_NITMU (Q2YBP3 ), SURA_NITOC (Q3JAF1 ), SURA_PECAS (Q6D0E2 ), SURA_PHOLL (Q7N8V5 ), SURA_POLSJ (Q121Q4 ), SURA_PSEA6 (Q15QB3 ), SURA_RALSO (Q8Y220 ), SURA_SACD2 (Q21MS8 ), SURA_SALCH (Q57TG8 ), SURA_SALPA (Q5PDE6 ), SURA_SALTI (Q8XEV3 ), SURA_SALTY (Q7CR87 ), SURA_SHEDO (Q12K61 ), SURA_SHEFN (Q07YK0 ), SURA_SHEON (Q8EB95 ), SURA_SHESM (Q0HLT0 ), SURA_SHESR (Q0HS08 ), SURA_SHIBS (Q326I0 ), SURA_SHIDS (Q32K41 ), SURA_SHIFL (P0ABZ9 ), SURA_SHISS (Q3Z5V6 ), SURA_SODGM (Q2NVX4 ), SURA_THIDA (Q3SGF9 ), SURA_YERPA (Q1C0H3 ), SURA_YERPE (Q7CG87 ), SURA_YERPN (Q1CMT0 ), SURA_YERPS (Q66EQ7 ), Y161_HELPJ (Q9ZMQ7 ), Y175_HELPY (P56112 ), YACD_BACSU (P37566 )» more
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UniProtKB/Swiss-Prot False negative sequences |
131 sequences
PIN1_RHIO9 (P0C1J8 ), PIN1_SCHPO (O74448 ), PIN4_ASPFU (Q4WJM6 ), PIN4_BOVIN (A6QPY8 ), PIN4_DANRE (Q503Y7 ), PIN4_EMENI (Q5B5W1 ), PIN4_GIBZE (Q4I665 ), PIN4_HUMAN (Q9Y237 ), PIN4_MOUSE (Q9CWW6 ), PIN4_NEUCR (Q7RYY4 ), PIN4_TAEGU (B5KFL3 ), PIN4_XENTR (Q6P4K8 ), PLP_RICCN (Q92H91 ), PLP_RICFE (Q4UKY0 ), PLP_RICPR (Q9ZCX6 ), PLP_RICTY (Q68WG0 ), PPID_BUCAI (P57550 ), PPID_BUCAP (Q8K987 ), PPID_BUCBP (Q89A98 ), PRSA1_LACJO (P60750 ), PRSA1_LACPL (Q88X05 ), PRSA1_LISIN (Q92BR2 ), PRSA1_LISMF (Q71ZM6 ), PRSA1_LISMO (Q8Y759 ), PRSA1_STRP1 (P60811 ), PRSA1_STRP3 (P0DD42 ), PRSA1_STRP6 (Q5XBH0 ), PRSA1_STRP8 (Q8P0E5 ), PRSA1_STRPQ (P0DD43 ), PRSA2_LACJO (P60810 ), PRSA2_LACPL (Q88T16 ), PRSA2_LISIN (Q929F4 ), PRSA2_LISMF (Q71XE6 ), PRSA2_LISMO (Q8Y557 ), PRSA2_STRP1 (P60812 ), PRSA2_STRP3 (P0DD44 ), PRSA2_STRP6 (Q5X9P6 ), PRSA2_STRP8 (P60813 ), PRSA2_STRPQ (P0DD45 ), PRSA3_BACAN (Q81QT1 ), PRSA_CLOP1 (Q0TMG9 ), PRSA_CLOPE (Q8XHK0 ), PRSA_CLOPS (Q0SQ68 ), PRSA_CLOTE (Q899I2 ), PRSA_ENTFA (Q837Y9 ), PRSA_EXIS2 (B1YK87 ), PRSA_HALH5 (Q9KDN4 ), PRSA_LATSS (Q38XZ9 ), PRSA_LEVBA (Q03QE1 ), PRSA_LIGS1 (Q1WUQ1 ), PRSA_PEDPA (Q03GD4 ), PRSA_STAA1 (A7X3U8 ), PRSA_STAA2 (A6U2U4 ), PRSA_STAA3 (Q2FFQ5 ), PRSA_STAA8 (Q2G2S6 ), PRSA_STAAB (Q2YTZ6 ), PRSA_STAAC (Q5HET4 ), PRSA_STAAE (A6QI23 ), PRSA_STAAM (P60747 ), PRSA_STAAN (P60748 ), PRSA_STAAR (Q6GFL5 ), PRSA_STAAS (Q6G894 ), PRSA_STAAT (A8YY10 ), PRSA_STAAW (P60749 ), PRSA_STAEQ (Q5HN96 ), PRSA_STAES (Q8CNR4 ), PRSA_STRA1 (Q3K1P9 ), PRSA_STRA3 (Q8E602 ), PRSA_STRA5 (Q8E0C6 ), PRSA_STRE4 (C0M9L5 ), PRSA_STREM (B4U214 ), PRSA_STRGC (A8AYJ0 ), PRSA_STRMU (Q8CVC6 ), PRSA_STRP2 (Q04KU8 ), PRSA_STRP7 (C1C6V8 ), PRSA_STRPI (B1IBE1 ), PRSA_STRPJ (B8ZPD9 ), PRSA_STRPN (Q97R51 ), PRSA_STRPS (B2IPD4 ), PRSA_STRR6 (Q8DQ24 ), PRSA_STRS7 (C0MCT3 ), PRSA_STRSV (A3CLY1 ), PRSA_STRZJ (C1CDX6 ), PRSA_STRZP (C1CK62 ), PRSA_STRZT (C1CRR9 ), SSP1_NEUCR (O60045 ), STR12_ARATH (Q93WI0 ), SURA_ALCBS (Q0VMV4 ), SURA_ALIF1 (Q5E863 ), SURA_BLOPB (Q493R5 ), SURA_BORA1 (Q2KXA6 ), SURA_BORBR (Q7WG19 ), SURA_BORPA (Q7W4J5 ), SURA_BORPE (Q7VU12 ), SURA_BUCAI (P57240 ), SURA_BUCAP (Q8KA01 ), SURA_BURL3 (Q39D35 ), SURA_BURMA (Q62MM4 ), SURA_BURO1 (Q1BTQ6 ), SURA_BURP1 (Q3JVW8 ), SURA_BURPS (Q63X78 ), SURA_BURTA (Q2T116 ), SURA_CHRVO (Q7NQB0 ), SURA_HAHCH (Q2S9C1 ), SURA_HYDCU (Q31F26 ), SURA_LEGPA (Q5X877 ), SURA_LEGPH (Q5ZYR3 ), SURA_LEGPL (Q5WZN0 ), SURA_NITEU (Q82W17 ), SURA_PARXL (Q145L3 ), SURA_PHOPR (Q6LV39 ), SURA_PSE14 (Q48NT5 ), SURA_PSEAE (Q9I5U3 ), SURA_PSEF5 (Q4K4X7 ), SURA_PSEPF (Q3K5T4 ), SURA_PSEPK (Q88QT4 ), SURA_PSESM (Q88A44 ), SURA_PSET1 (Q3IFD3 ), SURA_PSEU2 (Q4ZMG7 ), SURA_VIBCH (Q9KUS0 ), SURA_VIBPA (Q87ST4 ), SURA_VIBVU (Q8DED4 ), SURA_VIBVY (Q7MP84 ), SURA_XANAC (Q8PP23 ), SURA_XANC5 (Q3BX80 ), SURA_XANC8 (Q4UR41 ), SURA_XANCP (Q8PCE1 ), SURA_XANOM (Q2NZI6 ), SURA_XANOR (Q5GWC1 ), SURA_XYLFA (Q9PF40 ), SURA_XYLFT (Q87AJ0 )» more |
UniProtKB/Swiss-Prot False positive sequences |
1 sequence
PGK_APLCA (O61471 ) |
PDB [Detailed view] |
84 PDB
1F8A; 1J6Y; 1JNS; 1JNT; 1M5Y; 1NMV; 1NMW; 1PIN; 1ZCN; 1ZK6; 2F21; 2ITK; 2KGJ; 2PV1; 2PV2; 2PV3; 2Q5A; 2RUC; 2RUD; 2RUQ; 2RUR; 2XP3; 2XP4; 2XP5; 2XP6; 2XP7; 2XP8; 2XP9; 2XPA; 2XPB; 2ZQS; 2ZQT; 2ZQU; 2ZQV; 2ZR4; 2ZR5; 2ZR6; 3I6C; 3IK8; 3IKD; 3IKG; 3JYJ; 3KAB; 3KAC; 3KAD; 3KAF; 3KAG; 3KAH; 3KAI; 3KCE; 3NTP; 3ODK; 3OOB; 3RFW; 3TC5; 3TCZ; 3TDB; 3WH0; 4QIB; 4TNS; 4TYO; 4U84; 4U85; 4U86; 4WO7; 5EZ1; 5GPH; 5UY9; 6BHF; 6DUN; 6O33; 6O34; 6VAJ; 6VJ4; 6VJ6; 6XD8; 7EFJ; 7EFX; 7EKV; 7F0M; 7KKF; 7SA5; 7SUQ; 7SUR » more |