PROSITE entry PS01096
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry
Entry name [info] | PPIC_PPIASE_1 |
Accession [info] | PS01096 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1995 CREATED;
01-DEC-2001 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00840 |
Name and characterization of the entry
Description [info] | PpiC-type peptidyl-prolyl cis-trans isomerase signature. |
Pattern [info] |
F-[GSADEI]-x-[LVAQ]-A-x(3)-[ST]-x(3,4)-[STQ]-x(3,5)-[GER]-G-x-[LIVM]- [GS]. |
Numerical results [info]
Total number of hits | 120 in 101 different sequences |
Number of true positive hits | 119 in 100 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 1 |
Number of false negative sequences | 131 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 99.17 % |
Recall (true positives / (true positives + false negatives)) | 47.60 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 2 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
100 sequences
CBF2_CAMJE (Q0PAS1), CBF2_CAMJJ (A1VYV6), DOD_DROME (P54353), ESS1_YEAST (P22696), NIFM_AZOCH (P23119), NIFM_AZOVI (P14890), NIFM_KLEOX (P0A3Z0), NIFM_KLEPN (P0A3Y9), PIN1_ARATH (Q9SL42), PIN1_BOVIN (Q5BIN5), PIN1_DIGLA (Q9LEK8), PIN1_HUMAN (Q13526), PIN1_MACFA (Q4R383), PIN1_MALDO (Q94G00), PIN1_MOUSE (Q9QUR7), PLP1_BORBR (Q7WCX5), PLP1_BORPA (Q7W5E0), PLP1_BORPE (P40415), PLP_RICBR (Q1RI35), PPIC_ECO57 (P0A9L7), PPIC_ECOL6 (P0A9L6), PPIC_ECOLI (P0A9L5), PPIC_SALTI (P0A266), PPIC_SALTY (P0A265), PPID_ECOL6 (P0ADY2), PPID_ECOLI (P0ADY1), PPID_HAEDU (Q7VKX4), PPID_HAEIN (P44092), PRSA1_BACAN (Q81U45), PRSA1_BACCR (Q81GY5), PRSA2_BACAN (Q81TU1), PRSA2_BACCR (Q81GN0), PRSA3_BACCR (Q81DT1), PRSA4_BACCR (Q81CB1), PRSA_BACSU (P24327), PRSA_CALS4 (Q8R760), PRSA_CLOAB (Q97E99), PRSA_CLOB1 (A7FPK5), PRSA_CLOB6 (C3KW94), PRSA_CLOBH (A5I7R3), PRSA_CLOBJ (C1FNE4), PRSA_CLOBK (B1IGZ5), PRSA_CLOBL (A7GJD2), PRSA_CLOBM (B1KTE0), PRSA_CLOK1 (B9DY54), PRSA_CLOK5 (A5N4J2), PRSA_GEOKA (Q5L289), PRSA_GEOSW (C5D6L9), PRSA_GEOTN (A4IKU2), PRSA_LACLC (P0C2B5), PRSA_LACLS (Q02VE3), PRSA_LACPA (Q02473), PRSA_OCEIH (Q8CXK4), SURA_ALBFT (Q223E5), SURA_ALKEH (Q0AC82), SURA_AROAE (Q5P7I9), SURA_BAUCH (Q1LSS0), SURA_CHRSD (Q1QZ33), SURA_COLP3 (Q47VK0), SURA_CUPMC (Q1LRA3), SURA_CUPPJ (Q475Q3), SURA_DECAR (Q479U4), SURA_ECO57 (P0ABZ8), SURA_ECOL6 (P0ABZ7), SURA_ECOLI (P0ABZ6), SURA_ECOUT (Q1RGE4), SURA_HAEIN (P44721), SURA_IDILO (Q5QVN9), SURA_METCA (Q60B78), SURA_METFK (Q1GZC0), SURA_NITMU (Q2YBP3), SURA_NITOC (Q3JAF1), SURA_PECAS (Q6D0E2), SURA_PHOLL (Q7N8V5), SURA_POLSJ (Q121Q4), SURA_PSEA6 (Q15QB3), SURA_RALN1 (Q8Y220), SURA_SACD2 (Q21MS8), SURA_SALCH (Q57TG8), SURA_SALPA (Q5PDE6), SURA_SALTI (Q8XEV3), SURA_SALTY (Q7CR87), SURA_SHEDO (Q12K61), SURA_SHEFN (Q07YK0), SURA_SHEON (Q8EB95), SURA_SHESM (Q0HLT0), SURA_SHESR (Q0HS08), SURA_SHIBS (Q326I0), SURA_SHIDS (Q32K41), SURA_SHIFL (P0ABZ9), SURA_SHISS (Q3Z5V6), SURA_SODGM (Q2NVX4), SURA_THIDA (Q3SGF9), SURA_YERPA (Q1C0H3), SURA_YERPE (Q7CG87), SURA_YERPN (Q1CMT0), SURA_YERPS (Q66EQ7), Y161_HELPJ (Q9ZMQ7), Y175_HELPY (P56112), YACD_BACSU (P37566)» more
|
UniProtKB/Swiss-Prot False negative sequences |
131 sequences
PIN1_RHIO9 (P0C1J8), PIN1_SCHPO (O74448), PIN4_ASPFU (Q4WJM6), PIN4_BOVIN (A6QPY8), PIN4_DANRE (Q503Y7), PIN4_EMENI (Q5B5W1), PIN4_GIBZE (Q4I665), PIN4_HUMAN (Q9Y237), PIN4_MOUSE (Q9CWW6), PIN4_NEUCR (Q7RYY4), PIN4_TAEGU (B5KFL3), PIN4_XENTR (Q6P4K8), PLP_RICCN (Q92H91), PLP_RICFE (Q4UKY0), PLP_RICPR (Q9ZCX6), PLP_RICTY (Q68WG0), PPID_BUCAI (P57550), PPID_BUCAP (Q8K987), PPID_BUCBP (Q89A98), PRSA1_LACJO (P60750), PRSA1_LACPL (Q88X05), PRSA1_LISIN (Q92BR2), PRSA1_LISMF (Q71ZM6), PRSA1_LISMO (Q8Y759), PRSA1_STRP1 (P60811), PRSA1_STRP3 (P0DD42), PRSA1_STRP6 (Q5XBH0), PRSA1_STRP8 (Q8P0E5), PRSA1_STRPQ (P0DD43), PRSA2_LACJO (P60810), PRSA2_LACPL (Q88T16), PRSA2_LISIN (Q929F4), PRSA2_LISMF (Q71XE6), PRSA2_LISMO (Q8Y557), PRSA2_STRP1 (P60812), PRSA2_STRP3 (P0DD44), PRSA2_STRP6 (Q5X9P6), PRSA2_STRP8 (P60813), PRSA2_STRPQ (P0DD45), PRSA3_BACAN (Q81QT1), PRSA_CLOP1 (Q0TMG9), PRSA_CLOPE (Q8XHK0), PRSA_CLOPS (Q0SQ68), PRSA_CLOTE (Q899I2), PRSA_ENTFA (Q837Y9), PRSA_EXIS2 (B1YK87), PRSA_HALH5 (Q9KDN4), PRSA_LATSS (Q38XZ9), PRSA_LEVBA (Q03QE1), PRSA_LIGS1 (Q1WUQ1), PRSA_PEDPA (Q03GD4), PRSA_STAA1 (A7X3U8), PRSA_STAA2 (A6U2U4), PRSA_STAA3 (Q2FFQ5), PRSA_STAA8 (Q2G2S6), PRSA_STAAB (Q2YTZ6), PRSA_STAAC (Q5HET4), PRSA_STAAE (A6QI23), PRSA_STAAM (P60747), PRSA_STAAN (P60748), PRSA_STAAR (Q6GFL5), PRSA_STAAS (Q6G894), PRSA_STAAT (A8YY10), PRSA_STAAW (P60749), PRSA_STAEQ (Q5HN96), PRSA_STAES (Q8CNR4), PRSA_STRA1 (Q3K1P9), PRSA_STRA3 (Q8E602), PRSA_STRA5 (Q8E0C6), PRSA_STRE4 (C0M9L5), PRSA_STREM (B4U214), PRSA_STRGC (A8AYJ0), PRSA_STRMU (Q8CVC6), PRSA_STRP2 (Q04KU8), PRSA_STRP7 (C1C6V8), PRSA_STRPI (B1IBE1), PRSA_STRPJ (B8ZPD9), PRSA_STRPN (Q97R51), PRSA_STRPS (B2IPD4), PRSA_STRR6 (Q8DQ24), PRSA_STRS7 (C0MCT3), PRSA_STRSV (A3CLY1), PRSA_STRZJ (C1CDX6), PRSA_STRZP (C1CK62), PRSA_STRZT (C1CRR9), SSP1_NEUCR (O60045), STR12_ARATH (Q93WI0), SURA_ALCBS (Q0VMV4), SURA_ALIF1 (Q5E863), SURA_BLOPB (Q493R5), SURA_BORA1 (Q2KXA6), SURA_BORBR (Q7WG19), SURA_BORPA (Q7W4J5), SURA_BORPE (Q7VU12), SURA_BUCAI (P57240), SURA_BUCAP (Q8KA01), SURA_BURL3 (Q39D35), SURA_BURMA (Q62MM4), SURA_BURO1 (Q1BTQ6), SURA_BURP1 (Q3JVW8), SURA_BURPS (Q63X78), SURA_BURTA (Q2T116), SURA_CHRVO (Q7NQB0), SURA_HAHCH (Q2S9C1), SURA_HYDCU (Q31F26), SURA_LEGPA (Q5X877), SURA_LEGPH (Q5ZYR3), SURA_LEGPL (Q5WZN0), SURA_NITEU (Q82W17), SURA_PARXL (Q145L3), SURA_PHOPR (Q6LV39), SURA_PSE14 (Q48NT5), SURA_PSEAE (Q9I5U3), SURA_PSEF5 (Q4K4X7), SURA_PSEPF (Q3K5T4), SURA_PSEPK (Q88QT4), SURA_PSESM (Q88A44), SURA_PSET1 (Q3IFD3), SURA_PSEU2 (Q4ZMG7), SURA_VIBCH (Q9KUS0), SURA_VIBPA (Q87ST4), SURA_VIBVU (Q8DED4), SURA_VIBVY (Q7MP84), SURA_XANAC (Q8PP23), SURA_XANC5 (Q3BX80), SURA_XANC8 (Q4UR41), SURA_XANCP (Q8PCE1), SURA_XANOM (Q2NZI6), SURA_XANOR (Q5GWC1), SURA_XYLFA (Q9PF40), SURA_XYLFT (Q87AJ0)» more |
UniProtKB/Swiss-Prot False positive sequences |
1 sequence
PGK_APLCA (O61471) |
PDB [Detailed view] |
84 PDB
1F8A; 1J6Y; 1JNS; 1JNT; 1M5Y; 1NMV; 1NMW; 1PIN; 1ZCN; 1ZK6; 2F21; 2ITK; 2KGJ; 2PV1; 2PV2; 2PV3; 2Q5A; 2RUC; 2RUD; 2RUQ; 2RUR; 2XP3; 2XP4; 2XP5; 2XP6; 2XP7; 2XP8; 2XP9; 2XPA; 2XPB; 2ZQS; 2ZQT; 2ZQU; 2ZQV; 2ZR4; 2ZR5; 2ZR6; 3I6C; 3IK8; 3IKD; 3IKG; 3JYJ; 3KAB; 3KAC; 3KAD; 3KAF; 3KAG; 3KAH; 3KAI; 3KCE; 3NTP; 3ODK; 3OOB; 3RFW; 3TC5; 3TCZ; 3TDB; 3WH0; 4QIB; 4TNS; 4TYO; 4U84; 4U85; 4U86; 4WO7; 5EZ1; 5GPH; 5UY9; 6BHF; 6DUN; 6O33; 6O34; 6VAJ; 6VJ4; 6VJ6; 6XD8; 7EFJ; 7EFX; 7EKV; 7F0M; 7KKF; 7SA5; 7SUQ; 7SUR » more |