PROSITE entry PS01098
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General information about the entry
| Entry name [info] | LIPASE_GDSL_SER |
| Accession [info] | PS01098 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1995 CREATED;
01-NOV-1995 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00842 |
Name and characterization of the entry
| Description [info] | Lipolytic enzymes "G-D-S-L" family, serine active site. |
| Pattern [info] |
[LIVMFYAG](4)-G-D-S-[LIVM]-x(1,2)-[TAG]-G. |
Numerical results [info]
| Total number of hits | 54 in 48 different sequences |
| Number of true positive hits | 49 in 43 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 5 in 5 different sequences |
| Number of false negative sequences | 124 |
| Number of 'partial' sequences | 3 |
| Precision (true positives / (true positives + false positives)) | 90.74 % |
| Recall (true positives / (true positives + false negatives)) | 28.32 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 2 |
| Site [info] | active_site at position 4 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
43 sequences
APG_ARATH (P40602), APG_BRANA (P40603), ESTA_PSEAE (O33407), ESTA_PSEPU (Q6B6R8), ESTE_VIBMI (Q07792), ESTP_PSEPK (Q88QS0), EXL1_ARATH (Q94CH8), EXL2_ARATH (Q94CH7), EXL3_ARATH (Q94CH6), EXL4_ARATH (Q0WUV7), EXL5_ARATH (Q94CH5), EXL6_ARATH (Q93X94), GCAT_AERHY (P10480), GDL24_ARATH (Q9C653), GDL25_ARATH (Q3ECM4), GDL26_ARATH (F4IBF0), GDL27_ARATH (P0DI15), GDL28_ARATH (Q9FVV1), GDL30_ARATH (Q9C9V0), GDL4_ARATH (P0DKJ6), GDL52_ARATH (Q9LH73), GDL55_ARATH (Q3EAQ9), GDL56_ARATH (Q9FYD3), GDL5_ARATH (Q9ZUE4), GDL72_ARATH (Q9FFN0), GDL73_ARATH (Q9LZC5), GDL87_ARATH (Q9FIA1), GDL89_ARATH (Q9FMK6), GLIP1_ARATH (Q9FLN0), GLIP2_ARATH (Q9SYF0), GLIP3_ARATH (Q9SYF5), GRIP4_ARATH (Q9LJP1), HLT_VIBPA (Q99289), LIP1_PHOLU (P40601), PLB1_CAVPO (O70320), PLB1_HUMAN (Q6P1J6), PLB1_MONDO (Q06HQ7), PLB1_MOUSE (Q3TTY0), PLB1_RABIT (Q05017), PLB1_RAT(O54728), TESA_ECOL6 (P0ADA2), TESA_ECOLI (P0ADA1), YTRP_PSEPU (P40604)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
124 sequences
AAE_RAUSE (Q3MKY2), AOAH_HUMAN (P28039), AOAH_MOUSE (O35298), AOAH_RABIT (O18823), APG2_ARATH (Q9LU14), AXE2_GEOSE (Q09LX1), CPR49_ARATH (Q9SRM5), ESM1_ARATH (Q9LJG3), EST_HEVBR (Q7Y1X1), EST_PSEAE (Q9HZY8), FUCO3_ARATH (Q9FXE5), GDL10_ARATH (Q9SHP6), GDL11_ARATH (Q3E7I6), GDL12_ARATH (Q9FPE4), GDL13_ARATH (Q38894), GDL14_ARATH (Q9C7N5), GDL15_ARATH (Q9C7N4), GDL16_ARATH (Q9C857), GDL17_ARATH (Q8L5Z1), GDL18_ARATH (Q1H583), GDL19_ARATH (Q8W4H8), GDL1_ARATH (Q9LMJ3), GDL1_CARPA (P86276), GDL20_ARATH (Q9C5N8), GDL21_ARATH (Q7XA74), GDL22_ARATH (Q3ECP6), GDL23_ARATH (Q9C648), GDL29_ARATH (Q9SF78), GDL2_ARATH (O80522), GDL31_ARATH (Q9CA68), GDL32_ARATH (Q9SIF5), GDL33_ARATH (Q9SIF3), GDL34_ARATH (Q9SJB4), GDL35_ARATH (O65921), GDL36_ARATH (O64468), GDL37_ARATH (O64469), GDL38_ARATH (O80470), GDL39_ARATH (Q9SJA9), GDL3_ARATH (Q9LMS5), GDL40_ARATH (Q9ZQI3), GDL41_ARATH (O22918), GDL42_ARATH (O22927), GDL43_ARATH (Q9SIQ3), GDL44_ARATH (Q9SIQ2), GDL45_ARATH (Q8RWJ4), GDL46_ARATH (O80443), GDL47_ARATH (Q9SIZ6), GDL48_ARATH (Q67ZI9), GDL49_ARATH (Q9MAA1), GDL50_ARATH (Q9SF94), GDL51_ARATH (Q9LJP2), GDL53_ARATH (Q9LIN2), GDL54_ARATH (Q9LII9), GDL57_ARATH (Q9STM6), GDL58_ARATH (Q9M2R9), GDL59_ARATH (Q0WPI9), GDL60_ARATH (Q6NLP7), GDL61_ARATH (Q9M153), GDL62_ARATH (Q680C0), GDL63_ARATH (O23469), GDL64_ARATH (O23470), GDL65_ARATH (Q93YW8), GDL66_ARATH (Q8VY93), GDL67_ARATH (Q9SVU5), GDL68_ARATH (Q9SZW7), GDL69_ARATH (Q9LZS9), GDL6_ARATH (Q9FXJ1), GDL70_ARATH (Q9LZS8), GDL71_ARATH (Q9LZS7), GDL74_ARATH (Q9LZB2), GDL75_ARATH (Q9FNP2), GDL76_ARATH (Q9LY84), GDL77_ARATH (Q5PNZ0), GDL78_ARATH (Q9FFC6), GDL79_ARATH (Q8LB81), GDL7_ARATH (Q9FXJ2), GDL80_ARATH (Q9FHQ1), GDL81_ARATH (Q9FJ25), GDL82_ARATH (Q9FK75), GDL83_ARATH (Q9FJ45), GDL84_ARATH (Q6NMR9), GDL85_ARATH (Q9FJ41), GDL86_ARATH (Q9FJ40), GDL88_ARATH (Q9FM04), GDL8_ARATH (Q8RXT9), GDL90_ARATH (Q9FHW9), GDL91_ARATH (P0C8Z7), GDL9_ARATH (Q94F40), GDSLL_MYCTU (O53423), GDSL_MYCTU (O33363), GLIP5_ARATH (Q9SSA7), GLIP6_ARATH (Q9C996), GLIP7_ARATH (Q8LFJ9), IAH1_BOVIN (Q3SZ16), IAH1_DANRE (Q503L4), IAH1_HUMAN (Q2TAA2), IAH1_MOUSE (Q9DB29), IAH1_RAT(Q711G3), IAH1_SCHPO (O74648), IAH1_YEAST (P41734), LIP1_STRCO (Q9S2A5), LIP2_STRCO (Q93J06), LIP4_ARATH (Q9FXB6), LIPC_BACLD (Q65NA4), LIPC_BACSU (P42969), LIP_STRRM (Q93MW7), LTL1_ARATH (Q9M8Y5), PA1B2_BOVIN (P68401), PA1B2_CHICK (Q5ZMS2), PA1B2_DROME (Q9VXP4), PA1B2_HUMAN (P68402), PA1B2_MOUSE (Q61206), PA1B2_PONAB (Q5R4G2), PA1B2_RAT (O35264), PA1B3_BOVIN (Q29460), PA1B3_HUMAN (Q15102), PA1B3_MOUSE (Q61205), PA1B3_PONAB (Q5R6X1), PA1B3_RAT (O35263), RHA1_ASPAC (Q00017), RHGT1_BACSU (O31523), RHGT2_BACSU (O31528), SSEJ_SALTY (Q9FD10), YXIM_BACSU (P42304)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
3 sequences
AAE_RAUVE (P86830), GDSLH_POPEU (P84985), SFAH_HELAN (P81098) |
| UniProtKB/Swiss-Prot False positive sequences |
5 sequences
CYF_SYNR3 (A5GRU7), NAGS_AJECN (A6RBX7), RGTB_RHIL3 (Q1MJ97), SMG8_MOUSE (Q8VE18), Y479_CLOAB (Q97LS5)» more |
| PDB [Detailed view] |
12 PDB
1IVN; 1J00; 1JRL; 1U8U; 1V2G; 3KVN; 5TIC; 5TID; 5TIE; 5TIF; 6LFB; 6LFC |