PROSITE logo

PROSITE entry PS01102


View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] ZF_DKSA_1
Accession [info] PS01102
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-APR-2006 DATA UPDATE;
13-SEP-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00846

Name and characterization of the entry

Description [info] Prokaryotic dksA C4-type zinc finger.
Pattern [info] 
C-[DESN]-x-[CTS]-x(3)-I-x(3)-[RK]-x(4)-P-x(4)-[CSLAT]-x(2)-[CAYF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_04 which contains 570'157 sequence entries.


Total number of hits 21 in 21 different sequences
Number of true positive hits 21 in 21 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.45 %

Comments [info]

Taxonomic range [info] Bacteriophages, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 21 sequences 

CP80_BP186  (P41059), DKSA_BUCAI  (P57294), DKSA_BUCAP  (Q8K9U5), 

DKSA_BUCBP  (Q89AR3), DKSA_CAUVC  (P0CAU3), DKSA_CAUVN  (B8H0C0), 
DKSA_ECO57  (P0ABS3), DKSA_ECOL6  (P0ABS2), DKSA_ECOLI  (P0ABS1), 
DKSA_HAEIN  (P43758), DKSA_SALTI  (P0A1G6), DKSA_SALTY  (P0A1G5), 
DKSA_SHIFL  (P0ABS4), G16O_BACSU  (P80872), TRAR_ECOLI  (P41065), 
Y1497_HAEIN (P44221), Y250_AQUAE  (O66611), YBII_ECOLI  (P41039), 
YLYA_BACSU  (Q45478), YO82_BPP2   (Q06424), YTEA_BACSU  (P42408)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

WOR3_CANAL  (Q5A6T8)


				
	

	

		PDB
[Detailed view]		
		
			16 PDB
			


			1TJL; 2KGO; 5VSW; 5W1S; 5W1T; 6N57; 6N58; 6PSQ; 6PSR; 6PSS; 6PST; 6PSU; 
			
				6PSV; 6PSW; 7KHE; 7KHI
			
			

			» more