PROSITE entry PS01103

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General information about the entry

Entry name [info]	ASD
Accession [info]	PS01103
Entry type [info]	PATTERN
Date [info]	01-NOV-1995 CREATED; 01-NOV-1995 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00847

Name and characterization of the entry

Description [info]	Aspartate-semialdehyde dehydrogenase signature.
Pattern [info]	[LIVM]-[SADN]-x(2)-C-x-R-[LIVM]-x(4)-[GSC]-H-[STA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.

Total number of hits	40 in 40 different sequences
Number of true positive hits	39 in 39 different sequences
Number of 'unknown' hits	0
Number of false positive hits	1
Number of false negative sequences	11
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	97.50 %
Recall (true positives / (true positives + false negatives))	78.00 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	39 sequences DHAS1_VIBCH (Q9KQG2), DHAS2_VIBCH (P23247), DHAS_ACTPL (Q44151), DHAS_AQUAE (O67716), DHAS_ARCFU (O28766), DHAS_AZOVI (P96198), DHAS_BACSU (Q04797), DHAS_BORPE (P41399), DHAS_BUCAI (P57523), DHAS_BUCAP (Q8K9B5), DHAS_BUCBP (Q89AB8), DHAS_CAMJE (Q59291), DHAS_CORFL (P41400), DHAS_CORGL (P0C1D8), DHAS_CORML (P0C1D9), DHAS_ECO57 (P0A9R0), DHAS_ECOL6 (Q8FCR6), DHAS_ECOLI (P0A9Q9), DHAS_HAEIN (P44801), DHAS_HELPJ (Q9ZK28), DHAS_HELPY (O25801), DHAS_LEPIC (Q75FC8), DHAS_LEPIN (P41394), DHAS_METJA (Q57658), DHAS_METTH (O26890), DHAS_MYCBO (P0A543), DHAS_MYCSM (P41404), DHAS_MYCTO (P9WNX4), DHAS_MYCTU (P9WNX5), DHAS_NEIMA (P57008), DHAS_NEIMB (P30903), DHAS_PSEAE (Q51344), DHAS_SALTI (P0A1F9), DHAS_SALTY (P0A1F8), DHAS_SHIFL (P0A9R1), DHAS_STRAK (Q53612), DHAS_STRMU (P10539), DHAS_VIBMI (Q60080), DHAS_YEAST (P13663) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	11 sequences DHAS_LEGPN (O31219), DHAS_PROMA (P49420), DHAS_RICBR (Q1RIB3), DHAS_RICCN (Q92IJ0), DHAS_RICFE (Q4UM57), DHAS_RICPR (Q9ZDL2), DHAS_RICTY (Q68X56), DHAS_SCHPO (P78780), DHAS_SHESP (Q56732), DHAS_SHEVD (Q56734), DHAS_SYNY3 (Q55512) » more
UniProtKB/Swiss-Prot False positive sequences	1 sequence CYAA_LACKL (P23466)
PDB [Detailed view]	25 PDB 1BRM; 1GL3; 1MB4; 1MC4; 1NWC; 1NWH; 1NX6; 1OZA; 1PQP; 1PR3; 1PU2; 1Q2X; 1T4B; 1T4D; 1TA4; 1TB4; 1YS4; 2QZ9; 2R00; 3PZR; 3Q0E; 3TZ6; 3VOS; 4R5M; 5BNT » more