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PROSITE entry PS01104


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PURL: https://purl.expasy.org/prosite/signature/PS01104

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General information about the entry

Entry name [info] RIBOSOMAL_L13E
Accession [info] PS01104
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00848

Name and characterization of the entry

Description [info] Ribosomal protein L13e signature.
Pattern [info] 
[KR]-x-G-[KR]-G-F-[ST]-[LVF]-x-E-[LVI]-x(3)-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 30 in 30 different sequences
Number of true positive hits 30 in 30 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 6
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 83.33 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 30 sequences 

RL131_ARATH (P41127), RL131_BRANA (P41128), RL132_ARATH (Q9SMT4), 

RL132_BRANA (P41129), RL133_ARATH (Q9FF90), RL13A_YEAST (Q12690), 
RL13B_YEAST (P40212), RL13E_AERPE (Q9YEN9), RL13E_SACS2 (Q97W05), 
RL13E_SULTO (P58469), RL13_BOVIN  (Q56JZ1), RL13_CAEEL  (P91128), 
RL13_CANAL  (O59931), RL13_CHICK  (P41125), RL13_CHLSW  (O48513), 
RL13_CRIGR  (Q9Z313), RL13_DANRE  (Q90Z10), RL13_DICDI  (Q54E20), 
RL13_DROME  (P41126), RL13_HUMAN  (P26373), RL13_ICTPU  (Q90YV5), 
RL13_LUMRU  (O46157), RL13_MAUEX  (Q876B2), RL13_MOUSE  (P47963), 
RL13_RAT(P41123), RL13_SCHMA  (Q95043), RL13_SCHPO  (O74175), 
RL13_SPOFR  (Q962U1), RL13_TETTS  (P0DJ58), RL13_TOBAC  (P49627)
» more

UniProtKB/Swiss-Prot
False negative sequences		 6 sequences 

RL13E_SACI1 (C3NMT7), RL13E_SACI2 (C3MKC0), RL13E_SACI3 (C3N178), 

RL13E_SACI4 (C3MU90), RL13E_SACI6 (C4KKE5), RL13E_SACI7 (C3N968)
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PDB
[Detailed view]		 358 PDB

pdb_00003j6x; pdb_00003j6y; pdb_00003j77; pdb_00003j78; pdb_00003jct; pdb_00004u3m; pdb_00004u3n; pdb_00004u3u; pdb_00004u4n; pdb_00004u4o; pdb_00004u4q; pdb_00004u4r; pdb_00004u4u; pdb_00004u4y; pdb_00004u4z; pdb_00004u50; pdb_00004u51; pdb_00004u52; pdb_00004u53; pdb_00004u55; pdb_00004u56; pdb_00004u6f; pdb_00004ug0; pdb_00004v6w; pdb_00004v6x; pdb_00004v7f; pdb_00004v88; pdb_00004v8p; pdb_00004v8t; pdb_00004v8y; pdb_00004v8z; pdb_00004v91; pdb_00005aj0; pdb_00005apn; pdb_00005apo; pdb_00005dat; pdb_00005dc3; pdb_00005dge; pdb_00005dgf; pdb_00005dgv; pdb_00005fci; pdb_00005fcj; pdb_00005gak; pdb_00005h4p; pdb_00005i4l; pdb_00005jcs; pdb_00005juo; pdb_00005jup; pdb_00005jus; pdb_00005jut; pdb_00005juu; pdb_00005lks; pdb_00005lyb; pdb_00005m1j; pdb_00005mc6; pdb_00005mei; pdb_00005ndg; pdb_00005ndv; pdb_00005ndw; pdb_00005obm; pdb_00005on6; pdb_00005t2c; pdb_00005t62; pdb_00005t6r; pdb_00005tbw; pdb_00005tga; pdb_00005tgm; pdb_00005z3g; pdb_00006c0f; pdb_00006cb1; pdb_00006elz; pdb_00006em1; pdb_00006em3; pdb_00006em4; pdb_00006em5; pdb_00006ft6; pdb_00006gq1; pdb_00006gqb; pdb_00006gqv; pdb_00006hd7; pdb_00006hhq; pdb_00006i7o; pdb_00006ip5; pdb_00006ip6; pdb_00006ip8; pdb_00006lqm; pdb_00006lsr; pdb_00006lss; pdb_00006lu8; pdb_00006m62; pdb_00006n8j; pdb_00006n8k; pdb_00006n8l; pdb_00006n8m; pdb_00006n8n; pdb_00006n8o; pdb_00006oig; pdb_00006ole; pdb_00006olf; pdb_00006olg; pdb_00006oli; pdb_00006olz; pdb_00006om0; pdb_00006om7; pdb_00006q8y; pdb_00006qik; pdb_00006qt0; pdb_00006qtz; pdb_00006qzp; pdb_00006r84; pdb_00006r86; pdb_00006r87; pdb_00006ri5; pdb_00006rzz; pdb_00006s05; pdb_00006s47; pdb_00006snt; pdb_00006sv4; pdb_00006swa; pdb_00006t4q; pdb_00006t7i; pdb_00006t7t; pdb_00006t83; pdb_00006tb3; pdb_00006tnu; pdb_00006w6l; pdb_00006woo; pdb_00006xa1; pdb_00006xiq; pdb_00006xir; pdb_00006xu6; pdb_00006xu7; pdb_00006xu8; pdb_00006y0g; pdb_00006y2l; pdb_00006y57; pdb_00006y6x; pdb_00006ylg; pdb_00006ylh; pdb_00006ylx; pdb_00006yly; pdb_00006z6j; pdb_00006z6k; pdb_00006z6l; pdb_00006z6m; pdb_00006z6n; pdb_00006zm7; pdb_00006zme; pdb_00006zmi; pdb_00006zmo; pdb_00007azy; pdb_00007b7d; pdb_00007bhp; pdb_00007bt6; pdb_00007btb; pdb_00007cpu; pdb_00007cpv; pdb_00007f5s; pdb_00007ls1; pdb_00007ls2; pdb_00007mpi; pdb_00007mpj; pdb_00007n8b; pdb_00007nac; pdb_00007nrc; pdb_00007nrd; pdb_00007of1; pdb_00007oh3; pdb_00007ohp; pdb_00007ohq; pdb_00007ohr; pdb_00007ohs; pdb_00007ohu; pdb_00007ohv; pdb_00007ohw; pdb_00007ohx; pdb_00007ohy; pdb_00007ow7; pdb_00007oya; pdb_00007oyb; pdb_00007pzy; pdb_00007q08; pdb_00007q0f; pdb_00007q0p; pdb_00007q0r; pdb_00007qgg; pdb_00007qvp; pdb_00007r6q; pdb_00007r7a; pdb_00007too; pdb_00007top; pdb_00007u0h; pdb_00007ug6; pdb_00007uoo; pdb_00007uqb; pdb_00007uqz; pdb_00007v08; pdb_00007xnx; pdb_00007xny; pdb_00007z34; pdb_00007zpq; pdb_00007zrs; pdb_00007zs5; pdb_00007zuw; pdb_00007zux; pdb_00007zw0; pdb_00008a3d; pdb_00008aaf; pdb_00008agt; pdb_00008agu; pdb_00008agv; pdb_00008agw; pdb_00008agx; pdb_00008agz; pdb_00008bip; pdb_00008bjq; pdb_00008bn3; pdb_00008bqd; pdb_00008bqx; pdb_00008c3a; pdb_00008ccs; pdb_00008cdl; pdb_00008cdr; pdb_00008ceh; pdb_00008cf5; pdb_00008cg8; pdb_00008cgn; pdb_00008civ; pdb_00008cku; pdb_00008cmj; pdb_00008e5t; pdb_00008esq; pdb_00008esr; pdb_00008etc; pdb_00008etg; pdb_00008eth; pdb_00008eti; pdb_00008etj; pdb_00008eub; pdb_00008eug; pdb_00008eui; pdb_00008eup; pdb_00008euy; pdb_00008ev3; pdb_00008evp; pdb_00008evq; pdb_00008evr; pdb_00008evs; pdb_00008evt; pdb_00008ewb; pdb_00008ewc; pdb_00008fkp; pdb_00008fkq; pdb_00008fkr; pdb_00008fks; pdb_00008fkt; pdb_00008fku; pdb_00008fkv; pdb_00008fkw; pdb_00008fkx; pdb_00008fky; pdb_00008fkz; pdb_00008fl2; pdb_00008fl3; pdb_00008fl4; pdb_00008fl6; pdb_00008fl7; pdb_00008fl9; pdb_00008fla; pdb_00008flb; pdb_00008flc; pdb_00008fld; pdb_00008fle; pdb_00008flf; pdb_00008g5y; pdb_00008g5z; pdb_00008g60; pdb_00008g61; pdb_00008glp; pdb_00008hfr; pdb_00008idt; pdb_00008idy; pdb_00008ie3; pdb_00008ifd; pdb_00008ife; pdb_00008ine; pdb_00008inf; pdb_00008ink; pdb_00008ipd; pdb_00008ipx; pdb_00008ipy; pdb_00008ir1; pdb_00008ir3; pdb_00008jdj; pdb_00008jdk; pdb_00008jdl; pdb_00008jdm; pdb_00008k2c; pdb_00008k2d; pdb_00008k82; pdb_00008ogj; pdb_00008oh6; pdb_00008ohd; pdb_00008oi5; pdb_00008oj0; pdb_00008oj3; pdb_00008oj5; pdb_00008oj8; pdb_00008p4v; pdb_00008p8m; pdb_00008p8n; pdb_00008p8u; pdb_00008p9a; pdb_00008pfr; pdb_00008q7z; pdb_00008q87; pdb_00008qfd; pdb_00008qoi; pdb_00008qyx; pdb_00008rl2; pdb_00008t2x; pdb_00008t2y; pdb_00008t2z; pdb_00008t30; pdb_00008t3a; pdb_00008t3b; pdb_00008t3c; pdb_00008t3d; pdb_00008t3e; pdb_00008t3f; pdb_00008ukb; pdb_00008ut0; pdb_00008uti; pdb_00008v83; pdb_00008v84; pdb_00008v87; pdb_00008xsx; pdb_00008xsy; pdb_00008xsz; pdb_00008xu8; pdb_00008y0u; pdb_00008y0w; pdb_00008y0x; pdb_00008yld; pdb_00008ylr; pdb_00008yoo; pdb_00008yop; pdb_00008z70; pdb_00008z71; pdb_00009axt; pdb_00009axu; pdb_00009axv; pdb_00009bh5; pdb_00009c3h; pdb_00009cai; pdb_00009f9s; pdb_00009g8m; pdb_00009gmo
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