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PROSITE entry PS01104


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General information about the entry

Entry name [info] RIBOSOMAL_L13E
Accession [info] PS01104
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00848

Name and characterization of the entry

Description [info] Ribosomal protein L13e signature.
Pattern [info] 
[KR]-x-G-[KR]-G-F-[ST]-[LVF]-x-E-[LVI]-x(3)-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 30 in 30 different sequences
Number of true positive hits 30 in 30 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 6
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 83.33 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 30 sequences 

RL131_ARATH (P41127), RL131_BRANA (P41128), RL132_ARATH (Q9SMT4), 

RL132_BRANA (P41129), RL133_ARATH (Q9FF90), RL13A_YEAST (Q12690), 
RL13B_YEAST (P40212), RL13E_AERPE (Q9YEN9), RL13E_SACS2 (Q97W05), 
RL13E_SULTO (P58469), RL13_BOVIN  (Q56JZ1), RL13_CAEEL  (P91128), 
RL13_CANAL  (O59931), RL13_CHICK  (P41125), RL13_CHLSW  (O48513), 
RL13_CRIGR  (Q9Z313), RL13_DANRE  (Q90Z10), RL13_DICDI  (Q54E20), 
RL13_DROME  (P41126), RL13_HUMAN  (P26373), RL13_ICTPU  (Q90YV5), 
RL13_KAZEX  (Q876B2), RL13_LUMRU  (O46157), RL13_MOUSE  (P47963), 
RL13_RAT(P41123), RL13_SCHMA  (Q95043), RL13_SCHPO  (O74175), 
RL13_SPOFR  (Q962U1), RL13_TETTS  (P0DJ58), RL13_TOBAC  (P49627)
» more

UniProtKB/Swiss-Prot
False negative sequences		 6 sequences 

RL13E_SULIA (C3N178), RL13E_SULIK (C4KKE5), RL13E_SULIL (C3MKC0), 

RL13E_SULIM (C3MU90), RL13E_SULIN (C3NMT7), RL13E_SULIY (C3N968)
» more

PDB
[Detailed view]		 304 PDB

3J6X; 3J6Y; 3J77; 3J78; 3JCT; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V6W; 4V6X; 4V7F; 4V88; 4V8P; 4V8T; 4V8Y; 4V8Z; 4V91; 5AJ0; 5APN; 5APO; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5GAK; 5H4P; 5I4L; 5JCS; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OBM; 5ON6; 5T2C; 5T62; 5T6R; 5TBW; 5TGA; 5TGM; 5Z3G; 6C0F; 6CB1; 6ELZ; 6EM1; 6EM3; 6EM4; 6EM5; 6FT6; 6GQ1; 6GQB; 6GQV; 6HD7; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6LQM; 6LSR; 6LSS; 6LU8; 6M62; 6N8J; 6N8K; 6N8L; 6N8M; 6N8N; 6N8O; 6OIG; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QIK; 6QT0; 6QTZ; 6QZP; 6R84; 6R86; 6R87; 6RI5; 6RZZ; 6S05; 6S47; 6SNT; 6SV4; 6SWA; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TNU; 6W6L; 6WOO; 6XA1; 6XIQ; 6XIR; 6XU6; 6XU7; 6XU8; 6Y0G; 6Y2L; 6Y57; 6Y6X; 6YLG; 6YLH; 6YLX; 6YLY; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZM7; 6ZME; 6ZMI; 6ZMO; 7AZY; 7B7D; 7BHP; 7BT6; 7BTB; 7CPU; 7CPV; 7F5S; 7LS1; 7LS2; 7MPI; 7MPJ; 7N8B; 7NAC; 7NRC; 7NRD; 7OF1; 7OH3; 7OHP; 7OHQ; 7OHR; 7OHS; 7OHU; 7OHV; 7OHW; 7OHX; 7OHY; 7OW7; 7OYA; 7OYB; 7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QGG; 7QVP; 7R6Q; 7R7A; 7TOO; 7TOP; 7U0H; 7UG6; 7UOO; 7UQB; 7UQZ; 7V08; 7XNX; 7XNY; 7Z34; 7ZPQ; 7ZRS; 7ZS5; 7ZUW; 7ZUX; 7ZW0; 8A3D; 8AAF; 8AGT; 8AGU; 8AGV; 8AGW; 8AGX; 8AGZ; 8BIP; 8BJQ; 8BN3; 8BQD; 8BQX; 8CCS; 8CDL; 8CDR; 8CEH; 8CF5; 8CG8; 8CGN; 8CIV; 8CKU; 8CMJ; 8E5T; 8ESQ; 8ESR; 8ETC; 8ETG; 8ETH; 8ETI; 8ETJ; 8EUB; 8EUG; 8EUI; 8EUP; 8EUY; 8EV3; 8EVP; 8EVQ; 8EVR; 8EVS; 8EVT; 8EWB; 8EWC; 8FKP; 8FKQ; 8FKR; 8FKS; 8FKT; 8FKU; 8FKV; 8FKW; 8FKX; 8FKY; 8FKZ; 8FL2; 8FL3; 8FL4; 8FL6; 8FL7; 8FL9; 8FLA; 8FLB; 8FLC; 8FLD; 8FLE; 8FLF; 8G5Y; 8G5Z; 8G60; 8G61; 8GLP; 8HFR; 8IDT; 8IDY; 8IE3; 8IFD; 8IFE; 8INE; 8INF; 8INK; 8IPD; 8IPX; 8IPY; 8IR1; 8IR3; 8JDJ; 8JDK; 8JDL; 8JDM; 8OHD; 8OJ0; 8OJ5; 8OJ8; 8QFD; 8Y0U; 8Y0W; 8Y0X
» more