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Entry: PS01104

General information about the entry

Entry name [info] RIBOSOMAL_L13E
Accession [info] PS01104
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE;
13-FEB-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00848

Name and characterization of the entry

Description [info] Ribosomal protein L13e signature.
Pattern [info] 
[KR]-x-G-[KR]-G-F-[ST]-[LVF]-x-E-[LVI]-x(3)-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_02 which contains 559'228 sequence entries.


Total number of hits 30 in 30 different sequences
Number of true positive hits 30 in 30 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 6
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 83.33 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 30 sequences 

RL131_ARATH (P41127    ), RL131_BRANA (P41128    ), RL132_ARATH (Q9SMT4    ), 

RL132_BRANA (P41129    ), RL133_ARATH (Q9FF90    ), RL13A_YEAST (Q12690    ), 
RL13B_YEAST (P40212    ), RL13E_AERPE (Q9YEN9    ), RL13E_SACS2 (Q97W05    ), 
RL13E_SULTO (P58469    ), RL13_BOVIN  (Q56JZ1    ), RL13_CAEEL  (P91128    ), 
RL13_CANAL  (O59931    ), RL13_CHICK  (P41125    ), RL13_CHLSW  (O48513    ), 
RL13_CRIGR  (Q9Z313    ), RL13_DANRE  (Q90Z10    ), RL13_DICDI  (Q54E20    ), 
RL13_DROME  (P41126    ), RL13_HUMAN  (P26373    ), RL13_ICTPU  (Q90YV5    ), 
RL13_LUMRU  (O46157    ), RL13_MOUSE  (P47963    ), RL13_RAT    (P41123    ), 
RL13_SACEX  (Q876B2    ), RL13_SCHMA  (Q95043    ), RL13_SCHPO  (O74175    ), 
RL13_SPOFR  (Q962U1    ), RL13_TETTS  (P0DJ58    ), RL13_TOBAC  (P49627    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 6 sequences 

RL13E_SULIA (C3N178    ), RL13E_SULIK (C4KKE5    ), RL13E_SULIL (C3MKC0    ), 

RL13E_SULIM (C3MU90    ), RL13E_SULIN (C3NMT7    ), RL13E_SULIY (C3N968    )
» more

PDB
[Detailed view]		 6 PDB

5Z3G; 6C0F; 6CB1; 6EM3; 6EM4; 6EM5

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