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Entry: PS01104

General information about the entry

Entry name [info] RIBOSOMAL_L13E
Accession [info] PS01104
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00848

Name and characterization of the entry

Description [info] Ribosomal protein L13e signature.
Pattern [info]
[KR]-x-G-[KR]-G-F-[ST]-[LVF]-x-E-[LVI]-x(3)-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 30 in 30 different sequences
Number of true positive hits 30 in 30 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 6
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 83.33 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
30 sequences

RL131_ARATH (P41127    ), RL131_BRANA (P41128    ), RL132_ARATH (Q9SMT4    ), 
RL132_BRANA (P41129    ), RL133_ARATH (Q9FF90    ), RL13A_YEAST (Q12690    ), 
RL13B_YEAST (P40212    ), RL13E_AERPE (Q9YEN9    ), RL13E_SACS2 (Q97W05    ), 
RL13E_SULTO (P58469    ), RL13_BOVIN  (Q56JZ1    ), RL13_CAEEL  (P91128    ), 
RL13_CANAL  (O59931    ), RL13_CHICK  (P41125    ), RL13_CHLSW  (O48513    ), 
RL13_CRIGR  (Q9Z313    ), RL13_DANRE  (Q90Z10    ), RL13_DICDI  (Q54E20    ), 
RL13_DROME  (P41126    ), RL13_HUMAN  (P26373    ), RL13_ICTPU  (Q90YV5    ), 
RL13_LUMRU  (O46157    ), RL13_MOUSE  (P47963    ), RL13_RAT    (P41123    ), 
RL13_SACEX  (Q876B2    ), RL13_SCHMA  (Q95043    ), RL13_SCHPO  (O74175    ), 
RL13_SPOFR  (Q962U1    ), RL13_TETTS  (P0DJ58    ), RL13_TOBAC  (P49627    )
» more

UniProtKB/Swiss-Prot
False negative sequences
6 sequences

RL13E_SULIA (C3N178    ), RL13E_SULIK (C4KKE5    ), RL13E_SULIL (C3MKC0    ), 
RL13E_SULIM (C3MU90    ), RL13E_SULIN (C3NMT7    ), RL13E_SULIY (C3N968    )
» more

PDB
[Detailed view]
123 PDB

3J6X; 3J6Y; 3J77; 3J78; 3JCT; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V6W; 4V6X; 4V7F; 4V88; 4V8P; 4V8T; 4V8Y; 4V8Z; 4V91; 5AJ0; 5APN; 5APO; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FL8; 5GAK; 5H4P; 5I4L; 5JCS; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OBM; 5ON6; 5T2C; 5T62; 5T6R; 5TBW; 5TGA; 5TGM; 5Z3G; 6C0F; 6CB1; 6EK0; 6ELZ; 6EM1; 6EM3; 6EM4; 6EM5; 6FT6; 6GQ1; 6GQB; 6GQV; 6HD7; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6N8J; 6N8K; 6N8L; 6N8M; 6N8N; 6N8O; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QIK; 6QT0; 6QTZ; 6QZP; 6R84; 6R86; 6R87; 6RI5; 6RZZ; 6S05; 6S47; 6SNT; 6SV4; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TNU; 6Y0G; 6Y2L; 6Y57
» more

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