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PROSITE entry PS01123


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PURL: https://purl.expasy.org/prosite/signature/PS01123

Direct ScanProsite submission
General information about the entry

Entry name [info] TNASE_1
Accession [info] PS01123
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-NOV-1997 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00865
Associated ProRule [info] PRU10048

Name and characterization of the entry

Description [info] Thermonuclease family signature 1.
Pattern [info]
D-G-D-T-[LIVM]-x-[LIVMC]-x(9,10)-R-[LIVM]-x(2)-[LIVM]-D-x-P-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 17 in 17 different sequences
Number of true positive hits 17 in 17 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 78
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 17.89 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 9
Site [info] active_site at position 16
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
17 sequences

NUC_SHIFL   (P29769), NUC_STAAC   (Q5HHM4), NUC_STAAM   (Q99VJ0), 
NUC_STAAN   (Q7A6P2), NUC_STAAR   (Q6GIK1), NUC_STAAS   (Q6GB41), 
NUC_STAAU   (P00644), NUC_STAAW   (Q8NXI6), NUC_STAHY   (P43270), 
NUC_STAIN   (P43269), PARB4_ECOLX (P22997), Y1296_HAEIN (Q57519), 
Y1439_METJA (Q58834), Y186_MYCGE  (P47432), Y6211_BACAN (Q9X397), 
YFI3_ECO57  (Q7BSX4), YFI3_ECOLX  (Q99342)
» more

UniProtKB/Swiss-Prot
False negative sequences
78 sequences

CAN1_ARATH  (F4IZC5), CAN2_ARATH  (F4IH31), CAN2_ORYSJ  (Q2RBJ2), 
CAN3_ORYSJ  (Q2QYR1), CAN4_ORYSJ  (Q2QUS0), HTP3_SAPPC  (A0A067CMC7), 
LCL3_AJEDR  (C5GB89), LCL3_ARTGP  (E4V094), LCL3_ARTOC  (C5FTB4), 
LCL3_ASPCL  (A1CRW4), LCL3_ASPFC  (B0XMZ5), LCL3_ASPFN  (B8MY73), 
LCL3_ASPFU  (Q4WK77), LCL3_ASPNC  (A2Q8K8), LCL3_ASPOR  (Q2URN2), 
LCL3_ASPTN  (Q0CUT8), LCL3_BOTFB  (A6RP27), LCL3_CANAL  (Q5AKW3), 
LCL3_CANAW  (C4YFU9), LCL3_CANDC  (B9W9Z5), LCL3_CANGA  (Q6FS62), 
LCL3_CANTT  (C5MC60), LCL3_CLAL4  (C4Y4X4), LCL3_COCP7  (C5P0Z4), 
LCL3_COLGM  (E3QWM6), LCL3_CRYGW  (E6R427), LCL3_DEBHA  (Q6BSY9), 
LCL3_EMENI  (Q5BGS2), LCL3_EREGS  (Q754Z2), LCL3_FUSV7  (C7YQ31), 
LCL3_KLULA  (Q6CMM1), LCL3_KOMPG  (C4QW04), LCL3_LACBS  (B0D7T0), 
LCL3_LACTC  (C5E2G4), LCL3_LEPMJ  (E4ZVE5), LCL3_LODEL  (A5E1Q5), 
LCL3_NAKDE  (Q874L8), LCL3_NEOFI  (A1D4S1), LCL3_PARBA  (C1H492), 
LCL3_PARBD  (C1GKM1), LCL3_PARBP  (C0SEQ8), LCL3_PENRW  (B6H1W0), 
LCL3_PHANO  (Q0UVH1), LCL3_PICGU  (A5DNZ8), LCL3_PICST  (A3GI61), 
LCL3_PODAN  (B2AU25), LCL3_PYRO7  (A4RMK0), LCL3_PYRTR  (B2WC78), 
LCL3_SCHCM  (D8QGA7), LCL3_SCHJY  (B6JYT1), LCL3_SCHPO  (O60168), 
LCL3_SCLS1  (A7ECE0), LCL3_TALMQ  (B6QNP4), LCL3_UNCRE  (C4JVW2), 
LCL3_VANPO  (A7TE94), LCL3_VERA1  (C9SI22), LCL3_YARLI  (Q6C427), 
LCL3_YEAS1  (B3LHF1), LCL3_YEAS2  (C7GW31), LCL3_YEAS6  (B5VIN9), 
LCL3_YEAS7  (A6ZU94), LCL3_YEAS8  (C8Z8G3), LCL3_YEAST  (P53153), 
LCL3_ZYGRC  (C5DZY8), SND1_BOVIN  (Q863B3), SND1_DANRE  (Q7ZT42), 
SND1_HUMAN  (Q7KZF4), SND1_MOUSE  (Q78PY7), SND1_PONAB  (Q5REU4), 
SND1_RAT(Q66X93), SND1_SCHPO  (Q9Y7U7), TSN1_ARATH  (Q8VZG7), 
TSN2_ARATH  (Q9FLT0), Y133_MYCPN  (P75265), Y38K_CAPSE  (Q39635), 
YHCR_BACSU  (P54602), YNCB_BACSU  (P94492), YOKF_BACSU  (O32001)
» more

PDB
[Detailed view]
224 PDB

pdb_00001eqv; pdb_00001ey0; pdb_00001ey4; pdb_00001ey5; pdb_00001ey6; pdb_00001ey7; pdb_00001ey8; pdb_00001ey9; pdb_00001eya; pdb_00001eyc; pdb_00001eyd; pdb_00001ez6; pdb_00001ez8; pdb_00001f2m; pdb_00001f2y; pdb_00001f2z; pdb_00001ihz; pdb_00001ii3; pdb_00001jok; pdb_00001joo; pdb_00001joq; pdb_00001jor; pdb_00001kaa; pdb_00001kab; pdb_00001kda; pdb_00001kdb; pdb_00001kdc; pdb_00001nsn; pdb_00001rkn; pdb_00001snc; pdb_00001snd; pdb_00001sno; pdb_00001snp; pdb_00001snq; pdb_00001sta; pdb_00001stg; pdb_00001sth; pdb_00001stn; pdb_00001sty; pdb_00001syb; pdb_00001syc; pdb_00001syd; pdb_00001sye; pdb_00001syf; pdb_00001syg; pdb_00001tqo; pdb_00001tr5; pdb_00001tt2; pdb_00001u9r; pdb_00002ey2; pdb_00002ey5; pdb_00002ey6; pdb_00002eyf; pdb_00002eyh; pdb_00002eyj; pdb_00002eyl; pdb_00002eym; pdb_00002eyo; pdb_00002eyp; pdb_00002f0d; pdb_00002f0e; pdb_00002f0f; pdb_00002f0g; pdb_00002f0h; pdb_00002f0i; pdb_00002f0j; pdb_00002f0k; pdb_00002f0l; pdb_00002f0m; pdb_00002f0n; pdb_00002f0o; pdb_00002f0p; pdb_00002f0q; pdb_00002f0s; pdb_00002f0t; pdb_00002f0u; pdb_00002f0v; pdb_00002f0w; pdb_00002f3v; pdb_00002f3w; pdb_00002khs; pdb_00002lkv; pdb_00002oeo; pdb_00002of1; pdb_00002oxp; pdb_00002pw5; pdb_00002pw7; pdb_00002pyk; pdb_00002pzt; pdb_00002pzu; pdb_00002pzw; pdb_00002rbm; pdb_00002rks; pdb_00002snm; pdb_00002sns; pdb_00002sob; pdb_00003bdc; pdb_00003c1e; pdb_00003c1f; pdb_00003d4d; pdb_00003d4w; pdb_00003d6c; pdb_00003d8g; pdb_00003dhq; pdb_00003dmu; pdb_00003e5s; pdb_00003ero; pdb_00003h6m; pdb_00003hej; pdb_00003hzx; pdb_00003itp; pdb_00003meh; pdb_00003mhb; pdb_00003mvv; pdb_00003mxp; pdb_00003mz5; pdb_00003nk9; pdb_00003nqt; pdb_00003nxw; pdb_00003owf; pdb_00003p75; pdb_00003r3o; pdb_00003ruz; pdb_00003s9w; pdb_00003sk8; pdb_00003sr1; pdb_00003sxh; pdb_00003t13; pdb_00003tp7; pdb_00003v2t; pdb_00004df7; pdb_00004dgz; pdb_00004du9; pdb_00004eqo; pdb_00004eqp; pdb_00004f8m; pdb_00004g57; pdb_00004h7b; pdb_00004hmi; pdb_00004hth; pdb_00004i65; pdb_00004ial; pdb_00004id6; pdb_00004iun; pdb_00004iz8; pdb_00004j1m; pdb_00004j6h; pdb_00004k14; pdb_00004k2l; pdb_00004k6d; pdb_00004k8i; pdb_00004k8j; pdb_00004kd4; pdb_00004kta; pdb_00004kv6; pdb_00004ky7; pdb_00004n9t; pdb_00004ndx; pdb_00004nkl; pdb_00004np5; pdb_00004odg; pdb_00004ol7; pdb_00004pmb; pdb_00004pmc; pdb_00004pny; pdb_00004qb4; pdb_00004qf4; pdb_00004r8n; pdb_00004rkb; pdb_00004trd; pdb_00004wor; pdb_00004wrd; pdb_00004yij; pdb_00004zq3; pdb_00004zuj; pdb_00005c3w; pdb_00005c3x; pdb_00005c4h; pdb_00005c5l; pdb_00005c5m; pdb_00005cc4; pdb_00005cgk; pdb_00005cr3; pdb_00005cv5; pdb_00005cv6; pdb_00005cv7; pdb_00005deh; pdb_00005e3f; pdb_00005egt; pdb_00005ekl; pdb_00005f2d; pdb_00005i6w; pdb_00005i6y; pdb_00005i9p; pdb_00005igd; pdb_00005ige; pdb_00005igf; pdb_00005igg; pdb_00005iif; pdb_00005ioc; pdb_00005iod; pdb_00005isr; pdb_00005j1z; pdb_00005j22; pdb_00005jav; pdb_00005k5p; pdb_00005kgu; pdb_00005kix; pdb_00005kru; pdb_00005kyi; pdb_00005kyl; pdb_00006eeg; pdb_00006eek; pdb_00006ok8; pdb_00006u0w; pdb_00006u0x; pdb_00006xsb; pdb_00006xse; pdb_00006xsf; pdb_00006xsg; pdb_00006xsh; pdb_00006xsi; pdb_00008k2t; pdb_00009cil
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