PROSITE entry PS01125
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General information about the entry
| Entry name [info] | ROK |
| Accession [info] | PS01125 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00866 |
Name and characterization of the entry
| Description [info] | ROK family signature. |
| Pattern [info] |
[LIVM]-x(2)-G-[LIVMFCT]-G-x-[GA]-[LIVMFA]-x(3)-{V}-x(4)-G-x(3,5)-[GATP]-
{G}-x-G-[RKH].
|
Numerical results [info]
| Total number of hits | 147 in 147 different sequences |
| Number of true positive hits | 144 in 144 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 3 in 3 different sequences |
| Number of false negative sequences | 24 |
| Number of 'partial' sequences | 2 |
| Precision (true positives / (true positives + false positives)) | 97.96 % |
| Recall (true positives / (true positives + false negatives)) | 85.71 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
144 sequences
AGAK_SHESA (A0KYQ6), ALSK_ECOLI (P32718), CYANR_KRIFD (D2PPN2), GLK_BACSU (P54495), GLK_HALH5 (Q9KCZ4), GLK_STAXY (Q56198), GLK_STRCO (P0A4E1), GLK_STRLI (P0A4E2), GLK_THEMA (Q9X1I0), MAK_ECOLI (P23917), NAGC_ECO57 (P0AF22), NAGC_ECOL6 (P0AF21), NAGC_ECOLI (P0AF20), NAGC_SHIFL (P0AF23), NAGK_ALIF1 (Q5E4Z3), NAGK_ALIFM (B5FEF2), NAGK_ALISL (B6EKQ4), NAGK_CITK8 (A8AHU6), NAGK_ECO24 (A7ZKM3), NAGK_ECO27 (B7UPY3), NAGK_ECO45 (B7MJA6), NAGK_ECO55 (B7LG53), NAGK_ECO57 (Q8X8E1), NAGK_ECO5E (B5YWJ2), NAGK_ECO7I (B7NKG0), NAGK_ECO81 (B7MTP9), NAGK_ECO8A (B7LX53), NAGK_ECOBW (C4ZS59), NAGK_ECODH (B1XA29), NAGK_ECOHS (A7ZZ76), NAGK_ECOK1 (A1AA13), NAGK_ECOL5 (Q0TIV5), NAGK_ECOL6 (Q8FIM5), NAGK_ECOLC (B1IUE6), NAGK_ECOLI (P75959), NAGK_ECOLU (B7NAZ7), NAGK_ECOSE (B6I9J7), NAGK_ECOSM (B1LI25), NAGK_ECOUT (Q1RD35), NAGK_ERWT9 (B2VDQ9), NAGK_ESCF3 (B7LPQ4), NAGK_HAEI8 (Q4QP08), NAGK_HAEIN (P44554), NAGK_HISS1 (Q0I4A5), NAGK_MANSM (Q65SC6), NAGK_PASMU (Q9CMX5), NAGK_PECAS (Q6D662), NAGK_PECCP (C6DKQ4), NAGK_PHOPR (Q6LRC2), NAGK_SALA4 (B5F8D3), NAGK_SALAR (A9MG95), NAGK_SALCH (Q57QD5), NAGK_SALDC (B5FK86), NAGK_SALEP (B5QXB6), NAGK_SALG2 (B5RB82), NAGK_SALHS (B4TFJ6), NAGK_SALNS (B4T3Q8), NAGK_SALPA (Q5PGR8), NAGK_SALPB (A9N4M6), NAGK_SALPC (C0Q772), NAGK_SALPK (B5BAF5), NAGK_SALSV (B4TTJ1), NAGK_SALTY (Q8ZPZ9), NAGK_SHIBS (Q31ZH6), NAGK_SHIDS (Q32EX9), NAGK_SHIF8 (Q0T5R7), NAGK_SHIFL (Q83RR9), NAGK_SHISS (Q3Z2Z8), NAGK_VIBA3 (B7VNU4), NAGK_VIBCH (Q9KRV2), NAGK_VIBPA (Q87PK8), NAGK_VIBVU (Q8D9M7), NAGK_VIBVY (Q7MKQ9), NAGK_YERE8 (A1JL75), NAGK_YERP3 (A7FH52), NAGK_YERPA (Q1C6R0), NAGK_YERPB (B2K721), NAGK_YERPE (Q0WGE8), NAGK_YERPN (Q1CI48), NAGK_YERPS (Q669P5), NAGK_YERPY (B1JI57), NANK1_ECOL6 (Q8FD60), NANK2_ECOL6 (Q8FDU8), NANK_CITK8 (A8AQB2), NANK_ECO24 (A7ZSB5), NANK_ECO27 (B7UJV5), NANK_ECO45 (B7MBY4), NANK_ECO55 (B7LHT0), NANK_ECO57 (Q8X9H0), NANK_ECO5E (B5YSU9), NANK_ECO7I (B7NKT3), NANK_ECOBW (C4ZSW0), NANK_ECODH (B1XHJ5), NANK_ECOHS (A8A532), NANK_ECOK1 (A1AGB6), NANK_ECOL5 (Q0TCP4), NANK_ECOLC (B1IQQ7), NANK_ECOLI (P45425), NANK_ECOSE (B6I1U0), NANK_ECOSM (B1LGI7), NANK_ESCF3 (B7LRJ0), NANK_HAEI8 (Q4QP43), NANK_HAEIE (A5UB07), NANK_HAEIG (A5UFU9), NANK_HAEIN (P44541), NANK_SALA4 (B5F7J6), NANK_SALAR (A9MNY9), NANK_SALDC (B5FIR5), NANK_SALEP (B5R0K9), NANK_SALG2 (B5RET4), NANK_SALHS (B4TJR0), NANK_SALNS (B4T747), NANK_SALPA (Q5PLF2), NANK_SALPB (A9N830), NANK_SALPK (B5BGP2), NANK_SALSV (B4TWI7), NANK_SALTI (Q8Z3F1), NANK_SALTY (Q8ZLQ8), NANK_SHIB3 (B2U1W2), NANK_SHIF8 (Q0T068), NANK_SHIFL (P59437), NANK_VIBC3 (A5F7C0), NANK_VIBCH (Q9KR61), NANK_VIBCM (C3LNA1), NANK_VIBVU (Q8D612), NANK_VIBVY (Q7MD31), NANK_YERP3 (A7FG96), NANK_YERPA (Q1C5U9), NANK_YERPB (B2K945), NANK_YERPE (Q8ZCG9), NANK_YERPG (A9QZJ5), NANK_YERPN (Q1CJY6), NANK_YERPP (A4TMJ3), NANK_YERPS (Q668J9), NANK_YERPY (B1JFW2), SCRK_BACSU (O05510), SCRK_PEDPE (P43468), SCRK_ZYMMO (Q03417), XYLR_BACSH (P16557), XYLR_BACSU (P94490), XYLR_CALBD (Q44406), XYLR_CALSR (P40981), XYLR_LACPE (P21940), XYLR_STAXY (P27159)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
24 sequences
ACBM_ACTS5 (Q8RIS8), BGLK_KLEPN (Q93LQ8), BGLK_LISIN (Q926Y3), BGLK_LISMO (Q8Y3R9), GLCNE_CRIGR (Q7TQ49), GLCNE_HUMAN (Q9Y223), GLCNE_MOUSE (Q91WG8), GLCNE_RAT (O35826), GLK_AERPE (Q9YA47), GLK_PYRCJ (A3MUZ0), MLC_ECOLI (P50456), NAGK_SALTI (Q8Z7H9), NANEK_BRUME (Q8YBP2), NANEK_BRUSU (Q8FWN5), NANK_PASMU (Q9CKB3), SCRK_LACLC (P82371), SCRK_STRMU (Q07211), VALC_STRHJ (Q3T6E2), VLDC_STRHL (Q15JG5), Y188_CLOPE (P26832), Y485_MYCTO (P9WKV0), Y485_MYCTU (P9WKV1), Y495_MYCBO (P64706), YPHH_ECOLI (P76586)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
SCRK_FUSMR (Q09123), SCRK_LACLL (Q09124) |
| UniProtKB/Swiss-Prot False positive sequences |
3 sequences
GLK_CUPMC (Q1LB18), U5928_DORVU (P0DUT6), YHKF_SCHPO (O94432) |
| PDB [Detailed view] |
9 PDB
1XC3; 2AA4; 2AP1; 3HTV; 3LM9; 3OHR; 4DB3; 6JDB; 6JDC |