PROSITE entry PS01125
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General information about the entry
| Entry name [info] | ROK |
| Accession [info] | PS01125 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00866 |
Name and characterization of the entry
| Description [info] | ROK family signature. |
| Pattern [info] |
[LIVM]-x(2)-G-[LIVMFCT]-G-x-[GA]-[LIVMFA]-x(3)-{V}-x(4)-G-x(3,5)-[GATP]-
{G}-x-G-[RKH].
|
Numerical results [info]
| Total number of hits | 147 in 147 different sequences |
| Number of true positive hits | 144 in 144 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 3 in 3 different sequences |
| Number of false negative sequences | 24 |
| Number of 'partial' sequences | 2 |
| Precision (true positives / (true positives + false positives)) | 97.96 % |
| Recall (true positives / (true positives + false negatives)) | 85.71 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
144 sequences
AGAK_SHESA (A0KYQ6 ), ALSK_ECOLI (P32718 ), CYANR_KRIFD (D2PPN2 ), GLK_BACSU (P54495 ), GLK_HALH5 (Q9KCZ4 ), GLK_STAXY (Q56198 ), GLK_STRCO (P0A4E1 ), GLK_STRLI (P0A4E2 ), GLK_THEMA (Q9X1I0 ), MAK_ECOLI (P23917 ), NAGC_ECO57 (P0AF22 ), NAGC_ECOL6 (P0AF21 ), NAGC_ECOLI (P0AF20 ), NAGC_SHIFL (P0AF23 ), NAGK_ALIF1 (Q5E4Z3 ), NAGK_ALIFM (B5FEF2 ), NAGK_ALISL (B6EKQ4 ), NAGK_CITK8 (A8AHU6 ), NAGK_ECO24 (A7ZKM3 ), NAGK_ECO27 (B7UPY3 ), NAGK_ECO45 (B7MJA6 ), NAGK_ECO55 (B7LG53 ), NAGK_ECO57 (Q8X8E1 ), NAGK_ECO5E (B5YWJ2 ), NAGK_ECO7I (B7NKG0 ), NAGK_ECO81 (B7MTP9 ), NAGK_ECO8A (B7LX53 ), NAGK_ECOBW (C4ZS59 ), NAGK_ECODH (B1XA29 ), NAGK_ECOHS (A7ZZ76 ), NAGK_ECOK1 (A1AA13 ), NAGK_ECOL5 (Q0TIV5 ), NAGK_ECOL6 (Q8FIM5 ), NAGK_ECOLC (B1IUE6 ), NAGK_ECOLI (P75959 ), NAGK_ECOLU (B7NAZ7 ), NAGK_ECOSE (B6I9J7 ), NAGK_ECOSM (B1LI25 ), NAGK_ECOUT (Q1RD35 ), NAGK_ERWT9 (B2VDQ9 ), NAGK_ESCF3 (B7LPQ4 ), NAGK_HAEI8 (Q4QP08 ), NAGK_HAEIN (P44554 ), NAGK_HAES1 (Q0I4A5 ), NAGK_MANSM (Q65SC6 ), NAGK_PASMU (Q9CMX5 ), NAGK_PECAS (Q6D662 ), NAGK_PECCP (C6DKQ4 ), NAGK_PHOPR (Q6LRC2 ), NAGK_SALA4 (B5F8D3 ), NAGK_SALAR (A9MG95 ), NAGK_SALCH (Q57QD5 ), NAGK_SALDC (B5FK86 ), NAGK_SALEP (B5QXB6 ), NAGK_SALG2 (B5RB82 ), NAGK_SALHS (B4TFJ6 ), NAGK_SALNS (B4T3Q8 ), NAGK_SALPA (Q5PGR8 ), NAGK_SALPB (A9N4M6 ), NAGK_SALPC (C0Q772 ), NAGK_SALPK (B5BAF5 ), NAGK_SALSV (B4TTJ1 ), NAGK_SALTY (Q8ZPZ9 ), NAGK_SHIBS (Q31ZH6 ), NAGK_SHIDS (Q32EX9 ), NAGK_SHIF8 (Q0T5R7 ), NAGK_SHIFL (Q83RR9 ), NAGK_SHISS (Q3Z2Z8 ), NAGK_VIBA3 (B7VNU4 ), NAGK_VIBCH (Q9KRV2 ), NAGK_VIBPA (Q87PK8 ), NAGK_VIBVU (Q8D9M7 ), NAGK_VIBVY (Q7MKQ9 ), NAGK_YERE8 (A1JL75 ), NAGK_YERP3 (A7FH52 ), NAGK_YERPA (Q1C6R0 ), NAGK_YERPB (B2K721 ), NAGK_YERPE (Q0WGE8 ), NAGK_YERPN (Q1CI48 ), NAGK_YERPS (Q669P5 ), NAGK_YERPY (B1JI57 ), NANK1_ECOL6 (Q8FD60 ), NANK2_ECOL6 (Q8FDU8 ), NANK_CITK8 (A8AQB2 ), NANK_ECO24 (A7ZSB5 ), NANK_ECO27 (B7UJV5 ), NANK_ECO45 (B7MBY4 ), NANK_ECO55 (B7LHT0 ), NANK_ECO57 (Q8X9H0 ), NANK_ECO5E (B5YSU9 ), NANK_ECO7I (B7NKT3 ), NANK_ECOBW (C4ZSW0 ), NANK_ECODH (B1XHJ5 ), NANK_ECOHS (A8A532 ), NANK_ECOK1 (A1AGB6 ), NANK_ECOL5 (Q0TCP4 ), NANK_ECOLC (B1IQQ7 ), NANK_ECOLI (P45425 ), NANK_ECOSE (B6I1U0 ), NANK_ECOSM (B1LGI7 ), NANK_ESCF3 (B7LRJ0 ), NANK_HAEI8 (Q4QP43 ), NANK_HAEIE (A5UB07 ), NANK_HAEIG (A5UFU9 ), NANK_HAEIN (P44541 ), NANK_SALA4 (B5F7J6 ), NANK_SALAR (A9MNY9 ), NANK_SALDC (B5FIR5 ), NANK_SALEP (B5R0K9 ), NANK_SALG2 (B5RET4 ), NANK_SALHS (B4TJR0 ), NANK_SALNS (B4T747 ), NANK_SALPA (Q5PLF2 ), NANK_SALPB (A9N830 ), NANK_SALPK (B5BGP2 ), NANK_SALSV (B4TWI7 ), NANK_SALTI (Q8Z3F1 ), NANK_SALTY (Q8ZLQ8 ), NANK_SHIB3 (B2U1W2 ), NANK_SHIF8 (Q0T068 ), NANK_SHIFL (P59437 ), NANK_VIBC3 (A5F7C0 ), NANK_VIBCH (Q9KR61 ), NANK_VIBCM (C3LNA1 ), NANK_VIBVU (Q8D612 ), NANK_VIBVY (Q7MD31 ), NANK_YERP3 (A7FG96 ), NANK_YERPA (Q1C5U9 ), NANK_YERPB (B2K945 ), NANK_YERPE (Q8ZCG9 ), NANK_YERPG (A9QZJ5 ), NANK_YERPN (Q1CJY6 ), NANK_YERPP (A4TMJ3 ), NANK_YERPS (Q668J9 ), NANK_YERPY (B1JFW2 ), SCRK_BACSU (O05510 ), SCRK_PEDPE (P43468 ), SCRK_ZYMMO (Q03417 ), XYLR_BACSH (P16557 ), XYLR_BACSU (P94490 ), XYLR_CALBD (Q44406 ), XYLR_CALSR (P40981 ), XYLR_LACPE (P21940 ), XYLR_STAXY (P27159 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
24 sequences
ACBM_ACTS5 (Q8RIS8 ), BGLK_KLEPN (Q93LQ8 ), BGLK_LISIN (Q926Y3 ), BGLK_LISMO (Q8Y3R9 ), GLCNE_CRIGR (Q7TQ49 ), GLCNE_HUMAN (Q9Y223 ), GLCNE_MOUSE (Q91WG8 ), GLCNE_RAT (O35826 ), GLK_AERPE (Q9YA47 ), GLK_PYRCJ (A3MUZ0 ), MLC_ECOLI (P50456 ), NAGK_SALTI (Q8Z7H9 ), NANEK_BRUME (Q8YBP2 ), NANEK_BRUSU (Q8FWN5 ), NANK_PASMU (Q9CKB3 ), SCRK_LACLC (P82371 ), SCRK_STRMU (Q07211 ), VALC_STRHJ (Q3T6E2 ), VLDC_STRHL (Q15JG5 ), Y188_CLOPE (P26832 ), Y485_MYCTO (P9WKV0 ), Y485_MYCTU (P9WKV1 ), Y495_MYCBO (P64706 ), YPHH_ECOLI (P76586 )» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
SCRK_FUSMR (Q09123 ), SCRK_LACLL (Q09124 ) |
| UniProtKB/Swiss-Prot False positive sequences |
3 sequences
GLK_CUPMC (Q1LB18 ), U5928_DORVU (P0DUT6 ), YHKF_SCHPO (O94432 ) |
| PDB [Detailed view] |
9 PDB
1XC3; 2AA4; 2AP1; 3HTV; 3LM9; 3OHR; 4DB3; 6JDB; 6JDC |