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Entry: PS01125

General information about the entry

Entry name [info] ROK
Accession [info] PS01125
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00866

Name and characterization of the entry

Description [info] ROK family signature.
Pattern [info]
[LIVM]-x(2)-G-[LIVMFCT]-G-x-[GA]-[LIVMFA]-x(3)-{V}-x(4)-G-x(3,5)-[GATP]-
{G}-x-G-[RKH].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 146 in 146 different sequences
Number of true positive hits 144 in 144 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 24
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 98.63 %
Recall (true positives / (true positives + false negatives)) 85.71 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
144 sequences

AGAK_SHESA  (A0KYQ6    ), ALSK_ECOLI  (P32718    ), CYANR_KRIFD (D2PPN2    ), 
GLK_BACHD   (Q9KCZ4    ), GLK_BACSU   (P54495    ), GLK_STAXY   (Q56198    ), 
GLK_STRCO   (P0A4E1    ), GLK_STRLI   (P0A4E2    ), GLK_THEMA   (Q9X1I0    ), 
MAK_ECOLI   (P23917    ), NAGC_ECO57  (P0AF22    ), NAGC_ECOL6  (P0AF21    ), 
NAGC_ECOLI  (P0AF20    ), NAGC_SHIFL  (P0AF23    ), NAGK_ALIF1  (Q5E4Z3    ), 
NAGK_ALIFM  (B5FEF2    ), NAGK_ALISL  (B6EKQ4    ), NAGK_CITK8  (A8AHU6    ), 
NAGK_ECO24  (A7ZKM3    ), NAGK_ECO27  (B7UPY3    ), NAGK_ECO45  (B7MJA6    ), 
NAGK_ECO55  (B7LG53    ), NAGK_ECO57  (Q8X8E1    ), NAGK_ECO5E  (B5YWJ2    ), 
NAGK_ECO7I  (B7NKG0    ), NAGK_ECO81  (B7MTP9    ), NAGK_ECO8A  (B7LX53    ), 
NAGK_ECOBW  (C4ZS59    ), NAGK_ECODH  (B1XA29    ), NAGK_ECOHS  (A7ZZ76    ), 
NAGK_ECOK1  (A1AA13    ), NAGK_ECOL5  (Q0TIV5    ), NAGK_ECOL6  (Q8FIM5    ), 
NAGK_ECOLC  (B1IUE6    ), NAGK_ECOLI  (P75959    ), NAGK_ECOLU  (B7NAZ7    ), 
NAGK_ECOSE  (B6I9J7    ), NAGK_ECOSM  (B1LI25    ), NAGK_ECOUT  (Q1RD35    ), 
NAGK_ERWT9  (B2VDQ9    ), NAGK_ESCF3  (B7LPQ4    ), NAGK_HAEI8  (Q4QP08    ), 
NAGK_HAEIN  (P44554    ), NAGK_HAES1  (Q0I4A5    ), NAGK_MANSM  (Q65SC6    ), 
NAGK_PASMU  (Q9CMX5    ), NAGK_PECAS  (Q6D662    ), NAGK_PECCP  (C6DKQ4    ), 
NAGK_PHOPR  (Q6LRC2    ), NAGK_SALA4  (B5F8D3    ), NAGK_SALAR  (A9MG95    ), 
NAGK_SALCH  (Q57QD5    ), NAGK_SALDC  (B5FK86    ), NAGK_SALEP  (B5QXB6    ), 
NAGK_SALG2  (B5RB82    ), NAGK_SALHS  (B4TFJ6    ), NAGK_SALNS  (B4T3Q8    ), 
NAGK_SALPA  (Q5PGR8    ), NAGK_SALPB  (A9N4M6    ), NAGK_SALPC  (C0Q772    ), 
NAGK_SALPK  (B5BAF5    ), NAGK_SALSV  (B4TTJ1    ), NAGK_SALTY  (Q8ZPZ9    ), 
NAGK_SHIBS  (Q31ZH6    ), NAGK_SHIDS  (Q32EX9    ), NAGK_SHIF8  (Q0T5R7    ), 
NAGK_SHIFL  (Q83RR9    ), NAGK_SHISS  (Q3Z2Z8    ), NAGK_VIBCH  (Q9KRV2    ), 
NAGK_VIBPA  (Q87PK8    ), NAGK_VIBTL  (B7VNU4    ), NAGK_VIBVU  (Q8D9M7    ), 
NAGK_VIBVY  (Q7MKQ9    ), NAGK_YERE8  (A1JL75    ), NAGK_YERP3  (A7FH52    ), 
NAGK_YERPA  (Q1C6R0    ), NAGK_YERPB  (B2K721    ), NAGK_YERPE  (Q0WGE8    ), 
NAGK_YERPN  (Q1CI48    ), NAGK_YERPS  (Q669P5    ), NAGK_YERPY  (B1JI57    ), 
NANK1_ECOL6 (Q8FD60    ), NANK2_ECOL6 (Q8FDU8    ), NANK_CITK8  (A8AQB2    ), 
NANK_ECO24  (A7ZSB5    ), NANK_ECO27  (B7UJV5    ), NANK_ECO45  (B7MBY4    ), 
NANK_ECO55  (B7LHT0    ), NANK_ECO57  (Q8X9H0    ), NANK_ECO5E  (B5YSU9    ), 
NANK_ECO7I  (B7NKT3    ), NANK_ECOBW  (C4ZSW0    ), NANK_ECODH  (B1XHJ5    ), 
NANK_ECOHS  (A8A532    ), NANK_ECOK1  (A1AGB6    ), NANK_ECOL5  (Q0TCP4    ), 
NANK_ECOLC  (B1IQQ7    ), NANK_ECOLI  (P45425    ), NANK_ECOSE  (B6I1U0    ), 
NANK_ECOSM  (B1LGI7    ), NANK_ESCF3  (B7LRJ0    ), NANK_HAEI8  (Q4QP43    ), 
NANK_HAEIE  (A5UB07    ), NANK_HAEIG  (A5UFU9    ), NANK_HAEIN  (P44541    ), 
NANK_SALA4  (B5F7J6    ), NANK_SALAR  (A9MNY9    ), NANK_SALDC  (B5FIR5    ), 
NANK_SALEP  (B5R0K9    ), NANK_SALG2  (B5RET4    ), NANK_SALHS  (B4TJR0    ), 
NANK_SALNS  (B4T747    ), NANK_SALPA  (Q5PLF2    ), NANK_SALPB  (A9N830    ), 
NANK_SALPK  (B5BGP2    ), NANK_SALSV  (B4TWI7    ), NANK_SALTI  (Q8Z3F1    ), 
NANK_SALTY  (Q8ZLQ8    ), NANK_SHIB3  (B2U1W2    ), NANK_SHIF8  (Q0T068    ), 
NANK_SHIFL  (P59437    ), NANK_VIBC3  (A5F7C0    ), NANK_VIBCH  (Q9KR61    ), 
NANK_VIBCM  (C3LNA1    ), NANK_VIBVU  (Q8D612    ), NANK_VIBVY  (Q7MD31    ), 
NANK_YERP3  (A7FG96    ), NANK_YERPA  (Q1C5U9    ), NANK_YERPB  (B2K945    ), 
NANK_YERPE  (Q8ZCG9    ), NANK_YERPG  (A9QZJ5    ), NANK_YERPN  (Q1CJY6    ), 
NANK_YERPP  (A4TMJ3    ), NANK_YERPS  (Q668J9    ), NANK_YERPY  (B1JFW2    ), 
SCRK_BACSU  (O05510    ), SCRK_PEDPE  (P43468    ), SCRK_ZYMMO  (Q03417    ), 
XYLR_BACPZ  (P16557    ), XYLR_BACSU  (P94490    ), XYLR_CALBD  (Q44406    ), 
XYLR_CALSR  (P40981    ), XYLR_LACPE  (P21940    ), XYLR_STAXY  (P27159    )
» more

UniProtKB/Swiss-Prot
False negative sequences
24 sequences

ACBM_ACTS5  (Q8RIS8    ), BGLK_KLEPN  (Q93LQ8    ), BGLK_LISIN  (Q926Y3    ), 
BGLK_LISMO  (Q8Y3R9    ), GLCNE_CRIGR (Q7TQ49    ), GLCNE_HUMAN (Q9Y223    ), 
GLCNE_MOUSE (Q91WG8    ), GLCNE_RAT   (O35826    ), GLK_AERPE   (Q9YA47    ), 
GLK_PYRCJ   (A3MUZ0    ), MLC_ECOLI   (P50456    ), NAGK_SALTI  (Q8Z7H9    ), 
NANEK_BRUME (Q8YBP2    ), NANEK_BRUSU (Q8FWN5    ), NANK_PASMU  (Q9CKB3    ), 
SCRK_LACLC  (P82371    ), SCRK_STRMU  (Q07211    ), VALC_STRHJ  (Q3T6E2    ), 
VLDC_STRHL  (Q15JG5    ), Y188_CLOPE  (P26832    ), Y485_MYCTO  (P9WKV0    ), 
Y485_MYCTU  (P9WKV1    ), Y495_MYCBO  (P64706    ), YPHH_ECOLI  (P76586    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

SCRK_FUSMR  (Q09123    ), SCRK_LACLL  (Q09124    )

		
UniProtKB/Swiss-Prot
False positive sequences
2 sequences

GLK_CUPMC   (Q1LB18    ), YHKF_SCHPO  (O94432    )

		
PDB
[Detailed view]
9 PDB

1XC3; 2AA4; 2AP1; 3HTV; 3LM9; 3OHR; 4DB3; 6JDB; 6JDC

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