PROSITE entry PS01130

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General information about the entry

Entry name [info]	SLC26A
Accession [info]	PS01130
Entry type [info]	PATTERN
Date [info]	01-NOV-1995 CREATED; 01-DEC-2004 DATA UPDATE; 03-MAY-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00870

Name and characterization of the entry

Description [info]	SLC26A transporters signature.
Pattern [info]	[PAV]-x-[FYLCVI]-[GS]-L-Y-[STAG]-[STAGL]-x(4)-[LIVFYA]-[LIVMST]-[YI]- x(3)-[GA]-[GST]-[SRV]-[KRNP].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_02 which contains 569'516 sequence entries.

Total number of hits	50 in 50 different sequences
Number of true positive hits	50 in 50 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	12
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	80.65 %

Comments [info]

Taxonomic range [info]	Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

50 sequences

CYS14_NEUCR (P23622    ), DAUA_ECO57  (P0AFR3    ), DAUA_ECOLI  (P0AFR2    ),

NO70_SOYBN  (Q02920    ), S2611_BOVIN (Q58DD2    ), S2611_HUMAN (Q86WA9    ), 
S2611_MOUSE (Q80ZD3    ), S26A1_HUMAN (Q9H2B4    ), S26A1_MOUSE (P58735    ), 
S26A1_RAT   (P45380    ), S26A2_BOVIN (Q9BEG8    ), S26A2_BUBBU (Q69DJ1    ), 
S26A2_HORSE (Q65AC2    ), S26A2_HUMAN (P50443    ), S26A2_MOUSE (Q62273    ), 
S26A2_RAT   (O70531    ), S26A2_SHEEP (Q9GJY3    ), S26A3_HUMAN (P40879    ), 
S26A3_MOUSE (Q9WVC8    ), S26A3_RAT   (Q924C9    ), S26A4_HUMAN (O43511    ), 
S26A4_MOUSE (Q9R155    ), S26A4_RAT   (Q9R154    ), S26A5_HUMAN (P58743    ), 
S26A5_MERUN (Q9JKQ2    ), S26A5_MOUSE (Q99NH7    ), S26A5_RAT   (Q9EPH0    ), 
S26A6_HUMAN (Q9BXS9    ), S26A6_MOUSE (Q8CIW6    ), SUL1_YEAST  (P38359    ), 
SUL2_YEAST  (Q12325    ), SULH1_SCHPO (O74377    ), SULP3_CAEEL (Q94225    ), 
SULX_YEAST  (P53394    ), SUT11_ARATH (Q9SAY1    ), SUT12_ARATH (Q9MAX3    ), 
SUT13_ARATH (Q9FEP7    ), SUT1_STYHA  (P53391    ), SUT21_ARATH (O04722    ), 
SUT22_ARATH (P92946    ), SUT2_STYHA  (P53392    ), SUT31_ARATH (Q9SV13    ), 
SUT32_ARATH (O04289    ), SUT33_ARATH (Q9SXS2    ), SUT34_ARATH (Q9LW86    ), 
SUT35_ARATH (Q94LW6    ), SUT3_STYHA  (P53393    ), SUT41_ARATH (Q9FY46    ), 
SUT42_ARATH (Q8GYH8    ), YBAR_BACSU  (P55189    )

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

12 sequences

S2610_HUMAN (Q8NG04    ), S2610_MOUSE (Q5EBI0    ), S26A7_HUMAN (Q8TE54    ),

S26A7_MOUSE (Q8R2Z3    ), S26A7_PONAB (Q5RAL2    ), S26A7_RABIT (Q8HY59    ), 
S26A8_BOVIN (A6QNW6    ), S26A8_HUMAN (Q96RN1    ), S26A8_MACFA (Q4R445    ), 
S26A8_MOUSE (Q8R0C3    ), SULH2_SCHPO (Q9URY8    ), SULH3_SCHPO (O59782    )

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PDB
[Detailed view]

6 PDB

7LGU; 7LGW; 7LH2; 7LH3; 7LHV; 7SUN