PROSITE entry PS01130
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General information about the entry
Entry name [info] | SLC26A |
Accession [info] | PS01130 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00870 |
Name and characterization of the entry
Description [info] | SLC26A transporters signature. |
Pattern [info] |
[PAV]-x-[FYLCVI]-[GS]-L-Y-[STAG]-[STAGL]-x(4)-[LIVFYA]-[LIVMST]-[YI]- x(3)-[GA]-[GST]-[SRV]-[KRNP]. |
Numerical results [info]
Total number of hits | 50 in 50 different sequences |
Number of true positive hits | 50 in 50 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 12 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 80.65 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
50 sequences
CYS14_NEUCR (P23622 ), DAUA_ECO57 (P0AFR3 ), DAUA_ECOLI (P0AFR2 ), NO70_SOYBN (Q02920 ), S2611_BOVIN (Q58DD2 ), S2611_HUMAN (Q86WA9 ), S2611_MOUSE (Q80ZD3 ), S26A1_HUMAN (Q9H2B4 ), S26A1_MOUSE (P58735 ), S26A1_RAT (P45380 ), S26A2_BOVIN (Q9BEG8 ), S26A2_BUBBU (Q69DJ1 ), S26A2_HORSE (Q65AC2 ), S26A2_HUMAN (P50443 ), S26A2_MOUSE (Q62273 ), S26A2_RAT (O70531 ), S26A2_SHEEP (Q9GJY3 ), S26A3_HUMAN (P40879 ), S26A3_MOUSE (Q9WVC8 ), S26A3_RAT (Q924C9 ), S26A4_HUMAN (O43511 ), S26A4_MOUSE (Q9R155 ), S26A4_RAT (Q9R154 ), S26A5_HUMAN (P58743 ), S26A5_MERUN (Q9JKQ2 ), S26A5_MOUSE (Q99NH7 ), S26A5_RAT (Q9EPH0 ), S26A6_HUMAN (Q9BXS9 ), S26A6_MOUSE (Q8CIW6 ), SUL1_YEAST (P38359 ), SUL2_YEAST (Q12325 ), SULH1_SCHPO (O74377 ), SULP3_CAEEL (Q94225 ), SULX_YEAST (P53394 ), SUT11_ARATH (Q9SAY1 ), SUT12_ARATH (Q9MAX3 ), SUT13_ARATH (Q9FEP7 ), SUT1_STYHA (P53391 ), SUT21_ARATH (O04722 ), SUT22_ARATH (P92946 ), SUT2_STYHA (P53392 ), SUT31_ARATH (Q9SV13 ), SUT32_ARATH (O04289 ), SUT33_ARATH (Q9SXS2 ), SUT34_ARATH (Q9LW86 ), SUT35_ARATH (Q94LW6 ), SUT3_STYHA (P53393 ), SUT41_ARATH (Q9FY46 ), SUT42_ARATH (Q8GYH8 ), YBAR_BACSU (P55189 )» more
|
UniProtKB/Swiss-Prot False negative sequences |
12 sequences
S2610_HUMAN (Q8NG04 ), S2610_MOUSE (Q5EBI0 ), S26A7_HUMAN (Q8TE54 ), S26A7_MOUSE (Q8R2Z3 ), S26A7_PONAB (Q5RAL2 ), S26A7_RABIT (Q8HY59 ), S26A8_BOVIN (A6QNW6 ), S26A8_HUMAN (Q96RN1 ), S26A8_MACFA (Q4R445 ), S26A8_MOUSE (Q8R0C3 ), SULH2_SCHPO (Q9URY8 ), SULH3_SCHPO (O59782 )» more |
PDB [Detailed view] |
6 PDB
7LGU; 7LGW; 7LH2; 7LH3; 7LHV; 7SUN |