PROSITE logo

PROSITE entry PS01145


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
PURL: https://purl.expasy.org/prosite/signature/PS01145

Direct ScanProsite submission
General information about the entry

Entry name [info] RIBOSOMAL_L34E
Accession [info] PS01145
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2001 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00882

Name and characterization of the entry

Description [info] Ribosomal protein L34e signature.
Pattern [info] 
[ST]-x-S-x-[KRQ]-x(4)-[KR]-[TL]-P-[GS]-[GN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 49 in 49 different sequences
Number of true positive hits 48 in 48 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 9
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.96 %
Recall (true positives / (true positives + false negatives)) 84.21 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 48 sequences 

RL341_ARATH (Q42351), RL342_ARATH (Q9FE65), RL343_ARATH (Q9LJW6), 

RL34A_SCHPO (O42846), RL34A_YEAST (P87262), RL34B_CANAL (A0A1D8PDZ1), 
RL34B_SCHPO (Q9URT8), RL34B_YEAST (P40525), RL34_AEDAL  (P45842), 
RL34_AERPE  (P58026), RL34_DANRE  (Q7ZWJ7), RL34_ENCCU  (Q8SSA2), 
RL34_HUMAN  (P49207), RL34_HYPBU  (A2BME5), RL34_ICTPU  (Q90YT5), 
RL34_METJA  (P54053), RL34_METKA  (Q8TZB2), RL34_METTH  (O26137), 
RL34_MOUSE  (Q9D1R9), RL34_OCHTR  (Q9NB34), RL34_PEA(P40590), 
RL34_PIG(Q29223), RL34_PYRAB  (Q9UZJ7), RL34_PYRAE  (Q8ZTJ2), 
RL34_PYRCJ  (A3MV68), RL34_PYRFU  (Q8U2L3), RL34_PYRHO  (O74006), 
RL34_PYRIL  (A1RRJ4), RL34_PYRNV  (B1YAJ9), RL34_RABIT  (G1TXG5), 
RL34_RAT(P11250), RL34_SACI1  (C3NH83), RL34_SACI2  (C3MQ85), 
RL34_SACI3  (C3N5V3), RL34_SACI4  (C3MVX7), RL34_SACI6  (C4KHI2), 
RL34_SACI7  (C3NEG9), RL34_SACS2  (Q97ZQ6), RL34_STAMF  (A3DND2), 
RL34_SULAC  (O05981), RL34_SULTO  (Q975K6), RL34_TETTS  (P0DJ23), 
RL34_THEGJ  (C5A259), RL34_THEKO  (Q5JJF7), RL34_THEON  (B6YSP0), 
RL34_THEPD  (A1RXV1), RL34_THESM  (C6A186), RL34_TOBAC  (P41098)
» more

UniProtKB/Swiss-Prot
False negative sequences		 9 sequences 

RL34_DICDI  (Q54LV8), RL34_META3  (A6UW33), RL34_METM5  (A4FYK0), 

RL34_METM6  (A9A697), RL34_METM7  (A6VJT2), RL34_METMP  (Q6LZK0), 
RL34_METS3  (A5UL62), RL34_METST  (Q2NFY3), RL34_METVS  (A6USC2)
» more

UniProtKB/Swiss-Prot
False positive sequences		 1 sequence 

CHO2_PARBA  (C1GZK1)


				
	

	

		PDB
[Detailed view]		
		
			413 PDB
			


			pdb_00003j6x; pdb_00003j6y; pdb_00003j77; pdb_00003j78; pdb_00003j7o; pdb_00003j7p; pdb_00003j7q; pdb_00003j7r; pdb_00003jag; pdb_00003jah; pdb_00003jai; pdb_00003jct; 
			
				pdb_00004adx; pdb_00004u3m; pdb_00004u3n; pdb_00004u3u; pdb_00004u4n; pdb_00004u4o; pdb_00004u4q; pdb_00004u4r; pdb_00004u4u; pdb_00004u4y; pdb_00004u4z; pdb_00004u50; 
				pdb_00004u51; pdb_00004u52; pdb_00004u53; pdb_00004u55; pdb_00004u56; pdb_00004u6f; pdb_00004ug0; pdb_00004v4n; pdb_00004v6i; pdb_00004v6u; pdb_00004v6x; pdb_00004v7f; 
				pdb_00004v88; pdb_00004v8p; pdb_00004v8t; pdb_00004v8y; pdb_00004v8z; pdb_00004v91; pdb_00005aj0; pdb_00005apn; pdb_00005apo; pdb_00005dat; pdb_00005dc3; pdb_00005dge; 
				pdb_00005dgf; pdb_00005dgv; pdb_00005fci; pdb_00005fcj; pdb_00005gak; pdb_00005h4p; pdb_00005i4l; pdb_00005jcs; pdb_00005juo; pdb_00005jup; pdb_00005jus; pdb_00005jut; 
				pdb_00005juu; pdb_00005lks; pdb_00005lyb; pdb_00005lzs; pdb_00005lzt; pdb_00005lzu; pdb_00005lzv; pdb_00005lzw; pdb_00005m1j; pdb_00005mc6; pdb_00005mei; pdb_00005ndg; 
				pdb_00005ndv; pdb_00005ndw; pdb_00005obm; pdb_00005on6; pdb_00005t2c; pdb_00005t62; pdb_00005t6r; pdb_00005tbw; pdb_00005tga; pdb_00005tgm; pdb_00006cb1; pdb_00006d90; 
				pdb_00006d9j; pdb_00006elz; pdb_00006em5; pdb_00006ft6; pdb_00006ftg; pdb_00006fti; pdb_00006ftj; pdb_00006gq1; pdb_00006gqb; pdb_00006gqv; pdb_00006hd7; pdb_00006hhq; 
				pdb_00006i7o; pdb_00006ip5; pdb_00006ip6; pdb_00006ip8; pdb_00006lqm; pdb_00006lsr; pdb_00006lss; pdb_00006lu8; pdb_00006m62; pdb_00006mtd; pdb_00006mte; pdb_00006n8j; 
				pdb_00006n8k; pdb_00006n8l; pdb_00006n8m; pdb_00006n8n; pdb_00006n8o; pdb_00006oig; pdb_00006ole; pdb_00006olf; pdb_00006olg; pdb_00006oli; pdb_00006olz; pdb_00006om0; 
				pdb_00006om7; pdb_00006p5i; pdb_00006p5j; pdb_00006p5k; pdb_00006p5n; pdb_00006q8y; pdb_00006qik; pdb_00006qt0; pdb_00006qtz; pdb_00006qzp; pdb_00006r5q; pdb_00006r6g; 
				pdb_00006r6p; pdb_00006r7q; pdb_00006r84; pdb_00006r86; pdb_00006r87; pdb_00006ri5; pdb_00006rzz; pdb_00006s05; pdb_00006s47; pdb_00006sgc; pdb_00006skf; pdb_00006skg; 
				pdb_00006snt; pdb_00006sv4; pdb_00006swa; pdb_00006t4q; pdb_00006t59; pdb_00006t7i; pdb_00006t7t; pdb_00006t83; pdb_00006tb3; pdb_00006th6; pdb_00006tnu; pdb_00006w6l; 
				pdb_00006woo; pdb_00006xa1; pdb_00006xiq; pdb_00006xir; pdb_00006y0g; pdb_00006y2l; pdb_00006y57; pdb_00006y6x; pdb_00006ylg; pdb_00006ylh; pdb_00006ylx; pdb_00006yly; 
				pdb_00006z6j; pdb_00006z6k; pdb_00006z6l; pdb_00006z6m; pdb_00006z6n; pdb_00006zm7; pdb_00006zme; pdb_00006zmi; pdb_00006zmo; pdb_00006zvk; pdb_00007a01; pdb_00007azy; 
				pdb_00007b7d; pdb_00007bhp; pdb_00007bt6; pdb_00007btb; pdb_00007cpu; pdb_00007cpv; pdb_00007f5s; pdb_00007ls1; pdb_00007ls2; pdb_00007mdz; pdb_00007mpi; pdb_00007mpj; 
				pdb_00007n8b; pdb_00007nac; pdb_00007nad; pdb_00007nfx; pdb_00007nrc; pdb_00007nrd; pdb_00007nwg; pdb_00007nwh; pdb_00007nwi; pdb_00007o7y; pdb_00007o7z; pdb_00007o80; 
				pdb_00007o81; pdb_00007obr; pdb_00007of1; pdb_00007oh3; pdb_00007ohq; pdb_00007ohr; pdb_00007ow7; pdb_00007oya; pdb_00007oyb; pdb_00007oyd; pdb_00007pzy; pdb_00007q08; 
				pdb_00007q0f; pdb_00007q0p; pdb_00007q0r; pdb_00007qep; pdb_00007qwq; pdb_00007qwr; pdb_00007qws; pdb_00007r6k; pdb_00007r72; pdb_00007r7a; pdb_00007tm3; pdb_00007too; 
				pdb_00007top; pdb_00007toq; pdb_00007tor; pdb_00007tut; pdb_00007u0h; pdb_00007ucj; pdb_00007uck; pdb_00007ug6; pdb_00007uoo; pdb_00007uqb; pdb_00007uqz; pdb_00007v08; 
				pdb_00007xnx; pdb_00007xny; pdb_00007z34; pdb_00007zjw; pdb_00007zjx; pdb_00007zpq; pdb_00007zrs; pdb_00007zs5; pdb_00007zuw; pdb_00007zux; pdb_00007zw0; pdb_00008a3d; 
				pdb_00008aaf; pdb_00008agt; pdb_00008agu; pdb_00008agv; pdb_00008agw; pdb_00008agx; pdb_00008agz; pdb_00008azw; pdb_00008b2l; pdb_00008b5l; pdb_00008b6c; pdb_00008bhf; 
				pdb_00008bip; pdb_00008bjq; pdb_00008bn3; pdb_00008bpo; pdb_00008bqd; pdb_00008bqx; pdb_00008btk; pdb_00008c3a; pdb_00008ccs; pdb_00008cdl; pdb_00008cdr; pdb_00008ceh; 
				pdb_00008cf5; pdb_00008cg8; pdb_00008cgn; pdb_00008civ; pdb_00008cku; pdb_00008cmj; pdb_00008esq; pdb_00008esr; pdb_00008etc; pdb_00008etg; pdb_00008eub; pdb_00008eug; 
				pdb_00008eui; pdb_00008evp; pdb_00008evq; pdb_00008evr; pdb_00008evs; pdb_00008evt; pdb_00008ewb; pdb_00008ewc; pdb_00008fky; pdb_00008fkz; pdb_00008fl2; pdb_00008fl3; 
				pdb_00008fl4; pdb_00008fl6; pdb_00008fl7; pdb_00008fl9; pdb_00008fla; pdb_00008flb; pdb_00008flc; pdb_00008fld; pdb_00008fle; pdb_00008flf; pdb_00008g5y; pdb_00008g5z; 
				pdb_00008g60; pdb_00008g61; pdb_00008g6j; pdb_00008glp; pdb_00008hfr; pdb_00008hku; pdb_00008hkv; pdb_00008hky; pdb_00008hkz; pdb_00008hl1; pdb_00008hl2; pdb_00008hl3; 
				pdb_00008hl4; pdb_00008hl5; pdb_00008idt; pdb_00008idy; pdb_00008ie3; pdb_00008ifd; pdb_00008ife; pdb_00008ine; pdb_00008inf; pdb_00008ink; pdb_00008ipd; pdb_00008ipx; 
				pdb_00008ipy; pdb_00008ir1; pdb_00008ir3; pdb_00008jdj; pdb_00008jdk; pdb_00008jdl; pdb_00008jdm; pdb_00008k2c; pdb_00008k2d; pdb_00008k82; pdb_00008ogj; pdb_00008oh6; 
				pdb_00008ohd; pdb_00008oi5; pdb_00008oj0; pdb_00008oj3; pdb_00008oj5; pdb_00008oj8; pdb_00008p2k; pdb_00008p4v; pdb_00008p8m; pdb_00008p8n; pdb_00008p8u; pdb_00008p9a; 
				pdb_00008pfr; pdb_00008qfd; pdb_00008qoi; pdb_00008qyx; pdb_00008rjb; pdb_00008rjc; pdb_00008rjd; pdb_00008rl2; pdb_00008scb; pdb_00008t2x; pdb_00008t2y; pdb_00008t2z; 
				pdb_00008t30; pdb_00008t3a; pdb_00008t3b; pdb_00008t3c; pdb_00008t3d; pdb_00008t3e; pdb_00008t3f; pdb_00008ukb; pdb_00008ut0; pdb_00008uti; pdb_00008v87; pdb_00008vft; 
				pdb_00008xsx; pdb_00008xsy; pdb_00008xsz; pdb_00008xu8; pdb_00008y0u; pdb_00008y0w; pdb_00008y0x; pdb_00008yld; pdb_00008ylr; pdb_00008yoo; pdb_00008yop; pdb_00008z70; 
				pdb_00008z71; pdb_00009axt; pdb_00009axu; pdb_00009axv; pdb_00009bdl; pdb_00009bdn; pdb_00009bdp; pdb_00009c3h; pdb_00009e6q; pdb_00009e71; pdb_00009e7f; pdb_00009f1b; 
				pdb_00009f1c; pdb_00009f1d; pdb_00009f9s; pdb_00009g8m; pdb_00009gmo
			
			

			» more