PROSITE logo

PROSITE entry PS01145


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] RIBOSOMAL_L34E
Accession [info] PS01145
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2001 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00882

Name and characterization of the entry

Description [info] Ribosomal protein L34e signature.
Pattern [info] 
[ST]-x-S-x-[KRQ]-x(4)-[KR]-[TL]-P-[GS]-[GN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 49 in 49 different sequences
Number of true positive hits 48 in 48 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 9
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.96 %
Recall (true positives / (true positives + false negatives)) 84.21 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 48 sequences 

RL341_ARATH (Q42351), RL342_ARATH (Q9FE65), RL343_ARATH (Q9LJW6), 

RL34A_SCHPO (O42846), RL34A_YEAST (P87262), RL34B_CANAL (A0A1D8PDZ1), 
RL34B_SCHPO (Q9URT8), RL34B_YEAST (P40525), RL34_AEDAL  (P45842), 
RL34_AERPE  (P58026), RL34_DANRE  (Q7ZWJ7), RL34_ENCCU  (Q8SSA2), 
RL34_HUMAN  (P49207), RL34_HYPBU  (A2BME5), RL34_ICTPU  (Q90YT5), 
RL34_METJA  (P54053), RL34_METKA  (Q8TZB2), RL34_METTH  (O26137), 
RL34_MOUSE  (Q9D1R9), RL34_OCHTR  (Q9NB34), RL34_PEA(P40590), 
RL34_PIG(Q29223), RL34_PYRAB  (Q9UZJ7), RL34_PYRAE  (Q8ZTJ2), 
RL34_PYRCJ  (A3MV68), RL34_PYRFU  (Q8U2L3), RL34_PYRHO  (O74006), 
RL34_PYRIL  (A1RRJ4), RL34_PYRNV  (B1YAJ9), RL34_RABIT  (G1TXG5), 
RL34_RAT(P11250), RL34_SACS2  (Q97ZQ6), RL34_STAMF  (A3DND2), 
RL34_SULAC  (O05981), RL34_SULIA  (C3N5V3), RL34_SULIK  (C4KHI2), 
RL34_SULIL  (C3MQ85), RL34_SULIM  (C3MVX7), RL34_SULIN  (C3NH83), 
RL34_SULIY  (C3NEG9), RL34_SULTO  (Q975K6), RL34_TETTS  (P0DJ23), 
RL34_THEGJ  (C5A259), RL34_THEKO  (Q5JJF7), RL34_THEON  (B6YSP0), 
RL34_THEPD  (A1RXV1), RL34_THESM  (C6A186), RL34_TOBAC  (P41098)
» more

UniProtKB/Swiss-Prot
False negative sequences		 9 sequences 

RL34_DICDI  (Q54LV8), RL34_META3  (A6UW33), RL34_METM5  (A4FYK0), 

RL34_METM6  (A9A697), RL34_METM7  (A6VJT2), RL34_METMP  (Q6LZK0), 
RL34_METS3  (A5UL62), RL34_METST  (Q2NFY3), RL34_METVS  (A6USC2)
» more

UniProtKB/Swiss-Prot
False positive sequences		 1 sequence 

CHO2_PARBA  (C1GZK1)


				
	

	

		PDB
[Detailed view]		
		
			350 PDB
			


			3J6X; 3J6Y; 3J77; 3J78; 3J7O; 3J7P; 3J7Q; 3J7R; 3JAG; 3JAH; 3JAI; 3JCT; 
			
				4ADX; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 
				4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4N; 4V6I; 4V6U; 4V6X; 4V7F; 
				4V88; 4V8P; 4V8T; 4V8Y; 4V8Z; 4V91; 5AJ0; 5APN; 5APO; 5DAT; 5DC3; 5DGE; 
				5DGF; 5DGV; 5FCI; 5FCJ; 5GAK; 5H4P; 5I4L; 5JCS; 5JUO; 5JUP; 5JUS; 5JUT; 
				5JUU; 5LKS; 5LYB; 5LZS; 5LZT; 5LZU; 5LZV; 5LZW; 5M1J; 5MC6; 5MEI; 5NDG; 
				5NDV; 5NDW; 5OBM; 5ON6; 5T2C; 5T62; 5T6R; 5TBW; 5TGA; 5TGM; 6CB1; 6D90; 
				6D9J; 6ELZ; 6EM5; 6FT6; 6FTG; 6FTI; 6FTJ; 6GQ1; 6GQB; 6GQV; 6HD7; 6HHQ; 
				6I7O; 6IP5; 6IP6; 6IP8; 6LQM; 6LSR; 6LSS; 6LU8; 6M62; 6MTD; 6MTE; 6N8J; 
				6N8K; 6N8L; 6N8M; 6N8N; 6N8O; 6OIG; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 
				6OM7; 6P5I; 6P5J; 6P5K; 6P5N; 6Q8Y; 6QIK; 6QT0; 6QTZ; 6QZP; 6R5Q; 6R6G; 
				6R6P; 6R7Q; 6R84; 6R86; 6R87; 6RI5; 6RZZ; 6S05; 6S47; 6SGC; 6SKF; 6SKG; 
				6SNT; 6SV4; 6SWA; 6T4Q; 6T59; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6W6L; 
				6WOO; 6XA1; 6XIQ; 6XIR; 6Y0G; 6Y2L; 6Y57; 6Y6X; 6YLG; 6YLH; 6YLX; 6YLY; 
				6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZVK; 7A01; 7AZY; 
				7B7D; 7BHP; 7BT6; 7BTB; 7CPU; 7CPV; 7F5S; 7LS1; 7LS2; 7MDZ; 7MPI; 7MPJ; 
				7N8B; 7NAC; 7NAD; 7NFX; 7NRC; 7NRD; 7NWG; 7NWH; 7NWI; 7O7Y; 7O7Z; 7O80; 
				7O81; 7OBR; 7OF1; 7OH3; 7OHQ; 7OHR; 7OW7; 7OYA; 7OYB; 7OYD; 7PZY; 7Q08; 
				7Q0F; 7Q0P; 7Q0R; 7QEP; 7QWQ; 7QWR; 7QWS; 7R6K; 7R72; 7R7A; 7TM3; 7TOO; 
				7TOP; 7TOQ; 7TOR; 7TUT; 7U0H; 7UCJ; 7UCK; 7UG6; 7UOO; 7UQB; 7UQZ; 7V08; 
				7XNX; 7XNY; 7Z34; 7ZJW; 7ZJX; 7ZPQ; 7ZRS; 7ZS5; 7ZUW; 7ZUX; 7ZW0; 8A3D; 
				8AAF; 8AGT; 8AGU; 8AGV; 8AGW; 8AGX; 8AGZ; 8AZW; 8B2L; 8B5L; 8B6C; 8BHF; 
				8BIP; 8BJQ; 8BN3; 8BPO; 8BQD; 8BQX; 8BTK; 8CCS; 8CDL; 8CDR; 8CEH; 8CF5; 
				8CG8; 8CGN; 8CIV; 8CKU; 8CMJ; 8ESQ; 8ESR; 8ETC; 8ETG; 8EUB; 8EUG; 8EUI; 
				8EVP; 8EVQ; 8EVR; 8EVS; 8EVT; 8EWB; 8EWC; 8FKY; 8FKZ; 8FL2; 8FL3; 8FL4; 
				8FL6; 8FL7; 8FL9; 8FLA; 8FLB; 8FLC; 8FLD; 8FLE; 8FLF; 8G5Y; 8G5Z; 8G60; 
				8G61; 8G6J; 8GLP; 8HFR; 8HKU; 8HKV; 8HKY; 8HKZ; 8HL1; 8HL2; 8HL3; 8HL4; 
				8HL5; 8IDT; 8IDY; 8IE3; 8IFD; 8IFE; 8INE; 8INF; 8INK; 8IPD; 8IPX; 8IPY; 
				8IR1; 8IR3; 8JDJ; 8JDK; 8JDL; 8JDM; 8OHD; 8OJ5; 8OJ8; 8P2K; 8QFD; 8Y0U; 
				8Y0W; 8Y0X
			
			

			» more