PROSITE entry PS01145
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General information about the entry
Entry name [info] | RIBOSOMAL_L34E |
Accession [info] | PS01145 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1995 CREATED;
01-DEC-2001 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00882 |
Name and characterization of the entry
Description [info] | Ribosomal protein L34e signature. |
Pattern [info] |
[ST]-x-S-x-[KRQ]-x(4)-[KR]-[TL]-P-[GS]-[GN]. |
Numerical results [info]
Total number of hits | 48 in 48 different sequences |
Number of true positive hits | 47 in 47 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 1 |
Number of false negative sequences | 9 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 97.92 % |
Recall (true positives / (true positives + false negatives)) | 83.93 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
47 sequences
RL341_ARATH (Q42351 ), RL342_ARATH (Q9FE65 ), RL343_ARATH (Q9LJW6 ), RL34A_SCHPO (O42846 ), RL34A_YEAST (P87262 ), RL34B_CANAL (A0A1D8PDZ1), RL34B_SCHPO (Q9URT8 ), RL34B_YEAST (P40525 ), RL34_AEDAL (P45842 ), RL34_AERPE (P58026 ), RL34_DANRE (Q7ZWJ7 ), RL34_ENCCU (Q8SSA2 ), RL34_HUMAN (P49207 ), RL34_HYPBU (A2BME5 ), RL34_ICTPU (Q90YT5 ), RL34_METJA (P54053 ), RL34_METKA (Q8TZB2 ), RL34_METTH (O26137 ), RL34_MOUSE (Q9D1R9 ), RL34_OCHTR (Q9NB34 ), RL34_PEA (P40590 ), RL34_PIG (Q29223 ), RL34_PYRAB (Q9UZJ7 ), RL34_PYRAE (Q8ZTJ2 ), RL34_PYRCJ (A3MV68 ), RL34_PYRFU (Q8U2L3 ), RL34_PYRHO (O74006 ), RL34_PYRIL (A1RRJ4 ), RL34_PYRNV (B1YAJ9 ), RL34_RAT (P11250 ), RL34_SACS2 (Q97ZQ6 ), RL34_STAMF (A3DND2 ), RL34_SULAC (O05981 ), RL34_SULIA (C3N5V3 ), RL34_SULIK (C4KHI2 ), RL34_SULIL (C3MQ85 ), RL34_SULIM (C3MVX7 ), RL34_SULIN (C3NH83 ), RL34_SULIY (C3NEG9 ), RL34_SULTO (Q975K6 ), RL34_TETTS (P0DJ23 ), RL34_THEGJ (C5A259 ), RL34_THEKO (Q5JJF7 ), RL34_THEON (B6YSP0 ), RL34_THEPD (A1RXV1 ), RL34_THESM (C6A186 ), RL34_TOBAC (P41098 )» more
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UniProtKB/Swiss-Prot False negative sequences |
9 sequences
RL34_DICDI (Q54LV8 ), RL34_META3 (A6UW33 ), RL34_METM5 (A4FYK0 ), RL34_METM6 (A9A697 ), RL34_METM7 (A6VJT2 ), RL34_METMP (Q6LZK0 ), RL34_METS3 (A5UL62 ), RL34_METST (Q2NFY3 ), RL34_METVS (A6USC2 )» more |
UniProtKB/Swiss-Prot False positive sequences |
1 sequence
CHO2_PARBA (C1GZK1 ) |
PDB [Detailed view] |
191 PDB
3J6X; 3J6Y; 3J77; 3J78; 3J7O; 3J7P; 3J7Q; 3J7R; 3JCT; 4ADX; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4N; 4V6I; 4V6U; 4V6X; 4V7F; 4V88; 4V8P; 4V8T; 4V8Y; 4V8Z; 4V91; 5AJ0; 5APN; 5APO; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5GAK; 5H4P; 5I4L; 5JCS; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OBM; 5ON6; 5T2C; 5T62; 5T6R; 5TBW; 5TGA; 5TGM; 6CB1; 6ELZ; 6EM5; 6FT6; 6GQ1; 6GQB; 6GQV; 6HD7; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6LQM; 6LSR; 6LSS; 6LU8; 6M62; 6MTD; 6MTE; 6N8J; 6N8K; 6N8L; 6N8M; 6N8N; 6N8O; 6OIG; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QIK; 6QT0; 6QTZ; 6QZP; 6R84; 6R86; 6R87; 6RI5; 6RZZ; 6S05; 6S47; 6SKF; 6SKG; 6SNT; 6SV4; 6SWA; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6W6L; 6WOO; 6XA1; 6XIQ; 6XIR; 6Y0G; 6Y2L; 6Y57; 6Y6X; 6YLG; 6YLH; 6YLX; 6YLY; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZM7; 6ZME; 6ZMI; 6ZMO; 7AZY; 7B7D; 7BHP; 7BT6; 7BTB; 7CPU; 7CPV; 7F5S; 7LS1; 7LS2; 7MPI; 7MPJ; 7N8B; 7NAC; 7NAD; 7NRC; 7NRD; 7OF1; 7OH3; 7OHQ; 7OHR; 7OW7; 7OYA; 7OYB; 7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QEP; 7R6K; 7R72; 7R7A; 7TOO; 7TOP; 7Z34; 7ZW0 » more |