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PROSITE entry PS01145


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General information about the entry

Entry name [info] RIBOSOMAL_L34E
Accession [info] PS01145
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2001 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00882

Name and characterization of the entry

Description [info] Ribosomal protein L34e signature.
Pattern [info] 
[ST]-x-S-x-[KRQ]-x(4)-[KR]-[TL]-P-[GS]-[GN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.


Total number of hits 49 in 49 different sequences
Number of true positive hits 48 in 48 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 9
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.96 %
Recall (true positives / (true positives + false negatives)) 84.21 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 48 sequences 

RL341_ARATH (Q42351), RL342_ARATH (Q9FE65), RL343_ARATH (Q9LJW6), 

RL34A_SCHPO (O42846), RL34A_YEAST (P87262), RL34B_CANAL (A0A1D8PDZ1), 
RL34B_SCHPO (Q9URT8), RL34B_YEAST (P40525), RL34_AEDAL  (P45842), 
RL34_AERPE  (P58026), RL34_DANRE  (Q7ZWJ7), RL34_ENCCU  (Q8SSA2), 
RL34_HUMAN  (P49207), RL34_HYPBU  (A2BME5), RL34_ICTPU  (Q90YT5), 
RL34_METJA  (P54053), RL34_METKA  (Q8TZB2), RL34_METTH  (O26137), 
RL34_MOUSE  (Q9D1R9), RL34_OCHTR  (Q9NB34), RL34_PEA(P40590), 
RL34_PIG(Q29223), RL34_PYRAB  (Q9UZJ7), RL34_PYRAE  (Q8ZTJ2), 
RL34_PYRCJ  (A3MV68), RL34_PYRFU  (Q8U2L3), RL34_PYRHO  (O74006), 
RL34_PYRIL  (A1RRJ4), RL34_PYRNV  (B1YAJ9), RL34_RABIT  (G1TXG5), 
RL34_RAT(P11250), RL34_SACS2  (Q97ZQ6), RL34_STAMF  (A3DND2), 
RL34_SULAC  (O05981), RL34_SULIA  (C3N5V3), RL34_SULIK  (C4KHI2), 
RL34_SULIL  (C3MQ85), RL34_SULIM  (C3MVX7), RL34_SULIN  (C3NH83), 
RL34_SULIY  (C3NEG9), RL34_SULTO  (Q975K6), RL34_TETTS  (P0DJ23), 
RL34_THEGJ  (C5A259), RL34_THEKO  (Q5JJF7), RL34_THEON  (B6YSP0), 
RL34_THEPD  (A1RXV1), RL34_THESM  (C6A186), RL34_TOBAC  (P41098)
» more

UniProtKB/Swiss-Prot
False negative sequences		 9 sequences 

RL34_DICDI  (Q54LV8), RL34_META3  (A6UW33), RL34_METM5  (A4FYK0), 

RL34_METM6  (A9A697), RL34_METM7  (A6VJT2), RL34_METMP  (Q6LZK0), 
RL34_METS3  (A5UL62), RL34_METST  (Q2NFY3), RL34_METVS  (A6USC2)
» more

UniProtKB/Swiss-Prot
False positive sequences		 1 sequence 

CHO2_PARBA  (C1GZK1)


				
	

	

		PDB
[Detailed view]		
		
			374 PDB
			


			3J6X; 3J6Y; 3J77; 3J78; 3J7O; 3J7P; 3J7Q; 3J7R; 3JAG; 3JAH; 3JAI; 3JCT; 
			
				4ADX; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 
				4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4N; 4V6I; 4V6U; 4V6X; 4V7F; 
				4V88; 4V8P; 4V8T; 4V8Y; 4V8Z; 4V91; 5AJ0; 5APN; 5APO; 5DAT; 5DC3; 5DGE; 
				5DGF; 5DGV; 5FCI; 5FCJ; 5GAK; 5H4P; 5I4L; 5JCS; 5JUO; 5JUP; 5JUS; 5JUT; 
				5JUU; 5LKS; 5LYB; 5LZS; 5LZT; 5LZU; 5LZV; 5LZW; 5M1J; 5MC6; 5MEI; 5NDG; 
				5NDV; 5NDW; 5OBM; 5ON6; 5T2C; 5T62; 5T6R; 5TBW; 5TGA; 5TGM; 6CB1; 6D90; 
				6D9J; 6ELZ; 6EM5; 6FT6; 6FTG; 6FTI; 6FTJ; 6GQ1; 6GQB; 6GQV; 6HD7; 6HHQ; 
				6I7O; 6IP5; 6IP6; 6IP8; 6LQM; 6LSR; 6LSS; 6LU8; 6M62; 6MTD; 6MTE; 6N8J; 
				6N8K; 6N8L; 6N8M; 6N8N; 6N8O; 6OIG; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 
				6OM7; 6P5I; 6P5J; 6P5K; 6P5N; 6Q8Y; 6QIK; 6QT0; 6QTZ; 6QZP; 6R5Q; 6R6G; 
				6R6P; 6R7Q; 6R84; 6R86; 6R87; 6RI5; 6RZZ; 6S05; 6S47; 6SGC; 6SKF; 6SKG; 
				6SNT; 6SV4; 6SWA; 6T4Q; 6T59; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6W6L; 
				6WOO; 6XA1; 6XIQ; 6XIR; 6Y0G; 6Y2L; 6Y57; 6Y6X; 6YLG; 6YLH; 6YLX; 6YLY; 
				6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZVK; 7A01; 7AZY; 
				7B7D; 7BHP; 7BT6; 7BTB; 7CPU; 7CPV; 7F5S; 7LS1; 7LS2; 7MDZ; 7MPI; 7MPJ; 
				7N8B; 7NAC; 7NAD; 7NFX; 7NRC; 7NRD; 7NWG; 7NWH; 7NWI; 7O7Y; 7O7Z; 7O80; 
				7O81; 7OBR; 7OF1; 7OH3; 7OHQ; 7OHR; 7OW7; 7OYA; 7OYB; 7OYD; 7PZY; 7Q08; 
				7Q0F; 7Q0P; 7Q0R; 7QEP; 7QWQ; 7QWR; 7QWS; 7R6K; 7R72; 7R7A; 7TM3; 7TOO; 
				7TOP; 7TOQ; 7TOR; 7TUT; 7U0H; 7UCJ; 7UCK; 7UG6; 7UOO; 7UQB; 7UQZ; 7V08; 
				7XNX; 7XNY; 7Z34; 7ZJW; 7ZJX; 7ZPQ; 7ZRS; 7ZS5; 7ZUW; 7ZUX; 7ZW0; 8A3D; 
				8AAF; 8AGT; 8AGU; 8AGV; 8AGW; 8AGX; 8AGZ; 8AZW; 8B2L; 8B5L; 8B6C; 8BHF; 
				8BIP; 8BJQ; 8BN3; 8BPO; 8BQD; 8BQX; 8BTK; 8CCS; 8CDL; 8CDR; 8CEH; 8CF5; 
				8CG8; 8CGN; 8CIV; 8CKU; 8CMJ; 8ESQ; 8ESR; 8ETC; 8ETG; 8EUB; 8EUG; 8EUI; 
				8EVP; 8EVQ; 8EVR; 8EVS; 8EVT; 8EWB; 8EWC; 8FKY; 8FKZ; 8FL2; 8FL3; 8FL4; 
				8FL6; 8FL7; 8FL9; 8FLA; 8FLB; 8FLC; 8FLD; 8FLE; 8FLF; 8G5Y; 8G5Z; 8G60; 
				8G61; 8G6J; 8GLP; 8HFR; 8HKU; 8HKV; 8HKY; 8HKZ; 8HL1; 8HL2; 8HL3; 8HL4; 
				8HL5; 8IDT; 8IDY; 8IE3; 8IFD; 8IFE; 8INE; 8INF; 8INK; 8IPD; 8IPX; 8IPY; 
				8IR1; 8IR3; 8JDJ; 8JDK; 8JDL; 8JDM; 8K2C; 8K2D; 8K82; 8OHD; 8OJ5; 8OJ8; 
				8P2K; 8P8M; 8P8N; 8P8U; 8PFR; 8QFD; 8QOI; 8RJB; 8RJC; 8RJD; 8SCB; 8V87; 
				8XSX; 8XSY; 8XSZ; 8Y0U; 8Y0W; 8Y0X; 8YOO; 8YOP; 9BDL; 9BDN; 9BDP; 9F1B; 
				9F1C; 9F1D
			
			

			» more