PROSITE logo

PROSITE entry PS01145


View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] RIBOSOMAL_L34E
Accession [info] PS01145
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2001 DATA UPDATE;
03-MAY-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00882

Name and characterization of the entry

Description [info] Ribosomal protein L34e signature.
Pattern [info] 
[ST]-x-S-x-[KRQ]-x(4)-[KR]-[TL]-P-[GS]-[GN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_02 which contains 569'516 sequence entries.


Total number of hits 48 in 48 different sequences
Number of true positive hits 47 in 47 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 9
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.92 %
Recall (true positives / (true positives + false negatives)) 83.93 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 47 sequences 

RL341_ARATH (Q42351    ), RL342_ARATH (Q9FE65    ), RL343_ARATH (Q9LJW6    ), 

RL34A_SCHPO (O42846    ), RL34A_YEAST (P87262    ), RL34B_CANAL (A0A1D8PDZ1), 
RL34B_SCHPO (Q9URT8    ), RL34B_YEAST (P40525    ), RL34_AEDAL  (P45842    ), 
RL34_AERPE  (P58026    ), RL34_DANRE  (Q7ZWJ7    ), RL34_ENCCU  (Q8SSA2    ), 
RL34_HUMAN  (P49207    ), RL34_HYPBU  (A2BME5    ), RL34_ICTPU  (Q90YT5    ), 
RL34_METJA  (P54053    ), RL34_METKA  (Q8TZB2    ), RL34_METTH  (O26137    ), 
RL34_MOUSE  (Q9D1R9    ), RL34_OCHTR  (Q9NB34    ), RL34_PEA    (P40590    ), 
RL34_PIG    (Q29223    ), RL34_PYRAB  (Q9UZJ7    ), RL34_PYRAE  (Q8ZTJ2    ), 
RL34_PYRCJ  (A3MV68    ), RL34_PYRFU  (Q8U2L3    ), RL34_PYRHO  (O74006    ), 
RL34_PYRIL  (A1RRJ4    ), RL34_PYRNV  (B1YAJ9    ), RL34_RAT    (P11250    ), 
RL34_SACS2  (Q97ZQ6    ), RL34_STAMF  (A3DND2    ), RL34_SULAC  (O05981    ), 
RL34_SULIA  (C3N5V3    ), RL34_SULIK  (C4KHI2    ), RL34_SULIL  (C3MQ85    ), 
RL34_SULIM  (C3MVX7    ), RL34_SULIN  (C3NH83    ), RL34_SULIY  (C3NEG9    ), 
RL34_SULTO  (Q975K6    ), RL34_TETTS  (P0DJ23    ), RL34_THEGJ  (C5A259    ), 
RL34_THEKO  (Q5JJF7    ), RL34_THEON  (B6YSP0    ), RL34_THEPD  (A1RXV1    ), 
RL34_THESM  (C6A186    ), RL34_TOBAC  (P41098    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 9 sequences 

RL34_DICDI  (Q54LV8    ), RL34_META3  (A6UW33    ), RL34_METM5  (A4FYK0    ), 

RL34_METM6  (A9A697    ), RL34_METM7  (A6VJT2    ), RL34_METMP  (Q6LZK0    ), 
RL34_METS3  (A5UL62    ), RL34_METST  (Q2NFY3    ), RL34_METVS  (A6USC2    )
» more

UniProtKB/Swiss-Prot
False positive sequences		 1 sequence 

CHO2_PARBA  (C1GZK1    )


				
	

	

		PDB
[Detailed view]		
		
			191 PDB
			


			3J6X; 3J6Y; 3J77; 3J78; 3J7O; 3J7P; 3J7Q; 3J7R; 3JCT; 4ADX; 4U3M; 4U3N; 
			
				4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 
				4U55; 4U56; 4U6F; 4UG0; 4V4N; 4V6I; 4V6U; 4V6X; 4V7F; 4V88; 4V8P; 4V8T; 
				4V8Y; 4V8Z; 4V91; 5AJ0; 5APN; 5APO; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 
				5FCJ; 5GAK; 5H4P; 5I4L; 5JCS; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LYB; 
				5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OBM; 5ON6; 5T2C; 5T62; 5T6R; 5TBW; 
				5TGA; 5TGM; 6CB1; 6ELZ; 6EM5; 6FT6; 6GQ1; 6GQB; 6GQV; 6HD7; 6HHQ; 6I7O; 
				6IP5; 6IP6; 6IP8; 6LQM; 6LSR; 6LSS; 6LU8; 6M62; 6MTD; 6MTE; 6N8J; 6N8K; 
				6N8L; 6N8M; 6N8N; 6N8O; 6OIG; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 
				6Q8Y; 6QIK; 6QT0; 6QTZ; 6QZP; 6R84; 6R86; 6R87; 6RI5; 6RZZ; 6S05; 6S47; 
				6SKF; 6SKG; 6SNT; 6SV4; 6SWA; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 
				6W6L; 6WOO; 6XA1; 6XIQ; 6XIR; 6Y0G; 6Y2L; 6Y57; 6Y6X; 6YLG; 6YLH; 6YLX; 
				6YLY; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZM7; 6ZME; 6ZMI; 6ZMO; 7AZY; 7B7D; 
				7BHP; 7BT6; 7BTB; 7CPU; 7CPV; 7F5S; 7LS1; 7LS2; 7MPI; 7MPJ; 7N8B; 7NAC; 
				7NAD; 7NRC; 7NRD; 7OF1; 7OH3; 7OHQ; 7OHR; 7OW7; 7OYA; 7OYB; 7PZY; 7Q08; 
				7Q0F; 7Q0P; 7Q0R; 7QEP; 7R6K; 7R72; 7R7A; 7TOO; 7TOP; 7Z34; 7ZW0
			
			

			» more