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Entry: PS01145

General information about the entry

Entry name [info] RIBOSOMAL_L34E
Accession [info] PS01145
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2001 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00882

Name and characterization of the entry

Description [info] Ribosomal protein L34e signature.
Pattern [info]
[ST]-x-S-x-[KRQ]-x(4)-[KR]-[TL]-P-[GS]-[GN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 47 in 47 different sequences
Number of true positive hits 46 in 46 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 9
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.87 %
Recall (true positives / (true positives + false negatives)) 83.64 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
46 sequences

RL341_ARATH (Q42351    ), RL342_ARATH (Q9FE65    ), RL343_ARATH (Q9LJW6    ), 
RL34A_SCHPO (O42846    ), RL34A_YEAST (P87262    ), RL34B_SCHPO (Q9URT8    ), 
RL34B_YEAST (P40525    ), RL34_AEDAL  (P45842    ), RL34_AERPE  (P58026    ), 
RL34_DANRE  (Q7ZWJ7    ), RL34_ENCCU  (Q8SSA2    ), RL34_HUMAN  (P49207    ), 
RL34_HYPBU  (A2BME5    ), RL34_ICTPU  (Q90YT5    ), RL34_METJA  (P54053    ), 
RL34_METKA  (Q8TZB2    ), RL34_METTH  (O26137    ), RL34_MOUSE  (Q9D1R9    ), 
RL34_OCHTR  (Q9NB34    ), RL34_PEA    (P40590    ), RL34_PIG    (Q29223    ), 
RL34_PYRAB  (Q9UZJ7    ), RL34_PYRAE  (Q8ZTJ2    ), RL34_PYRCJ  (A3MV68    ), 
RL34_PYRFU  (Q8U2L3    ), RL34_PYRHO  (O74006    ), RL34_PYRIL  (A1RRJ4    ), 
RL34_PYRNV  (B1YAJ9    ), RL34_RAT    (P11250    ), RL34_SACS2  (Q97ZQ6    ), 
RL34_STAMF  (A3DND2    ), RL34_SULAC  (O05981    ), RL34_SULIA  (C3N5V3    ), 
RL34_SULIK  (C4KHI2    ), RL34_SULIL  (C3MQ85    ), RL34_SULIM  (C3MVX7    ), 
RL34_SULIN  (C3NH83    ), RL34_SULIY  (C3NEG9    ), RL34_SULTO  (Q975K6    ), 
RL34_TETTS  (P0DJ23    ), RL34_THEGJ  (C5A259    ), RL34_THEKO  (Q5JJF7    ), 
RL34_THEON  (B6YSP0    ), RL34_THEPD  (A1RXV1    ), RL34_THESM  (C6A186    ), 
RL34_TOBAC  (P41098    )
» more

UniProtKB/Swiss-Prot
False negative sequences
9 sequences

RL34_DICDI  (Q54LV8    ), RL34_META3  (A6UW33    ), RL34_METM5  (A4FYK0    ), 
RL34_METM6  (A9A697    ), RL34_METM7  (A6VJT2    ), RL34_METMP  (Q6LZK0    ), 
RL34_METS3  (A5UL62    ), RL34_METST  (Q2NFY3    ), RL34_METVS  (A6USC2    )
» more

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

CHO2_PARBA  (C1GZK1    )

		
PDB
[Detailed view]
122 PDB

3J6X; 3J6Y; 3J77; 3J78; 3J7O; 3J7P; 3J7Q; 3J7R; 3JCT; 4ADX; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4N; 4V6I; 4V6U; 4V6X; 4V7F; 4V88; 4V8P; 4V8T; 4V8Y; 4V8Z; 4V91; 5AJ0; 5APN; 5APO; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FL8; 5GAK; 5H4P; 5I4L; 5JCS; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OBM; 5ON6; 5T2C; 5T62; 5T6R; 5TBW; 5TGA; 5TGM; 6CB1; 6EK0; 6ELZ; 6EM5; 6FT6; 6GQ1; 6GQB; 6GQV; 6HD7; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6N8J; 6N8K; 6N8L; 6N8M; 6N8N; 6N8O; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QIK; 6QT0; 6QTZ; 6QZP; 6R84; 6R86; 6R87; 6RI5; 6RZZ; 6S05; 6S47; 6SNT; 6SV4; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TNU
» more

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