PROSITE entry PS01149

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General information about the entry

Entry name [info]	PSI_RSU
Accession [info]	PS01149
Entry type [info]	PATTERN
Date [info]	01-NOV-1995 CREATED; 01-JUL-1999 DATA UPDATE; 03-MAY-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00885

Name and characterization of the entry

Description [info]	Rsu family of pseudouridine synthase signature.
Pattern [info]	G-R-L-D-x(2)-[STA]-x-G-[LIVFA]-[LIVMF](3)-[ST]-[DNST].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_02 which contains 569'516 sequence entries.

Total number of hits	73 in 73 different sequences
Number of true positive hits	73 in 73 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	0
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	100.00 %

Comments [info]

Taxonomic range [info]	Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

73 sequences

RLUB_BACSU  (P35159    ), RLUB_BUCAI  (P57369    ), RLUB_BUCAP  (P42395    ),

RLUB_BUCBP  (Q89AL1    ), RLUB_ECO57  (Q8X4Q8    ), RLUB_ECOL6  (Q8FHV4    ), 
RLUB_ECOLI  (P37765    ), RLUB_HAEIN  (P45104    ), RLUB_PASMU  (Q9CMY9    ), 
RLUB_PSEAE  (Q9HZ55    ), RLUB_SALTI  (Q8Z7D5    ), RLUB_SALTY  (Q8ZP51    ), 
RLUB_SHIFL  (P59815    ), RLUB_VIBCH  (Q9KSS7    ), RLUB_VIBPA  (Q87NB7    ), 
RLUB_VIBVU  (Q8D8C0    ), RLUB_XANAC  (Q8PK58    ), RLUB_XANCP  (Q8P8M6    ), 
RLUB_XYLFA  (Q9PAP2    ), RLUB_XYLFT  (Q87BI2    ), RLUB_YERPE  (Q8ZEG0    ), 
RLUE_ECO57  (Q8X724    ), RLUE_ECOL6  (Q8FIB6    ), RLUE_ECOLI  (P75966    ), 
RLUE_HAEIN  (P44827    ), RLUE_PASMU  (Q9CKK7    ), RLUE_PSEAE  (Q9HX48    ), 
RLUE_SALTI  (Q8Z7G6    ), RLUE_SALTY  (Q8ZPZ1    ), RLUE_SHIFL  (Q83LF6    ), 
RLUE_VIBCH  (Q9F855    ), RLUE_VIBPA  (Q87QY8    ), RLUE_VIBVU  (Q8DAS3    ), 
RLUE_XANAC  (Q8PQN3    ), RLUE_XANCP  (Q8PDR2    ), RLUE_YERPE  (Q8ZFQ3    ), 
RLUF_ECO57  (Q8X4L9    ), RLUF_ECOL6  (Q8FB47    ), RLUF_ECOLI  (P32684    ), 
RLUF_SALTI  (Q8Z1V3    ), RLUF_SALTY  (Q8ZKL1    ), RLUF_SHIFL  (Q83IR6    ), 
RSUA_ECO57  (P0AA45    ), RSUA_ECOL6  (P0AA44    ), RSUA_ECOLI  (P0AA43    ), 
RSUA_HAEIN  (P45124    ), RSUA_PASMU  (Q9CPN4    ), RSUA_PSEAE  (Q9I5J6    ), 
RSUA_SALTI  (P65841    ), RSUA_SALTY  (P65840    ), RSUA_SHIFL  (P0AA46    ), 
RSUA_VIBCH  (Q9KRK5    ), RSUA_VIBPA  (Q87QD4    ), RSUA_VIBVU  (Q8D8X2    ), 
RSUA_YERPE  (Q8ZGM2    ), SVR1_ARATH  (Q8L960    ), Y129_BORBU  (O51155    ), 
Y1370_MYCLE (O05668    ), Y1459_HELPY (P55986    ), Y1464_AQUAE (O67444    ), 
Y1711_MYCTO (P9WHQ0    ), Y1711_MYCTU (P9WHQ1    ), Y1738_MYCBO (P65843    ), 
Y321_RICBR  (Q1RJR2    ), Y361_SYNY3  (Q55578    ), Y532_RICTY  (Q68WJ1    ), 
Y544_RICFE  (Q4UL59    ), Y544_RICPR  (Q9ZD06    ), Y554_AQUAE  (O66829    ), 
Y612_SYNY3  (P72581    ), Y807_RICCN  (Q92HG4    ), YE59_HELPJ  (Q9ZJG0    ), 
YTZG_BACSU  (O32068    )

» more

Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

PDB
[Detailed view]

10 PDB

1KSK; 1KSL; 1KSV; 1VIO; 2GML; 2OLW; 2OML; 3DH3; 4LAB; 4LGT