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PROSITE entry PS01151


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS01151
Entry name [info] FIMBRIAL_USHER
Accession [info] PS01151
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-NOV-1995 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00886

Name and characterization of the entry

Description [info] Fimbrial biogenesis outer membrane usher protein signature.
Pattern [info] 
[VL]-[PASQ]-[PAS]-G-[PAD]-[FY]-x-[LI]-[DNQSTAP]-[DNH]-[LIVMFY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 33 in 33 different sequences
Number of true positive hits 33 in 33 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 91.67 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 33 sequences 

AFAC_ECOLX  (P53517), AGGC_ECOLX  (P46005), CAF1A_YERPE (P26949), 

CS32_ECOLX  (P15484), ELFC_ECO57  (Q8XDD1), ELFC_ECOLI  (P75857), 
FAED_ECOLX  (P06970), FAND_ECOLX  (P12050), FASD_ECOLX  (P46000), 
FIMC_BORPE  (P33410), FIMD_ECOLI  (P30130), FIMD_SALTY  (P37924), 
FOCD_ECOLX  (P46009), HIFC1_HAEIF (P33397), HIFC2_HAEIF (P45997), 
HIFC3_HAEIF (P45998), HTRE_ECOLI  (P33129), LPFC_ECO57  (Q8X5K7), 
LPFC_SALTY  (P43662), MRKC_KLEPN  (P21647), MYFC_YEREN  (P33408), 
PAPC_ECOLX  (P07110), PEFC_SALTY  (P37868), PMFC_PROMH  (P53514), 
PSAC_YERPE  (P31527), PSAC_YERPS  (Q56983), SFMD_ECOLI  (P77468), 
YBGQ_ECOLI  (P75750), YEHB_ECOLI  (P33341), YFCU_ECOLI  (P77196), 
YHCD_ECOLI  (P45420), YQIG_ECOLI  (P76655), YRAJ_ECOLI  (P42915)
» more

UniProtKB/Swiss-Prot
False negative sequences		 3 sequences 

CSSD1_ECOLX (P53512), CSSD2_ECOLX (P53513), SEFC_SALEN  (P33388)


				
	

	

		PDB
[Detailed view]		
		
			13 PDB
			


			2VQI; 3FCG; 3FIP; 3OHN; 3RFZ; 4J3O; 6CD2; 6E14; 6E15; 7LHG; 7LHH; 7LHI; 
			
				9BOG
			
			

			» more