PROSITE entry PS01151
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General information about the entry
Entry name [info] | FIMBRIAL_USHER |
Accession [info] | PS01151 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1995 CREATED;
01-NOV-1995 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00886 |
Name and characterization of the entry
Description [info] | Fimbrial biogenesis outer membrane usher protein signature. |
Pattern [info] |
[VL]-[PASQ]-[PAS]-G-[PAD]-[FY]-x-[LI]-[DNQSTAP]-[DNH]-[LIVMFY]. |
Numerical results [info]
Total number of hits | 33 in 33 different sequences |
Number of true positive hits | 33 in 33 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 3 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 91.67 % |
Comments [info]
Taxonomic range [info] | Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
33 sequences
AFAC_ECOLX (P53517), AGGC_ECOLX (P46005), CAF1A_YERPE (P26949), CS32_ECOLX (P15484), ELFC_ECO57 (Q8XDD1), ELFC_ECOLI (P75857), FAED_ECOLX (P06970), FAND_ECOLX (P12050), FASD_ECOLX (P46000), FIMC_BORPE (P33410), FIMD_ECOLI (P30130), FIMD_SALTY (P37924), FOCD_ECOLX (P46009), HIFC1_HAEIF (P33397), HIFC2_HAEIF (P45997), HIFC3_HAEIF (P45998), HTRE_ECOLI (P33129), LPFC_ECO57 (Q8X5K7), LPFC_SALTY (P43662), MRKC_KLEPN (P21647), MYFC_YEREN (P33408), PAPC_ECOLX (P07110), PEFC_SALTY (P37868), PMFC_PROMH (P53514), PSAC_YERPE (P31527), PSAC_YERPS (Q56983), SFMD_ECOLI (P77468), YBGQ_ECOLI (P75750), YEHB_ECOLI (P33341), YFCU_ECOLI (P77196), YHCD_ECOLI (P45420), YQIG_ECOLI (P76655), YRAJ_ECOLI (P42915)» more
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UniProtKB/Swiss-Prot False negative sequences |
3 sequences
CSSD1_ECOLX (P53512), CSSD2_ECOLX (P53513), SEFC_SALEN (P33388) |
PDB [Detailed view] |
12 PDB
2VQI; 3FCG; 3FIP; 3OHN; 3RFZ; 4J3O; 6CD2; 6E14; 6E15; 7LHG; 7LHH; 7LHI |