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PROSITE entry PS01155


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General information about the entry

Entry name [info] ENDONUCLEASE_III_2
Accession [info] PS01155
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00615

Name and characterization of the entry

Description [info] Endonuclease III family signature.
Pattern [info]
[GSTENA]-x-[LIVMF]-P-x(5)-[LIVMW]-x(2,3)-[LI]-[PAS]-G-[IV]-[GA]-x(3)-
[GAC]-x(2,3)-[LIVMA]-x(1,2)-[GSALVI]-[LIVMFYW]-[GANKD].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 43 in 43 different sequences
Number of true positive hits 42 in 42 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 7
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 97.67 %
Recall (true positives / (true positives + false negatives)) 85.71 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
42 sequences

END3_BACSU  (P39788), END3_BUCAI  (P57219), END3_BUCAP  (Q8KA16), 
END3_BUCBP  (Q89AW4), END3_ECOL6  (P0AB84), END3_ECOLI  (P0AB83), 
END3_HAEIN  (P44319), END3_METJA  (Q58030), END3_MYCBO  (P63541), 
END3_MYCLE  (Q9CB92), END3_MYCTO  (P9WQ10), END3_MYCTU  (P9WQ11), 
END3_RICCN  (Q92GH4), END3_RICFE  (Q4UK93), END3_RICPR  (O05956), 
END3_RICTY  (Q68W04), END3_SYNY3  (P73715), END3_THEMA  (Q9WYK0), 
END3_TREPA  (O83754), MIG_METTF   (P29588), MUTYH_HUMAN (Q9UIF7), 
MUTYH_MOUSE (Q99P21), MUTYH_RAT   (Q8R5G2), MUTY_BUCAI  (P57617), 
MUTY_BUCAP  (Q8K926), MUTY_BUCBP  (Q89A45), MUTY_ECOLI  (P17802), 
MUTY_HAEIN  (P44320), MUTY_SALTY  (Q05869), MYH1_SCHPO  (Q10159), 
NTH1_ARATH  (Q9SIC4), NTH1_YEAST  (P31378), NTH2_ARATH  (B9DFZ0), 
NTH2_YEAST  (Q08214), NTH_BOVIN   (Q2KID2), NTH_CAEEL   (P54137), 
NTH_CHICK   (A7M7B9), NTH_EMENI   (C8VC05), NTH_HUMAN   (P78549), 
NTH_MOUSE   (O35980), NTH_SCHPO   (Q09907), UVEN_MICLC  (P46303)
» more

UniProtKB/Swiss-Prot
False negative sequences
7 sequences

MIG_AERPE   (Q9YDP0), MIG_PYRAE   (Q7LX22), MUTYH_ARATH (F4JRF4), 
MUTY_BACSU  (O31584), MUTY_GEOSE  (P83847), NTH_ENCCU   (Q8SRB8), 
Y1434_METJA (Q58829)
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

MUTY_AERHY  (P46230)

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

ELN_HUMAN   (P15502)

		
PDB
[Detailed view]
20 PDB

1KEA; 1KG2; 1KG3; 1KG4; 1KG5; 1KG6; 1KG7; 1KQJ; 1MUD; 1MUN; 1MUY; 1WEF; 1WEG; 1WEI; 2ABK; 3N5N; 7EF8; 7EF9; 7RDS; 7RDT
» more