PROSITE entry PS01155
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General information about the entry
Entry name [info] | ENDONUCLEASE_III_2 |
Accession [info] | PS01155 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00615 |
Name and characterization of the entry
Description [info] | Endonuclease III family signature. |
Pattern [info] |
[GSTENA]-x-[LIVMF]-P-x(5)-[LIVMW]-x(2,3)-[LI]-[PAS]-G-[IV]-[GA]-x(3)- [GAC]-x(2,3)-[LIVMA]-x(1,2)-[GSALVI]-[LIVMFYW]-[GANKD]. |
Numerical results [info]
Total number of hits | 43 in 43 different sequences |
Number of true positive hits | 42 in 42 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 1 |
Number of false negative sequences | 7 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 97.67 % |
Recall (true positives / (true positives + false negatives)) | 85.71 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
42 sequences
END3_BACSU (P39788), END3_BUCAI (P57219), END3_BUCAP (Q8KA16), END3_BUCBP (Q89AW4), END3_ECOL6 (P0AB84), END3_ECOLI (P0AB83), END3_HAEIN (P44319), END3_METJA (Q58030), END3_MYCBO (P63541), END3_MYCLE (Q9CB92), END3_MYCTO (P9WQ10), END3_MYCTU (P9WQ11), END3_RICCN (Q92GH4), END3_RICFE (Q4UK93), END3_RICPR (O05956), END3_RICTY (Q68W04), END3_SYNY3 (P73715), END3_THEMA (Q9WYK0), END3_TREPA (O83754), MIG_METTF (P29588), MUTYH_HUMAN (Q9UIF7), MUTYH_MOUSE (Q99P21), MUTYH_RAT (Q8R5G2), MUTY_BUCAI (P57617), MUTY_BUCAP (Q8K926), MUTY_BUCBP (Q89A45), MUTY_ECOLI (P17802), MUTY_HAEIN (P44320), MUTY_SALTY (Q05869), MYH1_SCHPO (Q10159), NTH1_ARATH (Q9SIC4), NTH1_YEAST (P31378), NTH2_ARATH (B9DFZ0), NTH2_YEAST (Q08214), NTH_BOVIN (Q2KID2), NTH_CAEEL (P54137), NTH_CHICK (A7M7B9), NTH_EMENI (C8VC05), NTH_HUMAN (P78549), NTH_MOUSE (O35980), NTH_SCHPO (Q09907), UVEN_MICLC (P46303)» more
|
UniProtKB/Swiss-Prot False negative sequences |
7 sequences
MIG_AERPE (Q9YDP0), MIG_PYRAE (Q7LX22), MUTYH_ARATH (F4JRF4), MUTY_BACSU (O31584), MUTY_GEOSE (P83847), NTH_ENCCU (Q8SRB8), Y1434_METJA (Q58829)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
MUTY_AERHY (P46230) |
UniProtKB/Swiss-Prot False positive sequences |
1 sequence
ELN_HUMAN (P15502) |
PDB [Detailed view] |
20 PDB
1KEA; 1KG2; 1KG3; 1KG4; 1KG5; 1KG6; 1KG7; 1KQJ; 1MUD; 1MUN; 1MUY; 1WEF; 1WEG; 1WEI; 2ABK; 3N5N; 7EF8; 7EF9; 7RDS; 7RDT » more |