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Entry: PS01161

General information about the entry

Entry name [info] GLC_GALNAC_ISOMERASE
Accession [info] PS01161
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE;
11-DEC-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00894

Name and characterization of the entry

Description [info] Glucosamine/galactosamine-6-phosphate isomerases signature.
Pattern [info]
[LIVM]-x(3)-[GNH]-x(0,1)-[LITCRV]-x-[LIVWF]-x-[LIVMF]-x-[GS]-[LIVM]-G-x-
[DENV]-G-[HN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_11 which contains 561'568 sequence entries.


Total number of hits 276 in 276 different sequences
Number of true positive hits 276 in 276 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 12
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.83 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
276 sequences

AGAI_ECOLI  (P42912    ), GAMA_BACSU  (O31458    ), GNPI1_BOVIN (A4FV08    ), 
GNPI1_GIAIN (O97439    ), GNPI1_HUMAN (P46926    ), GNPI1_MESAU (Q64422    ), 
GNPI1_MOUSE (O88958    ), GNPI1_PONAB (Q5R8T8    ), GNPI2_BOVIN (Q17QL1    ), 
GNPI2_GIAIN (O97440    ), GNPI2_HUMAN (Q8TDQ7    ), GNPI2_MOUSE (Q9CRC9    ), 
GNPI2_XENLA (Q6PA43    ), GNPI2_XENTR (A4IHW6    ), GNPI_AEDAE  (Q16HW7    ), 
GNPI_ANOGA  (Q5TNH5    ), GNPI_CAEEL  (Q9XVJ2    ), GNPI_DICDI  (Q54XK9    ), 
GNPI_DROME  (Q9VMP9    ), GNPI_DROPS  (Q29NT9    ), NAG1_CANAL  (Q04802    ), 
NAGB_ACTP2  (A3N353    ), NAGB_ACTP7  (B3GZ06    ), NAGB_ACTPJ  (B0BSS6    ), 
NAGB_AERHH  (A0KIG3    ), NAGB_AERS4  (A4SPM2    ), NAGB_ALIF1  (Q5E294    ), 
NAGB_ALIFM  (B5FBU7    ), NAGB_ALISL  (B6EN78    ), NAGB_ALKMQ  (A6TVP5    ), 
NAGB_ALKOO  (A8MIX7    ), NAGB_ARTS2  (A0JY49    ), NAGB_BACAA  (C3P761    ), 
NAGB_BACAC  (C3LIR9    ), NAGB_BACAH  (A0RI59    ), NAGB_BACAN  (Q81MH5    ), 
NAGB_BACC0  (B7JL33    ), NAGB_BACC1  (Q731P4    ), NAGB_BACC2  (B7IWG6    ), 
NAGB_BACC3  (C1EQS8    ), NAGB_BACC4  (B7H945    ), NAGB_BACC7  (B7HN32    ), 
NAGB_BACCN  (A7GS78    ), NAGB_BACCQ  (B9IWR7    ), NAGB_BACCR  (Q819D1    ), 
NAGB_BACCZ  (Q635M6    ), NAGB_BACFN  (Q5LGU0    ), NAGB_BACFR  (Q64XP2    ), 
NAGB_BACHD  (Q9KFQ8    ), NAGB_BACHK  (Q6HEB2    ), NAGB_BACMK  (A9VFF7    ), 
NAGB_BACP2  (A8FHS6    ), NAGB_BACSK  (Q5WHY0    ), NAGB_BACSU  (O35000    ), 
NAGB_BACTN  (Q8A094    ), NAGB_BACV8  (A6L7Q8    ), NAGB_BEUC1  (C5BY94    ), 
NAGB_BIFLD  (B3DQQ9    ), NAGB_BIFLO  (Q8G4N5    ), NAGB_BIFLS  (B7GQA1    ), 
NAGB_BLOFL  (Q7VR99    ), NAGB_BORAP  (Q0SP13    ), NAGB_BORBP  (Q662L3    ), 
NAGB_BORBU  (O30564    ), NAGB_BORBZ  (B7J183    ), NAGB_BORHD  (B2RZL5    ), 
NAGB_BREBN  (C0ZJF8    ), NAGB_CALS4  (Q8R5T0    ), NAGB_CELJU  (B3PBV0    ), 
NAGB_CITK8  (A8AJE0    ), NAGB_CLOAB  (Q97MK9    ), NAGB_CLOB1  (A7FX73    ), 
NAGB_CLOB6  (C3L2N7    ), NAGB_CLOB8  (A6M241    ), NAGB_CLOBH  (A5I5R9    ), 
NAGB_CLOBJ  (C1FV12    ), NAGB_CLOBK  (B1IKY4    ), NAGB_CLOBL  (A7GH51    ), 
NAGB_CLOBM  (B1KZ07    ), NAGB_CLONN  (A0PYW1    ), NAGB_CLOP1  (Q0TML8    ), 
NAGB_CLOPE  (Q8XHP8    ), NAGB_CLOPS  (Q0SQB4    ), NAGB_CLOTE  (Q890L6    ), 
NAGB_COLP3  (Q487K8    ), NAGB_CORA7  (C3PJW6    ), NAGB_CORDI  (Q6NJ91    ), 
NAGB_COREF  (Q8FMI6    ), NAGB_CORK4  (C4LL80    ), NAGB_CORU7  (B1VI88    ), 
NAGB_CROS8  (A7MQT6    ), NAGB_DESAD  (C6C0A2    ), NAGB_ECO24  (A7ZJ60    ), 
NAGB_ECO27  (B7UKV0    ), NAGB_ECO45  (B7MFT4    ), NAGB_ECO55  (B7L9L4    ), 
NAGB_ECO57  (P0A760    ), NAGB_ECO5E  (B5YQM0    ), NAGB_ECO7I  (B7NMM9    ), 
NAGB_ECO81  (B7MPI3    ), NAGB_ECO8A  (B7M5J6    ), NAGB_ECOBW  (C4ZWF4    ), 
NAGB_ECODH  (B1X6L1    ), NAGB_ECOHS  (A7ZXT7    ), NAGB_ECOK1  (A1A8T7    ), 
NAGB_ECOL5  (Q0TK13    ), NAGB_ECOL6  (Q8FJX7    ), NAGB_ECOLC  (B1IY50    ), 
NAGB_ECOLI  (P0A759    ), NAGB_ECOLU  (B7N9S4    ), NAGB_ECOSE  (B6HYN6    ), 
NAGB_ECOSM  (B1LLC0    ), NAGB_ECOUT  (Q1REP9    ), NAGB_EDWI9  (C5BGA6    ), 
NAGB_ENT38  (A4W844    ), NAGB_ENTFA  (P59687    ), NAGB_ERWT9  (B2VBN5    ), 
NAGB_ESCF3  (B7LKT5    ), NAGB_EXIS2  (B1YJ30    ), NAGB_EXISA  (C4L2C5    ), 
NAGB_FUSNN  (Q8REG1    ), NAGB_GEOSW  (C5D3L0    ), NAGB_HAEDU  (Q7VKN1    ), 
NAGB_HAEI8  (Q4QP46    ), NAGB_HAEIE  (A5UB10    ), NAGB_HAEIN  (P44538    ), 
NAGB_HAEPS  (B8F877    ), NAGB_HAES1  (Q0I4B9    ), NAGB_HAHCH  (Q2S6X5    ), 
NAGB_HALOH  (B8D185    ), NAGB_HISS2  (B0UUN2    ), NAGB_KLEP3  (B5XZG9    ), 
NAGB_KLEP7  (A6T6C1    ), NAGB_LACAC  (Q5FHT1    ), NAGB_LACDA  (Q1G817    ), 
NAGB_LACDB  (Q047I3    ), NAGB_LACH4  (A8YTN8    ), NAGB_LACJO  (Q74HC4    ), 
NAGB_LACLA  (Q9CFA8    ), NAGB_LACLM  (A2RJR7    ), NAGB_LACLS  (Q02Y08    ), 
NAGB_LACP3  (Q033M5    ), NAGB_LACP7  (A9KIR8    ), NAGB_LACPL  (Q88ZS6    ), 
NAGB_LACS1  (Q1WS60    ), NAGB_LACSS  (Q38YK9    ), NAGB_LEUCK  (B1MX39    ), 
NAGB_LEUMM  (Q03Z95    ), NAGB_LISIN  (Q92D64    ), NAGB_LISMC  (C1L1M8    ), 
NAGB_LISMF  (Q721K9    ), NAGB_LISMH  (B8DEH8    ), NAGB_LISMO  (Q8Y8E7    ), 
NAGB_LISW6  (A0AH75    ), NAGB_LYSSC  (B1HUU8    ), NAGB_LYSSH  (P59686    ), 
NAGB_MANSM  (Q65QE8    ), NAGB_MARMS  (A6VVU9    ), NAGB_MYCMS  (Q6MSF4    ), 
NAGB_MYCPE  (Q8EWM7    ), NAGB_MYCPU  (Q98QJ9    ), NAGB_MYCS2  (A0QU88    ), 
NAGB_OCEIH  (Q8ESL6    ), NAGB_OENOB  (Q04G36    ), NAGB_PARD8  (A6LHV2    ), 
NAGB_PASMU  (Q9CMF4    ), NAGB_PECAS  (Q6D7J9    ), NAGB_PECCP  (C6DBY4    ), 
NAGB_PEDPA  (Q03H91    ), NAGB_PHOLL  (Q7MB61    ), NAGB_PORG3  (B2RJ01    ), 
NAGB_PORGI  (Q7MW43    ), NAGB_PROMH  (B4ESJ0    ), NAGB_PSECP  (B8HAX3    ), 
NAGB_PSEHT  (Q3ID09    ), NAGB_PSYIN  (A1SS81    ), NAGB_RHOBA  (Q7UVM5    ), 
NAGB_RHOJR  (Q0SGH6    ), NAGB_RHOOB  (C1AW66    ), NAGB_SALA4  (B5EZC1    ), 
NAGB_SALAR  (A9MKA9    ), NAGB_SALCH  (Q57RQ0    ), NAGB_SALDC  (B5FNB9    ), 
NAGB_SALEP  (B5QWC8    ), NAGB_SALG2  (B5R824    ), NAGB_SALHS  (B4TB82    ), 
NAGB_SALNS  (B4SYN7    ), NAGB_SALPA  (Q5PCH6    ), NAGB_SALPB  (A9MUG8    ), 
NAGB_SALPC  (C0PWA5    ), NAGB_SALPK  (B5BCC5    ), NAGB_SALSV  (B4TPZ8    ), 
NAGB_SALTI  (Q8Z8G0    ), NAGB_SALTY  (Q8ZQX7    ), NAGB_SERP5  (A8GB41    ), 
NAGB_SHEHH  (B0TTP5    ), NAGB_SHELP  (A3QB39    ), NAGB_SHESH  (A8FRI2    ), 
NAGB_SHEWM  (B1KFS0    ), NAGB_SHIB3  (B2TU53    ), NAGB_SHIBS  (Q324M6    ), 
NAGB_SHIDS  (Q32IQ2    ), NAGB_SHIF8  (Q0T6S6    ), NAGB_SHIFL  (P59688    ), 
NAGB_SHISS  (Q3Z4C2    ), NAGB_STAA1  (A7WZ06    ), NAGB_STAA2  (A6TZ46    ), 
NAGB_STAA3  (Q2FJ71    ), NAGB_STAA8  (Q2G0K8    ), NAGB_STAA9  (A5IQC3    ), 
NAGB_STAAB  (Q2YS95    ), NAGB_STAAC  (Q5HIA6    ), NAGB_STAAE  (A6QEM2    ), 
NAGB_STAAM  (P65512    ), NAGB_STAAN  (P99125    ), NAGB_STAAR  (Q6GJA0    ), 
NAGB_STAAS  (Q6GBR8    ), NAGB_STAAT  (A8YZR7    ), NAGB_STAAW  (P65513    ), 
NAGB_STAEQ  (Q5HRH8    ), NAGB_STAES  (Q8CTR3    ), NAGB_STAS1  (Q49VB6    ), 
NAGB_STRA1  (Q3K1Q7    ), NAGB_STRA3  (P65514    ), NAGB_STRA5  (P65515    ), 
NAGB_STRAW  (P59689    ), NAGB_STRCO  (Q9K487    ), NAGB_STRE4  (C0M970    ), 
NAGB_STREM  (B4U206    ), NAGB_STRGC  (A8AYK4    ), NAGB_STRP1  (Q99Z50    ), 
NAGB_STRP2  (Q04JT5    ), NAGB_STRP3  (P0DC66    ), NAGB_STRP4  (B5E5S3    ), 
NAGB_STRP6  (Q5XBG4    ), NAGB_STRP7  (C1C814    ), NAGB_STRP8  (Q8P0E0    ), 
NAGB_STRPG  (A2RDX6    ), NAGB_STRPI  (B1ICL5    ), NAGB_STRPJ  (B8ZKX4    ), 
NAGB_STRPN  (Q97Q16    ), NAGB_STRPQ  (P0DC67    ), NAGB_STRPZ  (B5XM45    ), 
NAGB_STRR6  (Q8DPA1    ), NAGB_STRS2  (A4W0A3    ), NAGB_STRS7  (C0MCU1    ), 
NAGB_STRSY  (A4VU11    ), NAGB_STRTD  (Q03LS1    ), NAGB_STRU0  (B9DWG4    ), 
NAGB_STRZJ  (C1CF03    ), NAGB_STRZP  (C1CLC3    ), NAGB_STRZT  (C1CQU2    ), 
NAGB_THEP3  (B0K934    ), NAGB_THEPX  (B0K0J7    ), NAGB_TOLAT  (C4L889    ), 
NAGB_TREDE  (Q73QV6    ), NAGB_VIBC3  (A5F125    ), NAGB_VIBCB  (A7N5W3    ), 
NAGB_VIBCH  (Q9KKS5    ), NAGB_VIBCM  (C3LWT7    ), NAGB_VIBPA  (Q87K60    ), 
NAGB_VIBTL  (B7VTI0    ), NAGB_VIBVU  (Q8D4T9    ), NAGB_VIBVY  (Q7MGE1    ), 
NAGB_YERE8  (A1JQE8    ), NAGB_YERP3  (A7FKU3    ), NAGB_YERPA  (Q1C537    ), 
NAGB_YERPB  (B2K8A2    ), NAGB_YERPE  (Q8ZDE1    ), NAGB_YERPG  (A9R7S4    ), 
NAGB_YERPN  (Q1CKN7    ), NAGB_YERPP  (A4TNY0    ), NAGB_YERPS  (Q66DC7    ), 
NAGB_YERPY  (B1JG88    ), Y258_BACTN  (Q8AB53    ), YIEK_ECOLI  (P31470    )
» more

UniProtKB/Swiss-Prot
False negative sequences
12 sequences

NAGB_ACHLI  (A9NEX8    ), NAGB_BACVZ  (A7Z975    ), NAGB_CLOBA  (B2V163    ), 
NAGB_CLOBB  (B2TL69    ), NAGB_CLOD6  (Q18AL0    ), NAGB_CORGB  (A4QH44    ), 
NAGB_CORGL  (Q8NMD4    ), NAGB_CUTAK  (Q6AAI8    ), NAGB_LACRD  (A5VKB2    ), 
NAGB_STAHJ  (Q4L9T8    ), NAGB_STRMU  (Q8DV70    ), NAGB_STRSV  (A3CLX4    )
» more

PDB
[Detailed view]
17 PDB

1CD5; 1DEA; 1FQO; 1FRZ; 1FS5; 1FS6; 1FSF; 1HOR; 1HOT; 1JT9; 1NE7; 2BKV; 2BKX; 2WU1; 3HN6; 4R7T; 5HJ5
» more

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