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PROSITE entry PS01161


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General information about the entry

Entry name [info] GLC_GALNAC_ISOMERASE
Accession [info] PS01161
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00894

Name and characterization of the entry

Description [info] Glucosamine/galactosamine-6-phosphate isomerases signature.
Pattern [info] 
[LIVM]-x(3)-[GNH]-x(0,1)-[LITCRV]-x-[LIVWF]-x-[LIVMF]-x-[GS]-[LIVM]-G-x-
[DENV]-G-[HN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 277 in 277 different sequences
Number of true positive hits 276 in 276 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 12
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.64 %
Recall (true positives / (true positives + false negatives)) 95.83 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 276 sequences 

AGAI_ECOLI  (P42912), GAMA_BACSU  (O31458), GNPI1_BOVIN (A4FV08), 

GNPI1_GIAIN (O97439), GNPI1_HUMAN (P46926), GNPI1_MESAU (Q64422), 
GNPI1_MOUSE (O88958), GNPI1_PONAB (Q5R8T8), GNPI2_BOVIN (Q17QL1), 
GNPI2_GIAIN (O97440), GNPI2_HUMAN (Q8TDQ7), GNPI2_MOUSE (Q9CRC9), 
GNPI2_XENLA (Q6PA43), GNPI2_XENTR (A4IHW6), GNPI_AEDAE  (Q16HW7), 
GNPI_ANOGA  (Q5TNH5), GNPI_CAEEL  (Q9XVJ2), GNPI_DICDI  (Q54XK9), 
GNPI_DROME  (Q9VMP9), GNPI_DROPS  (Q29NT9), NAG1_CANAL  (Q04802), 
NAGB_ACTP2  (A3N353), NAGB_ACTP7  (B3GZ06), NAGB_ACTPJ  (B0BSS6), 
NAGB_AERHH  (A0KIG3), NAGB_AERS4  (A4SPM2), NAGB_ALIF1  (Q5E294), 
NAGB_ALIFM  (B5FBU7), NAGB_ALISL  (B6EN78), NAGB_ALKCK  (Q5WHY0), 
NAGB_ALKMQ  (A6TVP5), NAGB_ALKOO  (A8MIX7), NAGB_ARTS2  (A0JY49), 
NAGB_BACAA  (C3P761), NAGB_BACAC  (C3LIR9), NAGB_BACAH  (A0RI59), 
NAGB_BACAN  (Q81MH5), NAGB_BACC0  (B7JL33), NAGB_BACC1  (Q731P4), 
NAGB_BACC2  (B7IWG6), NAGB_BACC3  (C1EQS8), NAGB_BACC4  (B7H945), 
NAGB_BACC7  (B7HN32), NAGB_BACCN  (A7GS78), NAGB_BACCQ  (B9IWR7), 
NAGB_BACCR  (Q819D1), NAGB_BACCZ  (Q635M6), NAGB_BACFN  (Q5LGU0), 
NAGB_BACFR  (Q64XP2), NAGB_BACHK  (Q6HEB2), NAGB_BACMK  (A9VFF7), 
NAGB_BACP2  (A8FHS6), NAGB_BACSU  (O35000), NAGB_BACTN  (Q8A094), 
NAGB_BEUC1  (C5BY94), NAGB_BIFLD  (B3DQQ9), NAGB_BIFLO  (Q8G4N5), 
NAGB_BIFLS  (B7GQA1), NAGB_BLOFL  (Q7VR99), NAGB_BORAP  (Q0SP13), 
NAGB_BORBU  (O30564), NAGB_BORBZ  (B7J183), NAGB_BORGP  (Q662L3), 
NAGB_BORHD  (B2RZL5), NAGB_BREBN  (C0ZJF8), NAGB_CALS4  (Q8R5T0), 
NAGB_CELJU  (B3PBV0), NAGB_CITK8  (A8AJE0), NAGB_CLOAB  (Q97MK9), 
NAGB_CLOB1  (A7FX73), NAGB_CLOB6  (C3L2N7), NAGB_CLOB8  (A6M241), 
NAGB_CLOBH  (A5I5R9), NAGB_CLOBJ  (C1FV12), NAGB_CLOBK  (B1IKY4), 
NAGB_CLOBL  (A7GH51), NAGB_CLOBM  (B1KZ07), NAGB_CLONN  (A0PYW1), 
NAGB_CLOP1  (Q0TML8), NAGB_CLOPE  (Q8XHP8), NAGB_CLOPS  (Q0SQB4), 
NAGB_CLOTE  (Q890L6), NAGB_COLP3  (Q487K8), NAGB_CORA7  (C3PJW6), 
NAGB_CORDI  (Q6NJ91), NAGB_COREF  (Q8FMI6), NAGB_CORK4  (C4LL80), 
NAGB_CORU7  (B1VI88), NAGB_CROS8  (A7MQT6), NAGB_ECO24  (A7ZJ60), 
NAGB_ECO27  (B7UKV0), NAGB_ECO45  (B7MFT4), NAGB_ECO55  (B7L9L4), 
NAGB_ECO57  (P0A760), NAGB_ECO5E  (B5YQM0), NAGB_ECO7I  (B7NMM9), 
NAGB_ECO81  (B7MPI3), NAGB_ECO8A  (B7M5J6), NAGB_ECOBW  (C4ZWF4), 
NAGB_ECODH  (B1X6L1), NAGB_ECOHS  (A7ZXT7), NAGB_ECOK1  (A1A8T7), 
NAGB_ECOL5  (Q0TK13), NAGB_ECOL6  (Q8FJX7), NAGB_ECOLC  (B1IY50), 
NAGB_ECOLI  (P0A759), NAGB_ECOLU  (B7N9S4), NAGB_ECOSE  (B6HYN6), 
NAGB_ECOSM  (B1LLC0), NAGB_ECOUT  (Q1REP9), NAGB_EDWI9  (C5BGA6), 
NAGB_ENT38  (A4W844), NAGB_ENTFA  (P59687), NAGB_ERWT9  (B2VBN5), 
NAGB_ESCF3  (B7LKT5), NAGB_EXIS2  (B1YJ30), NAGB_EXISA  (C4L2C5), 
NAGB_FUSNN  (Q8REG1), NAGB_GEOSW  (C5D3L0), NAGB_GLAP5  (B8F877), 
NAGB_HAEDU  (Q7VKN1), NAGB_HAEI8  (Q4QP46), NAGB_HAEIE  (A5UB10), 
NAGB_HAEIN  (P44538), NAGB_HAHCH  (Q2S6X5), NAGB_HALH5  (Q9KFQ8), 
NAGB_HALOH  (B8D185), NAGB_HISS1  (Q0I4B9), NAGB_HISS2  (B0UUN2), 
NAGB_KLEP3  (B5XZG9), NAGB_KLEP7  (A6T6C1), NAGB_LACAC  (Q5FHT1), 
NAGB_LACDA  (Q1G817), NAGB_LACDB  (Q047I3), NAGB_LACH4  (A8YTN8), 
NAGB_LACJO  (Q74HC4), NAGB_LACLA  (Q9CFA8), NAGB_LACLM  (A2RJR7), 
NAGB_LACLS  (Q02Y08), NAGB_LACP3  (Q033M5), NAGB_LACP7  (A9KIR8), 
NAGB_LACPL  (Q88ZS6), NAGB_LATSS  (Q38YK9), NAGB_LEUCK  (B1MX39), 
NAGB_LEUMM  (Q03Z95), NAGB_LIGS1  (Q1WS60), NAGB_LISIN  (Q92D64), 
NAGB_LISMC  (C1L1M8), NAGB_LISMF  (Q721K9), NAGB_LISMH  (B8DEH8), 
NAGB_LISMO  (Q8Y8E7), NAGB_LISW6  (A0AH75), NAGB_LYSSC  (B1HUU8), 
NAGB_LYSSH  (P59686), NAGB_MALP2  (Q8EWM7), NAGB_MANSM  (Q65QE8), 
NAGB_MARMS  (A6VVU9), NAGB_MARSD  (C6C0A2), NAGB_MYCMS  (Q6MSF4), 
NAGB_MYCPU  (Q98QJ9), NAGB_MYCS2  (A0QU88), NAGB_OCEIH  (Q8ESL6), 
NAGB_OENOB  (Q04G36), NAGB_PARD8  (A6LHV2), NAGB_PASMU  (Q9CMF4), 
NAGB_PECAS  (Q6D7J9), NAGB_PECCP  (C6DBY4), NAGB_PEDPA  (Q03H91), 
NAGB_PHOLL  (Q7MB61), NAGB_PHOV8  (A6L7Q8), NAGB_PORG3  (B2RJ01), 
NAGB_PORGI  (Q7MW43), NAGB_PROMH  (B4ESJ0), NAGB_PSECP  (B8HAX3), 
NAGB_PSET1  (Q3ID09), NAGB_PSYIN  (A1SS81), NAGB_RHOBA  (Q7UVM5), 
NAGB_RHOJR  (Q0SGH6), NAGB_RHOOB  (C1AW66), NAGB_SALA4  (B5EZC1), 
NAGB_SALAR  (A9MKA9), NAGB_SALCH  (Q57RQ0), NAGB_SALDC  (B5FNB9), 
NAGB_SALEP  (B5QWC8), NAGB_SALG2  (B5R824), NAGB_SALHS  (B4TB82), 
NAGB_SALNS  (B4SYN7), NAGB_SALPA  (Q5PCH6), NAGB_SALPB  (A9MUG8), 
NAGB_SALPC  (C0PWA5), NAGB_SALPK  (B5BCC5), NAGB_SALSV  (B4TPZ8), 
NAGB_SALTI  (Q8Z8G0), NAGB_SALTY  (Q8ZQX7), NAGB_SERP5  (A8GB41), 
NAGB_SHEHH  (B0TTP5), NAGB_SHELP  (A3QB39), NAGB_SHESH  (A8FRI2), 
NAGB_SHEWM  (B1KFS0), NAGB_SHIB3  (B2TU53), NAGB_SHIBS  (Q324M6), 
NAGB_SHIDS  (Q32IQ2), NAGB_SHIF8  (Q0T6S6), NAGB_SHIFL  (P59688), 
NAGB_SHISS  (Q3Z4C2), NAGB_STAA1  (A7WZ06), NAGB_STAA2  (A6TZ46), 
NAGB_STAA3  (Q2FJ71), NAGB_STAA8  (Q2G0K8), NAGB_STAA9  (A5IQC3), 
NAGB_STAAB  (Q2YS95), NAGB_STAAC  (Q5HIA6), NAGB_STAAE  (A6QEM2), 
NAGB_STAAM  (P65512), NAGB_STAAN  (P99125), NAGB_STAAR  (Q6GJA0), 
NAGB_STAAS  (Q6GBR8), NAGB_STAAT  (A8YZR7), NAGB_STAAW  (P65513), 
NAGB_STAEQ  (Q5HRH8), NAGB_STAES  (Q8CTR3), NAGB_STAS1  (Q49VB6), 
NAGB_STRA1  (Q3K1Q7), NAGB_STRA3  (P65514), NAGB_STRA5  (P65515), 
NAGB_STRAW  (P59689), NAGB_STRCO  (Q9K487), NAGB_STRE4  (C0M970), 
NAGB_STREM  (B4U206), NAGB_STRGC  (A8AYK4), NAGB_STRP1  (Q99Z50), 
NAGB_STRP2  (Q04JT5), NAGB_STRP3  (P0DC66), NAGB_STRP4  (B5E5S3), 
NAGB_STRP6  (Q5XBG4), NAGB_STRP7  (C1C814), NAGB_STRP8  (Q8P0E0), 
NAGB_STRPG  (A2RDX6), NAGB_STRPI  (B1ICL5), NAGB_STRPJ  (B8ZKX4), 
NAGB_STRPN  (Q97Q16), NAGB_STRPQ  (P0DC67), NAGB_STRPZ  (B5XM45), 
NAGB_STRR6  (Q8DPA1), NAGB_STRS2  (A4W0A3), NAGB_STRS7  (C0MCU1), 
NAGB_STRSY  (A4VU11), NAGB_STRTD  (Q03LS1), NAGB_STRU0  (B9DWG4), 
NAGB_STRZJ  (C1CF03), NAGB_STRZP  (C1CLC3), NAGB_STRZT  (C1CQU2), 
NAGB_THEP3  (B0K934), NAGB_THEPX  (B0K0J7), NAGB_TOLAT  (C4L889), 
NAGB_TREDE  (Q73QV6), NAGB_VIBA3  (B7VTI0), NAGB_VIBC1  (A7N5W3), 
NAGB_VIBC3  (A5F125), NAGB_VIBCH  (Q9KKS5), NAGB_VIBCM  (C3LWT7), 
NAGB_VIBPA  (Q87K60), NAGB_VIBVU  (Q8D4T9), NAGB_VIBVY  (Q7MGE1), 
NAGB_YERE8  (A1JQE8), NAGB_YERP3  (A7FKU3), NAGB_YERPA  (Q1C537), 
NAGB_YERPB  (B2K8A2), NAGB_YERPE  (Q8ZDE1), NAGB_YERPG  (A9R7S4), 
NAGB_YERPN  (Q1CKN7), NAGB_YERPP  (A4TNY0), NAGB_YERPS  (Q66DC7), 
NAGB_YERPY  (B1JG88), Y258_BACTN  (Q8AB53), YIEK_ECOLI  (P31470)
» more

UniProtKB/Swiss-Prot
False negative sequences		 12 sequences 

NAGB_ACHLI  (A9NEX8), NAGB_BACVZ  (A7Z975), NAGB_CLOBA  (B2V163), 

NAGB_CLOBB  (B2TL69), NAGB_CLOD6  (Q18AL0), NAGB_CORGB  (A4QH44), 
NAGB_CORGL  (Q8NMD4), NAGB_CUTAK  (Q6AAI8), NAGB_LIMRD  (A5VKB2), 
NAGB_STAHJ  (Q4L9T8), NAGB_STRMU  (Q8DV70), NAGB_STRSV  (A3CLX4)
» more

UniProtKB/Swiss-Prot
False positive sequences		 1 sequence 

T3R_CATRO   (A0A161CAI1)


				
	

	

		PDB
[Detailed view]		
		
			19 PDB
			


			1CD5; 1DEA; 1FQO; 1FRZ; 1FS5; 1FS6; 1FSF; 1HOR; 1HOT; 1JT9; 1NE7; 2BKV; 
			
				2BKX; 2WU1; 3HN6; 4R7T; 5HJ5; 7LQM; 7LQN
			
			

			» more