PROSITE entry PS01161
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General information about the entry
Entry name [info] | GLC_GALNAC_ISOMERASE |
Accession [info] | PS01161 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1995 CREATED;
01-DEC-2004 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00894 |
Name and characterization of the entry
Description [info] | Glucosamine/galactosamine-6-phosphate isomerases signature. |
Pattern [info] |
[LIVM]-x(3)-[GNH]-x(0,1)-[LITCRV]-x-[LIVWF]-x-[LIVMF]-x-[GS]-[LIVM]-G-x- [DENV]-G-[HN]. |
Numerical results [info]
Total number of hits | 277 in 277 different sequences |
Number of true positive hits | 276 in 276 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 1 |
Number of false negative sequences | 12 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 99.64 % |
Recall (true positives / (true positives + false negatives)) | 95.83 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
276 sequences
AGAI_ECOLI (P42912), GAMA_BACSU (O31458), GNPI1_BOVIN (A4FV08), GNPI1_GIAIN (O97439), GNPI1_HUMAN (P46926), GNPI1_MESAU (Q64422), GNPI1_MOUSE (O88958), GNPI1_PONAB (Q5R8T8), GNPI2_BOVIN (Q17QL1), GNPI2_GIAIN (O97440), GNPI2_HUMAN (Q8TDQ7), GNPI2_MOUSE (Q9CRC9), GNPI2_XENLA (Q6PA43), GNPI2_XENTR (A4IHW6), GNPI_AEDAE (Q16HW7), GNPI_ANOGA (Q5TNH5), GNPI_CAEEL (Q9XVJ2), GNPI_DICDI (Q54XK9), GNPI_DROME (Q9VMP9), GNPI_DROPS (Q29NT9), NAG1_CANAL (Q04802), NAGB_ACTP2 (A3N353), NAGB_ACTP7 (B3GZ06), NAGB_ACTPJ (B0BSS6), NAGB_AERHH (A0KIG3), NAGB_AERS4 (A4SPM2), NAGB_ALIF1 (Q5E294), NAGB_ALIFM (B5FBU7), NAGB_ALISL (B6EN78), NAGB_ALKCK (Q5WHY0), NAGB_ALKMQ (A6TVP5), NAGB_ALKOO (A8MIX7), NAGB_ARTS2 (A0JY49), NAGB_BACAA (C3P761), NAGB_BACAC (C3LIR9), NAGB_BACAH (A0RI59), NAGB_BACAN (Q81MH5), NAGB_BACC0 (B7JL33), NAGB_BACC1 (Q731P4), NAGB_BACC2 (B7IWG6), NAGB_BACC3 (C1EQS8), NAGB_BACC4 (B7H945), NAGB_BACC7 (B7HN32), NAGB_BACCN (A7GS78), NAGB_BACCQ (B9IWR7), NAGB_BACCR (Q819D1), NAGB_BACCZ (Q635M6), NAGB_BACFN (Q5LGU0), NAGB_BACFR (Q64XP2), NAGB_BACHK (Q6HEB2), NAGB_BACMK (A9VFF7), NAGB_BACP2 (A8FHS6), NAGB_BACSU (O35000), NAGB_BACTN (Q8A094), NAGB_BEUC1 (C5BY94), NAGB_BIFLD (B3DQQ9), NAGB_BIFLO (Q8G4N5), NAGB_BIFLS (B7GQA1), NAGB_BLOFL (Q7VR99), NAGB_BORAP (Q0SP13), NAGB_BORBU (O30564), NAGB_BORBZ (B7J183), NAGB_BORGP (Q662L3), NAGB_BORHD (B2RZL5), NAGB_BREBN (C0ZJF8), NAGB_CALS4 (Q8R5T0), NAGB_CELJU (B3PBV0), NAGB_CITK8 (A8AJE0), NAGB_CLOAB (Q97MK9), NAGB_CLOB1 (A7FX73), NAGB_CLOB6 (C3L2N7), NAGB_CLOB8 (A6M241), NAGB_CLOBH (A5I5R9), NAGB_CLOBJ (C1FV12), NAGB_CLOBK (B1IKY4), NAGB_CLOBL (A7GH51), NAGB_CLOBM (B1KZ07), NAGB_CLONN (A0PYW1), NAGB_CLOP1 (Q0TML8), NAGB_CLOPE (Q8XHP8), NAGB_CLOPS (Q0SQB4), NAGB_CLOTE (Q890L6), NAGB_COLP3 (Q487K8), NAGB_CORA7 (C3PJW6), NAGB_CORDI (Q6NJ91), NAGB_COREF (Q8FMI6), NAGB_CORK4 (C4LL80), NAGB_CORU7 (B1VI88), NAGB_CROS8 (A7MQT6), NAGB_ECO24 (A7ZJ60), NAGB_ECO27 (B7UKV0), NAGB_ECO45 (B7MFT4), NAGB_ECO55 (B7L9L4), NAGB_ECO57 (P0A760), NAGB_ECO5E (B5YQM0), NAGB_ECO7I (B7NMM9), NAGB_ECO81 (B7MPI3), NAGB_ECO8A (B7M5J6), NAGB_ECOBW (C4ZWF4), NAGB_ECODH (B1X6L1), NAGB_ECOHS (A7ZXT7), NAGB_ECOK1 (A1A8T7), NAGB_ECOL5 (Q0TK13), NAGB_ECOL6 (Q8FJX7), NAGB_ECOLC (B1IY50), NAGB_ECOLI (P0A759), NAGB_ECOLU (B7N9S4), NAGB_ECOSE (B6HYN6), NAGB_ECOSM (B1LLC0), NAGB_ECOUT (Q1REP9), NAGB_EDWI9 (C5BGA6), NAGB_ENT38 (A4W844), NAGB_ENTFA (P59687), NAGB_ERWT9 (B2VBN5), NAGB_ESCF3 (B7LKT5), NAGB_EXIS2 (B1YJ30), NAGB_EXISA (C4L2C5), NAGB_FUSNN (Q8REG1), NAGB_GEOSW (C5D3L0), NAGB_GLAP5 (B8F877), NAGB_HAEDU (Q7VKN1), NAGB_HAEI8 (Q4QP46), NAGB_HAEIE (A5UB10), NAGB_HAEIN (P44538), NAGB_HAHCH (Q2S6X5), NAGB_HALH5 (Q9KFQ8), NAGB_HALOH (B8D185), NAGB_HISS1 (Q0I4B9), NAGB_HISS2 (B0UUN2), NAGB_KLEP3 (B5XZG9), NAGB_KLEP7 (A6T6C1), NAGB_LACAC (Q5FHT1), NAGB_LACDA (Q1G817), NAGB_LACDB (Q047I3), NAGB_LACH4 (A8YTN8), NAGB_LACJO (Q74HC4), NAGB_LACLA (Q9CFA8), NAGB_LACLM (A2RJR7), NAGB_LACLS (Q02Y08), NAGB_LACP3 (Q033M5), NAGB_LACP7 (A9KIR8), NAGB_LACPL (Q88ZS6), NAGB_LATSS (Q38YK9), NAGB_LEUCK (B1MX39), NAGB_LEUMM (Q03Z95), NAGB_LIGS1 (Q1WS60), NAGB_LISIN (Q92D64), NAGB_LISMC (C1L1M8), NAGB_LISMF (Q721K9), NAGB_LISMH (B8DEH8), NAGB_LISMO (Q8Y8E7), NAGB_LISW6 (A0AH75), NAGB_LYSSC (B1HUU8), NAGB_LYSSH (P59686), NAGB_MALP2 (Q8EWM7), NAGB_MANSM (Q65QE8), NAGB_MARMS (A6VVU9), NAGB_MARSD (C6C0A2), NAGB_MYCMS (Q6MSF4), NAGB_MYCPU (Q98QJ9), NAGB_MYCS2 (A0QU88), NAGB_OCEIH (Q8ESL6), NAGB_OENOB (Q04G36), NAGB_PARD8 (A6LHV2), NAGB_PASMU (Q9CMF4), NAGB_PECAS (Q6D7J9), NAGB_PECCP (C6DBY4), NAGB_PEDPA (Q03H91), NAGB_PHOLL (Q7MB61), NAGB_PHOV8 (A6L7Q8), NAGB_PORG3 (B2RJ01), NAGB_PORGI (Q7MW43), NAGB_PROMH (B4ESJ0), NAGB_PSECP (B8HAX3), NAGB_PSET1 (Q3ID09), NAGB_PSYIN (A1SS81), NAGB_RHOBA (Q7UVM5), NAGB_RHOJR (Q0SGH6), NAGB_RHOOB (C1AW66), NAGB_SALA4 (B5EZC1), NAGB_SALAR (A9MKA9), NAGB_SALCH (Q57RQ0), NAGB_SALDC (B5FNB9), NAGB_SALEP (B5QWC8), NAGB_SALG2 (B5R824), NAGB_SALHS (B4TB82), NAGB_SALNS (B4SYN7), NAGB_SALPA (Q5PCH6), NAGB_SALPB (A9MUG8), NAGB_SALPC (C0PWA5), NAGB_SALPK (B5BCC5), NAGB_SALSV (B4TPZ8), NAGB_SALTI (Q8Z8G0), NAGB_SALTY (Q8ZQX7), NAGB_SERP5 (A8GB41), NAGB_SHEHH (B0TTP5), NAGB_SHELP (A3QB39), NAGB_SHESH (A8FRI2), NAGB_SHEWM (B1KFS0), NAGB_SHIB3 (B2TU53), NAGB_SHIBS (Q324M6), NAGB_SHIDS (Q32IQ2), NAGB_SHIF8 (Q0T6S6), NAGB_SHIFL (P59688), NAGB_SHISS (Q3Z4C2), NAGB_STAA1 (A7WZ06), NAGB_STAA2 (A6TZ46), NAGB_STAA3 (Q2FJ71), NAGB_STAA8 (Q2G0K8), NAGB_STAA9 (A5IQC3), NAGB_STAAB (Q2YS95), NAGB_STAAC (Q5HIA6), NAGB_STAAE (A6QEM2), NAGB_STAAM (P65512), NAGB_STAAN (P99125), NAGB_STAAR (Q6GJA0), NAGB_STAAS (Q6GBR8), NAGB_STAAT (A8YZR7), NAGB_STAAW (P65513), NAGB_STAEQ (Q5HRH8), NAGB_STAES (Q8CTR3), NAGB_STAS1 (Q49VB6), NAGB_STRA1 (Q3K1Q7), NAGB_STRA3 (P65514), NAGB_STRA5 (P65515), NAGB_STRAW (P59689), NAGB_STRCO (Q9K487), NAGB_STRE4 (C0M970), NAGB_STREM (B4U206), NAGB_STRGC (A8AYK4), NAGB_STRP1 (Q99Z50), NAGB_STRP2 (Q04JT5), NAGB_STRP3 (P0DC66), NAGB_STRP4 (B5E5S3), NAGB_STRP6 (Q5XBG4), NAGB_STRP7 (C1C814), NAGB_STRP8 (Q8P0E0), NAGB_STRPG (A2RDX6), NAGB_STRPI (B1ICL5), NAGB_STRPJ (B8ZKX4), NAGB_STRPN (Q97Q16), NAGB_STRPQ (P0DC67), NAGB_STRPZ (B5XM45), NAGB_STRR6 (Q8DPA1), NAGB_STRS2 (A4W0A3), NAGB_STRS7 (C0MCU1), NAGB_STRSY (A4VU11), NAGB_STRTD (Q03LS1), NAGB_STRU0 (B9DWG4), NAGB_STRZJ (C1CF03), NAGB_STRZP (C1CLC3), NAGB_STRZT (C1CQU2), NAGB_THEP3 (B0K934), NAGB_THEPX (B0K0J7), NAGB_TOLAT (C4L889), NAGB_TREDE (Q73QV6), NAGB_VIBA3 (B7VTI0), NAGB_VIBC1 (A7N5W3), NAGB_VIBC3 (A5F125), NAGB_VIBCH (Q9KKS5), NAGB_VIBCM (C3LWT7), NAGB_VIBPA (Q87K60), NAGB_VIBVU (Q8D4T9), NAGB_VIBVY (Q7MGE1), NAGB_YERE8 (A1JQE8), NAGB_YERP3 (A7FKU3), NAGB_YERPA (Q1C537), NAGB_YERPB (B2K8A2), NAGB_YERPE (Q8ZDE1), NAGB_YERPG (A9R7S4), NAGB_YERPN (Q1CKN7), NAGB_YERPP (A4TNY0), NAGB_YERPS (Q66DC7), NAGB_YERPY (B1JG88), Y258_BACTN (Q8AB53), YIEK_ECOLI (P31470)» more
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UniProtKB/Swiss-Prot False negative sequences |
12 sequences
NAGB_ACHLI (A9NEX8), NAGB_BACVZ (A7Z975), NAGB_CLOBA (B2V163), NAGB_CLOBB (B2TL69), NAGB_CLOD6 (Q18AL0), NAGB_CORGB (A4QH44), NAGB_CORGL (Q8NMD4), NAGB_CUTAK (Q6AAI8), NAGB_LIMRD (A5VKB2), NAGB_STAHJ (Q4L9T8), NAGB_STRMU (Q8DV70), NAGB_STRSV (A3CLX4)» more |
UniProtKB/Swiss-Prot False positive sequences |
1 sequence
T3R_CATRO (A0A161CAI1) |
PDB [Detailed view] |
19 PDB
1CD5; 1DEA; 1FQO; 1FRZ; 1FS5; 1FS6; 1FSF; 1HOR; 1HOT; 1JT9; 1NE7; 2BKV; 2BKX; 2WU1; 3HN6; 4R7T; 5HJ5; 7LQM; 7LQN » more |