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PROSITE entry PS01164


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General information about the entry

Entry name [info] COPPER_AMINE_OXID_1
Accession [info] PS01164
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-MAY-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00895

Name and characterization of the entry

Description [info] Copper amine oxidase topaquinone signature.
Pattern [info] 
[LIVM]-[LIVMA]-[LIVMF]-x(4)-[ST]-x(2)-N-Y-[DE]-[YN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 30 in 30 different sequences
Number of true positive hits 28 in 28 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 93.33 %
Recall (true positives / (true positives + false negatives)) 96.55 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] cofactor_TPQ at position 8
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 28 sequences 

AMO1_ARTS1  (Q07121), AMO1_ASPNG  (Q12556), AMO2_ARATH  (P0DO00), 

AMO2_ARTS1  (Q07123), AMOH_ARTGO  (Q59118), AMO_ECOLI   (P46883), 
AMO_KLEAE   (P49250), AMO_KLEM8   (P80695), AMO_LENCU   (P49252), 
AMO_PEA (Q43077), AMO_PICAN   (P12807), AMO_PINMG   (H2A0M3), 
AO1_ARATH   (O23349), AOC1_HUMAN  (P19801), AOC1_MOUSE  (Q8JZQ5), 
AOC1_PIG(Q9TRC7), AOC1_RAT(P36633), AOC2_HUMAN  (O75106), 
AOC2_MOUSE  (Q812C9), AOC3_BOVIN  (Q9TTK6), AOC3_HUMAN  (Q16853), 
AOC3_MOUSE  (O70423), AOC3_RAT(O08590), AOCX_BOVIN  (Q29437), 
AOCY_BOVIN  (O46406), CAO1_SCHPO  (Q9P7F2), CAO2_SCHPO  (O42890), 
PAOX_ARTGO  (P46881)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

CAOG1_ARATH (Q8H1H9)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			2 sequences
			


			
CHAC_YEAST  (P32656), TOP2_IIV3   (Q196X4)


				
	

	

		PDB
[Detailed view]		
		
			132 PDB
			


			1A2V; 1AV4; 1AVK; 1AVL; 1D6U; 1D6Y; 1D6Z; 1DYU; 1EKM; 1IQX; 1IQY; 1IU7; 
			
				1IVU; 1IVW; 1IVX; 1JRQ; 1KSI; 1LVN; 1OAC; 1PU4; 1QAF; 1QAK; 1QAL; 1RJO; 
				1SIH; 1SII; 1SPU; 1TU5; 1UI7; 1UI8; 1US1; 1W2Z; 1W4N; 1W6C; 1W6G; 1WMN; 
				1WMO; 1WMP; 2BT3; 2C10; 2C11; 2CFD; 2CFG; 2CFK; 2CFL; 2CFW; 2CG0; 2CG1; 
				2CWT; 2CWU; 2CWV; 2D1W; 2OOV; 2OQE; 2PNC; 2W0Q; 2WGQ; 2WO0; 2WOF; 2WOH; 
				2Y73; 2Y74; 2YX9; 2ZL8; 3ALA; 3AMO; 3HI7; 3HIG; 3HII; 3K5T; 3N9H; 3SX1; 
				3SXX; 3T0U; 3WA2; 3WA3; 3X3X; 3X3Y; 3X3Z; 3X40; 3X41; 3X42; 4BTW; 4BTX; 
				4BTY; 4EV2; 4EV5; 4KFD; 4KFE; 4KFF; 5ZOU; 5ZOW; 5ZOX; 5ZOY; 5ZOZ; 5ZP0; 
				5ZP1; 5ZP2; 5ZP3; 5ZP4; 5ZP5; 5ZP6; 5ZP7; 5ZP8; 5ZP9; 5ZPA; 5ZPB; 5ZPC; 
				5ZPD; 5ZPE; 5ZPF; 5ZPG; 5ZPH; 5ZPI; 5ZPJ; 5ZPK; 5ZPL; 5ZPM; 5ZPN; 5ZPO; 
				5ZPP; 5ZPQ; 5ZPR; 5ZPS; 5ZPT; 6EZZ; 6L9C; 7F8K; 7WNO; 7WNP; 7YNH; 8J6G
			
			

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