Home  |  Contact
Entry: PS01168

General information about the entry

Entry name [info] RIBOSOMAL_S27E
Accession [info] PS01168
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE;
02-JUN-2021 INFO UPDATE.
PROSITE Doc. [info] PDOC00898

Name and characterization of the entry

Description [info] Ribosomal protein S27e signature.
Pattern [info] 
[QKRTE]-C-x(2)-C-x(6)-F-[GSDA]-x-[PSA]-x(5)-C-x(2)-C-[GSAQ]-x(2)-[LIV]-
x(2)-[PS]-x-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2021_03 which contains 565'254 sequence entries.


Total number of hits 49 in 49 different sequences
Number of true positive hits 49 in 49 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 8
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.96 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Site [info] zinc(?) at position 2
Site [info] zinc(?) at position 4
Site [info] zinc(?) at position 11
Site [info] zinc(?) at position 13
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 49 sequences 

RS271_ARATH (O64650    ), RS272_ARATH (Q9M2F1    ), RS273_ARATH (Q8L953    ), 

RS27A_YEAST (P35997    ), RS27B_YEAST (P38711    ), RS27L_BOVIN (Q3T0B7    ), 
RS27L_HUMAN (Q71UM5    ), RS27L_MOUSE (Q6ZWY3    ), RS27L_RAT   (P24051    ), 
RS27_AERPE  (Q9YF01    ), RS27_ARCFU  (O28935    ), RS27_BOVIN  (Q2KHT7    ), 
RS27_CHLRE  (P47903    ), RS27_ENTHI  (P38654    ), RS27_HALS3  (B0R3M1    ), 
RS27_HALSA  (Q9HRT7    ), RS27_HOMAM  (P55833    ), RS27_HORVU  (Q96564    ), 
RS27_HUMAN  (P42677    ), RS27_HYPBU  (A2BN94    ), RS27_METAC  (P61931    ), 
RS27_METB6  (A7I9Q6    ), RS27_METBF  (Q46C77    ), RS27_METHJ  (Q2FPD4    ), 
RS27_METJA  (P54028    ), RS27_METKA  (Q8TY87    ), RS27_METMA  (P61932    ), 
RS27_METTH  (O27364    ), RS27_MOUSE  (Q6ZWU9    ), RS27_PONAB  (Q5RBK1    ), 
RS27_PYRAB  (Q9UXZ3    ), RS27_PYRAE  (Q8ZTY4    ), RS27_PYRAR  (A4WLR8    ), 
RS27_PYRCJ  (A3MUV2    ), RS27_PYRFU  (Q8U474    ), RS27_PYRHO  (P58078    ), 
RS27_PYRIL  (A1RRN0    ), RS27_PYRNV  (B1YAF9    ), RS27_RAT    (Q71TY3    ), 
RS27_SACS2  (Q97Z80    ), RS27_SCHPO  (O74330    ), RS27_SULAC  (Q4J9B1    ), 
RS27_SULTO  (Q973F9    ), RS27_THEAC  (Q9HIX2    ), RS27_THEGJ  (C5A6X9    ), 
RS27_THEKO  (Q5JE50    ), RS27_THEON  (B6YT34    ), RS27_THEVO  (Q97BP1    ), 
RS27_XENLA  (P47904    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 8 sequences 

RS27_CAEEL  (Q9TXP0    ), RS27_DICDI  (Q8T1V4    ), RS27_HALLT  (B9LML9    ), 

RS27_HALMA  (Q5UX21    ), RS27_METLZ  (A2ST12    ), RS27_METMJ  (A3CX76    ), 
RS27_METPE  (B8GGQ3    ), RS27_NATPD  (Q3ISI7    )
» more

PDB
[Detailed view]		 169 PDB

1QXF; 3J6X; 3J6Y; 3J77; 3J78; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4N; 4V6I; 4V6U; 4V6X; 4V88; 4V8Y; 4V8Z; 4V92; 5A2Q; 5AJ0; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FLX; 5I4L; 5JB3; 5JBH; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LL6; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OA3; 5OBM; 5ON6; 5T2C; 5TBW; 5TGA; 5TGM; 5VYC; 5WYJ; 5WYK; 6EK0; 6EML; 6FAI; 6FEC; 6G18; 6G4S; 6G4W; 6G51; 6G53; 6G5H; 6G5I; 6GQ1; 6GQB; 6GQV; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6KE6; 6LQP; 6LQQ; 6LQR; 6LQS; 6LQT; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QZP; 6RBD; 6RBE; 6S47; 6SKF; 6SKG; 6SNT; 6SV4; 6SW9; 6SWC; 6SWD; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6WDR; 6WOO; 6XA1; 6XIQ; 6XIR; 6Y0G; 6Y2L; 6Y57; 6Y7C; 6YBD; 6YBW; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZCE; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZMW; 6ZN5; 6ZOJ; 6ZOK; 6ZON; 6ZP4; 6ZQA; 6ZQB; 6ZQC; 6ZQD; 6ZQE; 6ZQF; 6ZQG; 6ZU9; 6ZVH; 6ZVI; 6ZVJ; 6ZXD; 6ZXE; 6ZXF; 6ZXG; 6ZXH; 7A09; 7A1G; 7AJT; 7AJU; 7K5I
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission