PROSITE entry PS01168
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PURL: https://purl.expasy.org/prosite/signature/PS01168
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General information about the entry
| Entry name [info] | RIBOSOMAL_S27E |
| Accession [info] | PS01168 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00898 |
Name and characterization of the entry
| Description [info] | Ribosomal protein S27e signature. |
| Pattern [info] |
[QKRTE]-C-x(2)-C-x(6)-F-[GSDA]-x-[PSA]-x(5)-C-x(2)-C-[GSAQ]-x(2)-[LIV]- x(2)-[PS]-x-G. |
Numerical results [info]
| Total number of hits | 51 in 51 different sequences |
| Number of true positive hits | 51 in 51 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 8 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 86.44 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Site [info] | zinc(?) at position 2 |
| Site [info] | zinc(?) at position 4 |
| Site [info] | zinc(?) at position 11 |
| Site [info] | zinc(?) at position 13 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
51 sequences
RS271_ARATH (O64650), RS272_ARATH (Q9M2F1), RS273_ARATH (Q8L953),» more
|
| UniProtKB/Swiss-Prot False negative sequences |
8 sequences
RS27_CAEEL (Q9TXP0), RS27_DICDI (Q8T1V4), RS27_HALLT (B9LML9),» more |
| PDB [Detailed view] |
436 PDB
1QXF; 3J6X; 3J6Y; 3J77; 3J78; 3JAG; 3JAH; 3JAI; 4D5L; 4D61; 4KZX; 4KZY; » more |