PROSITE entry PS01168
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General information about the entry
| Entry name [info] | RIBOSOMAL_S27E |
| Accession [info] | PS01168 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00898 |
Name and characterization of the entry
| Description [info] | Ribosomal protein S27e signature. |
| Pattern [info] |
[QKRTE]-C-x(2)-C-x(6)-F-[GSDA]-x-[PSA]-x(5)-C-x(2)-C-[GSAQ]-x(2)-[LIV]- x(2)-[PS]-x-G. |
Numerical results [info]
| Total number of hits | 50 in 50 different sequences |
| Number of true positive hits | 50 in 50 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 8 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 86.21 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Site [info] | zinc(?) at position 2 |
| Site [info] | zinc(?) at position 4 |
| Site [info] | zinc(?) at position 11 |
| Site [info] | zinc(?) at position 13 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
50 sequences
RS271_ARATH (O64650), RS272_ARATH (Q9M2F1), RS273_ARATH (Q8L953), RS27A_YEAST (P35997), RS27B_YEAST (P38711), RS27L_BOVIN (Q3T0B7), RS27L_HUMAN (Q71UM5), RS27L_MOUSE (Q6ZWY3), RS27L_RAT (P24051), RS27_AERPE (Q9YF01), RS27_ARCFU (O28935), RS27_BOVIN (Q2KHT7), RS27_CANAL (A0A1D8PTI7), RS27_CHLRE (P47903), RS27_ENTH1 (P38654), RS27_HALS3 (B0R3M1), RS27_HALSA (Q9HRT7), RS27_HOMAM (P55833), RS27_HORVU (Q96564), RS27_HUMAN (P42677), RS27_HYPBU (A2BN94), RS27_METAC (P61931), RS27_METB6 (A7I9Q6), RS27_METBF (Q46C77), RS27_METHJ (Q2FPD4), RS27_METJA (P54028), RS27_METKA (Q8TY87), RS27_METMA (P61932), RS27_METTH (O27364), RS27_MOUSE (Q6ZWU9), RS27_PONAB (Q5RBK1), RS27_PYRAB (Q9UXZ3), RS27_PYRAE (Q8ZTY4), RS27_PYRAR (A4WLR8), RS27_PYRCJ (A3MUV2), RS27_PYRFU (Q8U474), RS27_PYRHO (P58078), RS27_PYRIL (A1RRN0), RS27_PYRNV (B1YAF9), RS27_RAT(Q71TY3), RS27_SACS2 (Q97Z80), RS27_SCHPO (O74330), RS27_SULAC (Q4J9B1), RS27_SULTO (Q973F9), RS27_THEAC (Q9HIX2), RS27_THEGJ (C5A6X9), RS27_THEKO (Q5JE50), RS27_THEON (B6YT34), RS27_THEVO (Q97BP1), RS27_XENLA (P47904)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
8 sequences
RS27_CAEEL (Q9TXP0), RS27_DICDI (Q8T1V4), RS27_HALLT (B9LML9), RS27_HALMA (Q5UX21), RS27_METLZ (A2ST12), RS27_METMJ (A3CX76), RS27_METPE (B8GGQ3), RS27_NATPD (Q3ISI7)» more |
| PDB [Detailed view] |
239 PDB
1QXF; 3J6X; 3J6Y; 3J77; 3J78; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4N; 4V6I; 4V6U; 4V6X; 4V88; 4V8Y; 4V8Z; 4V92; 5A2Q; 5AJ0; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FLX; 5I4L; 5JB3; 5JBH; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LL6; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OA3; 5OBM; 5ON6; 5T2C; 5TBW; 5TGA; 5TGM; 5VYC; 5WYJ; 5WYK; 6EML; 6FAI; 6FEC; 6G18; 6G4S; 6G4W; 6G51; 6G53; 6G5H; 6G5I; 6GQ1; 6GQB; 6GQV; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6KE6; 6LQP; 6LQQ; 6LQR; 6LQS; 6LQT; 6MTD; 6MTE; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QZP; 6RBD; 6RBE; 6S47; 6SKF; 6SKG; 6SNT; 6SV4; 6SW9; 6SWC; 6SWD; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6WDR; 6WOO; 6XA1; 6XIQ; 6XIR; 6Y0G; 6Y2L; 6Y57; 6Y7C; 6YBD; 6YBW; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZCE; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZMW; 6ZN5; 6ZOJ; 6ZOK; 6ZON; 6ZP4; 6ZQA; 6ZQB; 6ZQC; 6ZQD; 6ZQE; 6ZQF; 6ZQG; 6ZU9; 6ZUO; 6ZV6; 6ZVH; 6ZVI; 6ZVJ; 6ZXD; 6ZXE; 6ZXF; 6ZXG; 6ZXH; 7A09; 7A1G; 7AJT; 7AJU; 7B7D; 7CPU; 7CPV; 7D4I; 7D5T; 7D63; 7K5I; 7LS1; 7LS2; 7MPI; 7MPJ; 7MQ8; 7MQ9; 7MQA; 7N8B; 7NRC; 7NRD; 7OSA; 7OSM; 7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QP6; 7QP7; 7R4X; 7RR5; 7TQL; 7WTL; 7WTM; 7WTN; 7WTO; 7WTP; 7WTQ; 7WTR; 7WTS; 7WTT; 7WTU; 7WTV; 7WTW; 7WTX; 7WTZ; 7WU0; 7XNX; 7XNY; 7ZAG; 7ZAH; 7ZAI; 7ZHG; 7ZPQ; 7ZRS; 7ZUW; 7ZUX; 7ZW0; 8BQD; 8BQX; 8C00; 8C01; 8C83; 8CAH; 8CAS; 8CBJ; 8G5Y; 8G60; 8G61; 8G6J; 8GLP » more |