Home  |  Contact
Entry: PS01168

General information about the entry

Entry name [info] RIBOSOMAL_S27E
Accession [info] PS01168
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE;
05-JUN-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00898

Name and characterization of the entry

Description [info] Ribosomal protein S27e signature.
Pattern [info] 
[QKRTE]-C-x(2)-C-x(6)-F-[GSDA]-x-[PSA]-x(5)-C-x(2)-C-[GSAQ]-x(2)-[LIV]-
x(2)-[PS]-x-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_05 which contains 560'292 sequence entries.


Total number of hits 49 in 49 different sequences
Number of true positive hits 49 in 49 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 8
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.96 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Site [info] zinc(?) at position 2
Site [info] zinc(?) at position 4
Site [info] zinc(?) at position 11
Site [info] zinc(?) at position 13
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 49 sequences 

RS271_ARATH (O64650    ), RS272_ARATH (Q9M2F1    ), RS273_ARATH (Q8L953    ), 

RS27A_YEAST (P35997    ), RS27B_YEAST (P38711    ), RS27L_BOVIN (Q3T0B7    ), 
RS27L_HUMAN (Q71UM5    ), RS27L_MOUSE (Q6ZWY3    ), RS27L_RAT   (P24051    ), 
RS27_AERPE  (Q9YF01    ), RS27_ARCFU  (O28935    ), RS27_BOVIN  (Q2KHT7    ), 
RS27_CHLRE  (P47903    ), RS27_ENTHI  (P38654    ), RS27_HALS3  (B0R3M1    ), 
RS27_HALSA  (Q9HRT7    ), RS27_HOMAM  (P55833    ), RS27_HORVU  (Q96564    ), 
RS27_HUMAN  (P42677    ), RS27_HYPBU  (A2BN94    ), RS27_METAC  (P61931    ), 
RS27_METB6  (A7I9Q6    ), RS27_METBF  (Q46C77    ), RS27_METHJ  (Q2FPD4    ), 
RS27_METJA  (P54028    ), RS27_METKA  (Q8TY87    ), RS27_METMA  (P61932    ), 
RS27_METTH  (O27364    ), RS27_MOUSE  (Q6ZWU9    ), RS27_PONAB  (Q5RBK1    ), 
RS27_PYRAB  (Q9UXZ3    ), RS27_PYRAE  (Q8ZTY4    ), RS27_PYRAR  (A4WLR8    ), 
RS27_PYRCJ  (A3MUV2    ), RS27_PYRFU  (Q8U474    ), RS27_PYRHO  (P58078    ), 
RS27_PYRIL  (A1RRN0    ), RS27_PYRNV  (B1YAF9    ), RS27_RAT    (Q71TY3    ), 
RS27_SACS2  (Q97Z80    ), RS27_SCHPO  (O74330    ), RS27_SULAC  (Q4J9B1    ), 
RS27_SULTO  (Q973F9    ), RS27_THEAC  (Q9HIX2    ), RS27_THEGJ  (C5A6X9    ), 
RS27_THEKO  (Q5JE50    ), RS27_THEON  (B6YT34    ), RS27_THEVO  (Q97BP1    ), 
RS27_XENLA  (P47904    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 8 sequences 

RS27_CAEEL  (Q9TXP0    ), RS27_DICDI  (Q8T1V4    ), RS27_HALLT  (B9LML9    ), 

RS27_HALMA  (Q5UX21    ), RS27_METLZ  (A2ST12    ), RS27_METMJ  (A3CX76    ), 
RS27_METPE  (B8GGQ3    ), RS27_NATPD  (Q3ISI7    )
» more

PDB
[Detailed view]		 16 PDB

1QXF; 5A2Q; 5FLX; 5JB3; 5JBH; 5LL6; 5OA3; 6EML; 6FAI; 6G18; 6G4S; 6G4W; 6G51; 6G53; 6G5H; 6G5I
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission