PROSITE entry PS01182
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General information about the entry
| Entry name [info] | GLYCOSYL_HYDROL_F35 |
| Accession [info] | PS01182 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00910 |
Name and characterization of the entry
| Description [info] | Glycosyl hydrolases family 35 putative active site. |
| Pattern [info] |
G-G-P-[LIVM](2)-x(2)-Q-x-E-N-E-[FY]. |
Numerical results [info]
| Total number of hits | 64 in 64 different sequences |
| Number of true positive hits | 64 in 64 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 30 |
| Number of 'partial' sequences | 3 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 68.09 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Site [info] | active_site(?) at position 10 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
64 sequences
BGA10_ARATH (Q9FN08), BGA10_ORYSJ (Q67VU7), BGA11_ARATH (Q9SCV1), BGA11_ORYSJ (Q6ZJJ0), BGA12_ARATH (Q9SCV0), BGA12_ORYSJ (Q0IZZ8), BGA13_ARATH (Q9SCU9), BGA13_ORYSJ (Q7G3T8), BGA14_ARATH (Q9SCU8), BGA14_ORYSJ (Q7XFK2), BGA15_ARATH (Q9C6W4), BGA15_ORYSJ (Q0INM3), BGA16_ARATH (Q8GX69), BGA17_ARATH (Q93Z24), BGAL1_ARATH (Q9SCW1), BGAL1_DICDI (Q54GE1), BGAL1_ORYSJ (Q8RUV9), BGAL2_ARATH (Q9LFA6), BGAL2_DICDI (Q54MV6), BGAL2_ORYSJ (Q8W0A1), BGAL3_ARATH (Q9SCV9), BGAL4_ARATH (Q9SCV8), BGAL4_ORYSI (A2X2H7), BGAL4_ORYSJ (Q6Z6K4), BGAL5_ARATH (Q9MAJ7), BGAL5_ORYSJ (Q10RB4), BGAL6_ARATH (Q9FFN4), BGAL6_ORYSJ (Q10NX8), BGAL7_ARATH (Q9SCV5), BGAL7_ORYSJ (Q75HQ3), BGAL8_ARATH (Q9SCV4), BGAL8_ORYSJ (Q0DGD7), BGAL9_ARATH (Q9SCV3), BGAL9_ORYSJ (Q5Z7L0), BGALA_ASPFC (B0XMP7), BGALA_ASPFN (B8N6V7), BGALA_ASPFU (Q4WS33), BGALA_ASPNC (A2QAN3), BGALA_ASPOR (Q2UCU3), BGALA_ASPPH (Q4ZHV7), BGALA_NEOFI (A1D1Z9), BGALA_PENEN (B8QGZ3), BGALA_PENSQ (Q700S9), BGALE_ASPFC (B0XXE7), BGALE_ASPFU (Q4WG05), BGALE_NEOFI (A1DJ58), BGAL_ASPNG (P29853), BGAL_ASPOF (P45582), BGAL_BOVIN (Q58D55), BGAL_BRAOL (P49676), BGAL_CANLF (Q9TRY9), BGAL_DIACA (Q00662), BGAL_FELCA (O19015), BGAL_HUMAN (P16278), BGAL_MACFA (Q60HF6), BGAL_MALDO (P48981), BGAL_MOUSE (P23780), BGAL_PONAB (Q5R7P4), BGAL_SOLLC (P48980), BGAL_XANMN (P48982), GLBL2_HUMAN (Q8IW92), GLBL2_MOUSE (Q3UPY5), GLBL3_MOUSE (A2RSQ1), GLBL3_RAT (Q5XIL5)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
30 sequences
BGALA_EMENI (Q5BFC4), BGALB_ASPFC (B0XNY2), BGALB_ASPFN (B8NKI4), BGALB_ASPFU (Q4WRD3), BGALB_ASPNC (A2QA64), BGALB_ASPOR (Q2U6P1), BGALB_ASPTN (Q0CMF3), BGALB_BOTFB (A6RPN7), BGALB_EMENI (Q5BEQ0), BGALB_NEOFI (A1D199), BGALB_PENRW (B6GW04), BGALB_PYRTR (B2W791), BGALB_SCLS1 (A7EBU5), BGALB_TALMQ (B6QLF0), BGALC_ASPCL (A1CE56), BGALC_ASPFC (B0Y752), BGALC_ASPFN (B8N2I5), BGALC_ASPFU (Q4WNE4), BGALC_ASPNC (A2QL84), BGALC_ASPOR (Q2UMD5), BGALC_NEOFI (A1DM65), BGALC_PENRW (B6H5X9), BGALC_SCLS1 (A7EZS5), BGALC_TALMQ (B6QHA9), GLB1L_HUMAN (Q6UWU2), GLB1L_MACFA (Q95LV1), GLB1L_MOUSE (Q8VC60), GLBL3_HUMAN (Q8NCI6), GLMA_PYRHO (O58247), GLMA_THEKO (Q76HN4)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
3 sequences
BGAL_HORVU (P83252), BGAL_PHODC (P85412), BGAL_PINPS (P81669) |
| PDB [Detailed view] |
18 PDB
1TG7; 1XC6; 3THC; 3THD; 3WEZ; 3WF0; 3WF1; 3WF2; 3WF3; 3WF4; 4IUG; 5IFP; 5IFT; 5IHR; 5JUV; 5MGC; 5MGD; 7KDV » more |