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PROSITE entry PS01193


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General information about the entry

Entry name [info] RIBOSOMAL_S8E
Accession [info] PS01193
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00918

Name and characterization of the entry

Description [info] Ribosomal protein S8e signature.
Pattern [info]
[KR]-x(2)-[ST]-G-[GAR]-x(5,6)-[KRHSA]-x-[KRT]-x-[KR]-x-[EA]-[LIMPA]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 73 in 73 different sequences
Number of true positive hits 72 in 72 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 13
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 98.63 %
Recall (true positives / (true positives + false negatives)) 84.71 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
72 sequences

RS81_ARATH  (Q93VG5), RS82_ARATH  (Q9FIF3), RS8A_CANAL  (Q59T44), 
RS8A_SCHPO  (O14049), RS8A_YEAST  (P0CX39), RS8B_SCHPO  (Q9P7B2), 
RS8B_YEAST  (P0CX40), RS8E_AERPE  (Q9YDY0), RS8E_ARCFU  (O28130), 
RS8E_HALMA  (P49402), RS8E_HALS3  (B0R639), RS8E_HALSA  (Q9HPE9), 
RS8E_METAC  (Q8TS82), RS8E_METAR  (Q0W1L5), RS8E_METBF  (Q465V4), 
RS8E_METBU  (Q12UA1), RS8E_METHJ  (Q2FU12), RS8E_METJA  (P54055), 
RS8E_METKA  (Q8TV55), RS8E_METLZ  (A2STM4), RS8E_METM5  (A4G0R4), 
RS8E_METM6  (A9A907), RS8E_METM7  (A6VHS1), RS8E_METMA  (Q8PVC6), 
RS8E_METMP  (P61300), RS8E_METPE  (B8GJR4), RS8E_METS3  (A5UNB3), 
RS8E_METS5  (A4YD47), RS8E_METTH  (O26309), RS8E_METTP  (A0B8P7), 
RS8E_NANEQ  (P61301), RS8E_PICTO  (Q6L0D3), RS8E_PYRAB  (Q9UZL4), 
RS8E_PYRAE  (Q8ZTB8), RS8E_PYRAR  (A4WLM9), RS8E_PYRFU  (Q8U1Y5), 
RS8E_PYRHO  (O58830), RS8E_PYRNV  (B1Y9T9), RS8E_SACS2  (Q980W3), 
RS8E_STAMF  (A3DNX9), RS8E_SULAC  (Q4JAP5), RS8E_SULIA  (C3MZT9), 
RS8E_SULIK  (C4KJ22), RS8E_SULIL  (C3MJ42), RS8E_SULIM  (C3MYT4), 
RS8E_SULIN  (C3NF48), RS8E_SULIY  (C3N864), RS8E_SULTO  (Q976K3), 
RS8E_THEAC  (Q9HJD0), RS8E_THEGJ  (C5A4I6), RS8E_THEKO  (Q5JGF3), 
RS8E_THEON  (B6YTF2), RS8E_THEVO  (Q97BA2), RS8_APIME   (O76756), 
RS8_BOVIN   (Q5E958), RS8_CAEEL   (P48156), RS8_DANRE   (P62247), 
RS8_DROME   (Q8MLY8), RS8_HUMAN   (P62241), RS8_ICTPU   (Q90YR6), 
RS8_LEIMA   (P25204), RS8_MACFA   (Q4R6P8), RS8_MAIZE   (Q08069), 
RS8_MOUSE   (P62242), RS8_ORYSJ   (P49199), RS8_PRUAR   (O81361), 
RS8_RABIT   (G1TJW1), RS8_RAT (P62243), RS8_SPOFR   (Q8WQI5), 
RS8_THEAN   (Q4UFS9), RS8_THEPA   (Q4N3P0), RS8_XENLA   (Q7SYU0)
» more

UniProtKB/Swiss-Prot
False negative sequences
13 sequences

NSA2_SCHPO  (Q9UU79), RS8E_HALLT  (B9LQC4), RS8E_HALWD  (Q18F55), 
RS8E_HYPBU  (A2BK08), RS8E_IGNH4  (A8AAJ7), RS8E_META3  (A6UWP2), 
RS8E_METB6  (A7IAR0), RS8E_METMJ  (A3CSQ2), RS8E_METST  (Q2NEU6), 
RS8E_METVS  (A6UQT9), RS8E_PYRCJ  (A3MWY2), RS8E_PYRIL  (A1RS21), 
RS8_DICDI   (Q54E24)
» more

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

EFG_PARM1   (Q2W2I8)

		
PDB
[Detailed view]
354 PDB

2KCO; 3J6X; 3J6Y; 3J77; 3J78; 3JAG; 3JAH; 3JAI; 4D5L; 4D61; 4KZX; 4KZY; 4KZZ; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4N; 4V6U; 4V6W; 4V6X; 4V88; 4V8Y; 4V8Z; 4V92; 5A2Q; 5AJ0; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FLX; 5I4L; 5JB3; 5JBH; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5K0Y; 5LKS; 5LL6; 5LYB; 5LZS; 5LZT; 5LZU; 5LZV; 5LZW; 5LZZ; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OA3; 5OBM; 5ON6; 5T2C; 5TBW; 5TGA; 5TGM; 5TZS; 5VYC; 5WLC; 5WYJ; 5WYK; 6D90; 6D9J; 6EML; 6FAI; 6FEC; 6G18; 6G4S; 6G4W; 6G51; 6G53; 6G5H; 6G5I; 6GQ1; 6GQB; 6GQV; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6KE6; 6LQP; 6LQQ; 6LQR; 6LQS; 6LQT; 6LQU; 6LQV; 6MTD; 6MTE; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6P4G; 6P4H; 6Q8Y; 6QZP; 6R5Q; 6R6G; 6R6P; 6R7Q; 6RBD; 6RBE; 6S47; 6SGC; 6SKF; 6SKG; 6SNT; 6SV4; 6SW9; 6SWC; 6SWD; 6T4Q; 6T7I; 6T7T; 6T83; 6TH6; 6TNU; 6W2S; 6W2T; 6WDR; 6WOO; 6XA1; 6XU6; 6XU7; 6XU8; 6Y0G; 6Y2L; 6Y57; 6Y7C; 6YAL; 6YAM; 6YAN; 6YBW; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZCE; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZMW; 6ZN5; 6ZOJ; 6ZOK; 6ZON; 6ZP4; 6ZQB; 6ZQC; 6ZQD; 6ZQE; 6ZQF; 6ZQG; 6ZU9; 6ZUO; 6ZV6; 6ZVH; 6ZVI; 6ZVJ; 6ZVK; 6ZXD; 6ZXE; 6ZXF; 6ZXG; 6ZXH; 7A01; 7A09; 7A1G; 7AJT; 7AJU; 7B7D; 7CPU; 7CPV; 7D4I; 7D5T; 7D63; 7JQB; 7JQC; 7K5I; 7LS1; 7LS2; 7MDZ; 7MPI; 7MPJ; 7MQ8; 7MQ9; 7MQA; 7N8B; 7NRC; 7NRD; 7NWG; 7NWI; 7O7Y; 7O7Z; 7O80; 7O81; 7OYA; 7OYB; 7OYD; 7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QGG; 7QP6; 7QP7; 7QVP; 7R4X; 7SUK; 7SYG; 7SYH; 7SYI; 7SYJ; 7SYK; 7SYL; 7SYM; 7SYN; 7SYO; 7SYP; 7SYQ; 7SYR; 7SYS; 7SYT; 7SYU; 7SYV; 7SYW; 7SYX; 7TOQ; 7TOR; 7TQL; 7UCJ; 7UCK; 7WTL; 7WTM; 7WTN; 7WTO; 7WTP; 7WTQ; 7WTR; 7WTS; 7WTT; 7WTU; 7WTV; 7WTW; 7WTX; 7WTZ; 7WU0; 7XNX; 7XNY; 7ZAG; 7ZAH; 7ZAI; 7ZHG; 7ZJW; 7ZJX; 7ZPQ; 7ZRS; 7ZUW; 7ZUX; 7ZW0; 8A3W; 8A98; 8BHF; 8BQD; 8BQX; 8BTK; 8C00; 8C01; 8C83; 8CAH; 8CAS; 8CBJ; 8CCS; 8CDL; 8CDR; 8CEH; 8CF5; 8CG8; 8CGN; 8CIV; 8CKU; 8CMJ; 8EUB; 8EVP; 8EVQ; 8EVR; 8EVS; 8EVT; 8EWB; 8EWC; 8G5Y; 8G5Z; 8G60; 8G61; 8G6J; 8GLP; 8HKX; 8HKY; 8HKZ; 8HL1; 8HL2; 8HL3; 8HL4; 8HL5; 8IFD; 8IFE; 8JDJ; 8JDK; 8JDL; 8JDM; 8OZ0; 8P2K; 8PPK; 8PPL; 8SCB; 8T4S; 8Y0U; 8Y0W; 8Y0X
» more