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Entry: PS01193

General information about the entry

Entry name [info] RIBOSOMAL_S8E
Accession [info] PS01193
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00918

Name and characterization of the entry

Description [info] Ribosomal protein S8e signature.
Pattern [info]
[KR]-x(2)-[ST]-G-[GAR]-x(5,6)-[KRHSA]-x-[KRT]-x-[KR]-x-[EA]-[LIMPA]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 71 in 71 different sequences
Number of true positive hits 70 in 70 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 13
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 98.59 %
Recall (true positives / (true positives + false negatives)) 84.34 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
70 sequences

RS81_ARATH  (Q93VG5    ), RS82_ARATH  (Q9FIF3    ), RS8A_SCHPO  (O14049    ), 
RS8A_YEAST  (P0CX39    ), RS8B_SCHPO  (Q9P7B2    ), RS8B_YEAST  (P0CX40    ), 
RS8E_AERPE  (Q9YDY0    ), RS8E_ARCFU  (O28130    ), RS8E_HALMA  (P49402    ), 
RS8E_HALS3  (B0R639    ), RS8E_HALSA  (Q9HPE9    ), RS8E_METAC  (Q8TS82    ), 
RS8E_METAR  (Q0W1L5    ), RS8E_METBF  (Q465V4    ), RS8E_METBU  (Q12UA1    ), 
RS8E_METHJ  (Q2FU12    ), RS8E_METJA  (P54055    ), RS8E_METKA  (Q8TV55    ), 
RS8E_METLZ  (A2STM4    ), RS8E_METM5  (A4G0R4    ), RS8E_METM6  (A9A907    ), 
RS8E_METM7  (A6VHS1    ), RS8E_METMA  (Q8PVC6    ), RS8E_METMP  (P61300    ), 
RS8E_METPE  (B8GJR4    ), RS8E_METS3  (A5UNB3    ), RS8E_METS5  (A4YD47    ), 
RS8E_METTH  (O26309    ), RS8E_METTP  (A0B8P7    ), RS8E_NANEQ  (P61301    ), 
RS8E_PICTO  (Q6L0D3    ), RS8E_PYRAB  (Q9UZL4    ), RS8E_PYRAE  (Q8ZTB8    ), 
RS8E_PYRAR  (A4WLM9    ), RS8E_PYRFU  (Q8U1Y5    ), RS8E_PYRHO  (O58830    ), 
RS8E_PYRNV  (B1Y9T9    ), RS8E_SACS2  (Q980W3    ), RS8E_STAMF  (A3DNX9    ), 
RS8E_SULAC  (Q4JAP5    ), RS8E_SULIA  (C3MZT9    ), RS8E_SULIK  (C4KJ22    ), 
RS8E_SULIL  (C3MJ42    ), RS8E_SULIM  (C3MYT4    ), RS8E_SULIN  (C3NF48    ), 
RS8E_SULIY  (C3N864    ), RS8E_SULTO  (Q976K3    ), RS8E_THEAC  (Q9HJD0    ), 
RS8E_THEGJ  (C5A4I6    ), RS8E_THEKO  (Q5JGF3    ), RS8E_THEON  (B6YTF2    ), 
RS8E_THEVO  (Q97BA2    ), RS8_APIME   (O76756    ), RS8_BOVIN   (Q5E958    ), 
RS8_CAEEL   (P48156    ), RS8_DANRE   (P62247    ), RS8_DROME   (Q8MLY8    ), 
RS8_HUMAN   (P62241    ), RS8_ICTPU   (Q90YR6    ), RS8_LEIMA   (P25204    ), 
RS8_MACFA   (Q4R6P8    ), RS8_MAIZE   (Q08069    ), RS8_MOUSE   (P62242    ), 
RS8_ORYSJ   (P49199    ), RS8_PRUAR   (O81361    ), RS8_RAT     (P62243    ), 
RS8_SPOFR   (Q8WQI5    ), RS8_THEAN   (Q4UFS9    ), RS8_THEPA   (Q4N3P0    ), 
RS8_XENLA   (Q7SYU0    )
» more

UniProtKB/Swiss-Prot
False negative sequences
13 sequences

NSA2_SCHPO  (Q9UU79    ), RS8E_HALLT  (B9LQC4    ), RS8E_HALWD  (Q18F55    ), 
RS8E_HYPBU  (A2BK08    ), RS8E_IGNH4  (A8AAJ7    ), RS8E_META3  (A6UWP2    ), 
RS8E_METB6  (A7IAR0    ), RS8E_METMJ  (A3CSQ2    ), RS8E_METST  (Q2NEU6    ), 
RS8E_METVS  (A6UQT9    ), RS8E_PYRCJ  (A3MWY2    ), RS8E_PYRIL  (A1RS21    ), 
RS8_DICDI   (Q54E24    )
» more

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

EFG_MAGSA   (Q2W2I8    )

		
PDB
[Detailed view]
113 PDB

2KCO; 3J6X; 3J6Y; 3J77; 3J78; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4N; 4V6U; 4V6W; 4V6X; 4V88; 4V8Y; 4V8Z; 4V92; 5A2Q; 5AJ0; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FLX; 5I4L; 5JB3; 5JBH; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LL6; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OA3; 5OBM; 5ON6; 5T2C; 5TBW; 5TGA; 5TZS; 5VYC; 5WLC; 5WYJ; 5WYK; 6EK0; 6EML; 6FAI; 6FEC; 6G18; 6G4S; 6G4W; 6G51; 6G53; 6G5H; 6G5I; 6GQ1; 6GQB; 6GQV; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QZP; 6RBD; 6RBE; 6S47; 6SNT; 6SV4; 6SW9; 6SWC; 6SWD; 6T4Q; 6T7I; 6T7T; 6T83; 6Y0G; 6Y2L; 6Y57; 6Y7C
» more

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