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Entry: PS01208

General information about the entry

Entry name [info] VWFC_1
Accession [info] PS01208
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE;
22-FEB-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00928

Name and characterization of the entry

Description [info] VWFC domain signature.
Pattern [info] 
C-x(2,3)-C-{CG}-C-x(6,14)-C-x(3,4)-C-x(2,10)-C-x(9,16)-C-C-x(2,4)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_01 which contains 569'213 sequence entries.


Total number of hits 279 in 144 different sequences
Number of true positive hits 249 in 120 different sequences
Number of 'unknown' hits 1
Number of false positive hits 29 in 23 different sequences
Number of false negative sequences 20
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 89.57 %
Recall (true positives / (true positives + false negatives)) 92.57 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 20
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 120 sequences 

BMPER_HUMAN (Q8N8U9    ), BMPER_MOUSE (Q8CJ69    ), CCN1_CHICK  (P19336    ), 

CCN1_HUMAN  (O00622    ), CCN1_MOUSE  (P18406    ), CCN1_PANTR  (A5A6L1    ), 
CCN1_RAT    (Q9ES72    ), CCN2_BOVIN  (O18739    ), CCN2_HUMAN  (P29279    ), 
CCN2_MOUSE  (P29268    ), CCN2_PIG    (O19113    ), CCN2_RAT    (Q9R1E9    ), 
CCN3_CHICK  (P28686    ), CCN3_COTJA  (P42642    ), CCN3_HUMAN  (P48745    ), 
CCN3_MOUSE  (Q64299    ), CCN3_RAT    (Q9QZQ5    ), CCN3_XENLA  (P51609    ), 
CCN4_HUMAN  (O95388    ), CCN4_MOUSE  (O54775    ), CCN4_RAT    (Q99PP0    ), 
CCN5_HUMAN  (O76076    ), CCN5_MOUSE  (Q9Z0G4    ), CCN5_RAT    (Q9JHC6    ), 
CHRD_DANRE  (O57472    ), CHRD_HUMAN  (Q9H2X0    ), CHRD_MOUSE  (Q9Z0E2    ), 
CHRD_RAT    (Q63148    ), CHRD_XENLA  (Q91713    ), CO1A1_BOVIN (P02453    ), 
CO1A1_CANLF (Q9XSJ7    ), CO1A1_CHICK (P02457    ), CO1A1_CYNPY (Q9YIB4    ), 
CO1A1_HUMAN (P02452    ), CO1A1_MOUSE (P11087    ), CO1A1_RAT   (P02454    ), 
CO2A1_BOVIN (P02459    ), CO2A1_HUMAN (P02458    ), CO2A1_MOUSE (P28481    ), 
CO2A1_XENLA (Q91717    ), CO2A1_XENTR (Q6P4Z2    ), CO3A1_CHICK (P12105    ), 
CO3A1_HUMAN (P02461    ), CO3A1_MOUSE (P08121    ), CO3A1_RAT   (P13941    ), 
CO5A2_HUMAN (P05997    ), CO5A2_MOUSE (Q3U962    ), CRDL1_CHICK (Q90ZD5    ), 
CRDL1_HUMAN (Q9BU40    ), CRDL1_MOUSE (Q920C1    ), CRDL1_RAT   (Q76LD0    ), 
CRDL2_HUMAN (Q6WN34    ), CRDL2_MOUSE (Q8VEA6    ), CRIM1_CHICK (Q8AWW5    ), 
CRIM1_DANRE (Q7T3Q2    ), CRIM1_HUMAN (Q9NZV1    ), CRIM1_MOUSE (Q9JLL0    ), 
ECM2_BOVIN  (Q3MHH9    ), ECM2_HUMAN  (O94769    ), ECM2_MOUSE  (Q5FW85    ), 
FRAS1_HUMAN (Q86XX4    ), FRAS1_MOUSE (Q80T14    ), IDD_HUMAN   (P98153    ), 
IDD_MOUSE   (P98154    ), KCP_HUMAN   (Q6ZWJ8    ), KCP_MOUSE   (Q3U492    ), 
KCP_XENLA   (Q9IBG7    ), MUC19_BOVIN (P98091    ), MUC19_MOUSE (Q6PZE0    ), 
MUC2L_RAT   (P98089    ), MUC2_HUMAN  (Q02817    ), MUC2_MOUSE  (Q80Z19    ), 
MUC5A_HUMAN (P98088    ), MUC5B_CHICK (Q98UI9    ), MUC5B_HUMAN (Q9HC84    ), 
MUCAP_PIG   (P12021    ), MUCB1_XENLA (P38565    ), NELL1_HUMAN (Q92832    ), 
NELL1_MOUSE (Q2VWQ2    ), NELL1_RAT   (Q62919    ), NELL2_BOVIN (A6QR11    ), 
NELL2_DANRE (A1A5Y0    ), NELL2_HUMAN (Q99435    ), NELL2_MOUSE (Q61220    ), 
NELL2_PONAB (Q5R3Z7    ), NELL2_RAT   (Q62918    ), NELL2_XENLA (Q7ZXL5    ), 
NELL2_XENTR (A2VCU8    ), NEL_CHICK   (Q90827    ), PXDNL_HUMAN (A1KZ92    ), 
PXDN_DROME  (Q9VZZ4    ), PXDN_HUMAN  (Q92626    ), PXDN_MOUSE  (Q3UQ28    ), 
PXDN_XENTR  (A4IGL7    ), SAS_DROME   (Q04164    ), SOG_DROME   (Q24025    ), 
SSPO_BOVIN  (P98167    ), SSPO_CHICK  (Q2PC93    ), SSPO_HUMAN  (A2VEC9    ), 
SSPO_MOUSE  (Q8CG65    ), SSPO_RAT    (Q700K0    ), TSP1_BOVIN  (Q28178    ), 
TSP1_HUMAN  (P07996    ), TSP1_MOUSE  (P35441    ), TSP1_XENLA  (P35448    ), 
TSP2_BOVIN  (Q95116    ), TSP2_CHICK  (P35440    ), TSP2_HUMAN  (P35442    ), 
TSP2_MOUSE  (Q03350    ), VWC2L_DANRE (B0UZC8    ), VWC2L_HUMAN (B2RUY7    ), 
VWC2L_MOUSE (Q505H4    ), VWC2_HUMAN  (Q2TAL6    ), VWC2_MOUSE  (Q8C8N3    ), 
VWCE_HUMAN  (Q96DN2    ), VWCE_MOUSE  (Q3U515    ), VWF_CANLF   (Q28295    ), 
VWF_HUMAN   (P04275    ), VWF_MOUSE   (Q8CIZ8    ), VWF_PIG     (Q28833    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 20 sequences 

AMNLS_CANLF (Q6UKI2    ), AMNLS_HUMAN (Q9BXJ7    ), AMNLS_MOUSE (Q99JB7    ), 

AMNLS_PIG   (F1SAM7    ), FSTL1_BOVIN (Q58D84    ), FSTL1_HUMAN (Q12841    ), 
FSTL1_MACFA (Q9GKY0    ), FSTL1_MOUSE (Q62356    ), FSTL1_PONAB (Q5R9Y1    ), 
FSTL1_RAT   (Q62632    ), HMCT_BOMMO  (P98092    ), JAG1B_DANRE (Q90Y54    ), 
JAG2_HUMAN  (Q9Y219    ), MUC19_HUMAN (Q7Z5P9    ), MUC2_RAT    (Q62635    ), 
VWC2L_MACFA (Q95K75    ), ZAN_HUMAN   (Q9Y493    ), ZAN_MOUSE   (O88799    ), 
ZAN_PIG     (Q28983    ), ZAN_RABIT   (P57999    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 4 sequences 

CO1A1_RABIT (P02456    ), CO2A1_CHICK (P02460    ), CO3A1_BOVIN (P04258    ), 

VWF_BOVIN   (P80012    )
» more

UniProtKB/Swiss-Prot
'Unknown' sequences		 1 sequence 

SCGR7_HUMAN (A0A286YF01)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			23 sequences
			


			
GG3_ARATH   (Q6AWT8    ), KR510_HUMAN (Q6L8G5    ), KRA51_HUMAN (Q6L8H4    ), 

			
KRA51_MOUSE (Q64507    ), KRA53_HUMAN (Q6L8H2    ), KRA54_HUMAN (Q6L8H1    ), 
KRA56_HUMAN (Q6L8G9    ), KRA57_HUMAN (Q6L8G8    ), KRA58_HUMAN (O75690    ), 
KRA59_HUMAN (P26371    ), KRUC_SHEEP  (P26372    ), MCSP_MOUSE  (P15265    ), 
MCSP_RAT    (Q64298    ), MTCU_CALSI  (Q9U620    ), MT_CARMA    (P55948    ), 
SCGR1_HUMAN (A0A286YEY9), SCGR2_HUMAN (A0A286YFB4), SCGR3_HUMAN (A0A286YF60), 
SCGR4_HUMAN (A0A286YEV6), SCGR5_HUMAN (A0A286YF46), SCGR6_HUMAN (A0A286YF77), 
SCGR8_HUMAN (A0A286YFG1), SCGR9_HUMAN (P0DSO2    )


			
			» more
			


				
	

	

		PDB
[Detailed view]		
		
			3 PDB
			


			1U5M; 5NB8; 5NIR
				
	





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