PROSITE entry PS01208
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General information about the entry
| Entry name [info] | VWFC_1 |
| Accession [info] | PS01208 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00928 |
Name and characterization of the entry
| Description [info] | VWFC domain signature. |
| Pattern [info] |
C-x(2,3)-C-{CG}-C-x(6,14)-C-x(3,4)-C-x(2,10)-C-x(9,16)-C-C-x(2,4)-C.
|
Numerical results [info]
| Total number of hits | 285 in 145 different sequences |
| Number of true positive hits | 249 in 120 different sequences |
| Number of 'unknown' hits | 1 |
| Number of false positive hits | 35 in 24 different sequences |
| Number of false negative sequences | 20 |
| Number of 'partial' sequences | 4 |
| Precision (true positives / (true positives + false positives)) | 87.68 % |
| Recall (true positives / (true positives + false negatives)) | 92.57 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 20 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
120 sequences
BMPER_HUMAN (Q8N8U9), BMPER_MOUSE (Q8CJ69), CCN1_CHICK (P19336), CCN1_HUMAN (O00622), CCN1_MOUSE (P18406), CCN1_PANTR (A5A6L1), CCN1_RAT(Q9ES72), CCN2_BOVIN (O18739), CCN2_HUMAN (P29279), CCN2_MOUSE (P29268), CCN2_PIG(O19113), CCN2_RAT(Q9R1E9), CCN3_CHICK (P28686), CCN3_COTJA (P42642), CCN3_HUMAN (P48745), CCN3_MOUSE (Q64299), CCN3_RAT(Q9QZQ5), CCN3_XENLA (P51609), CCN4_HUMAN (O95388), CCN4_MOUSE (O54775), CCN4_RAT(Q99PP0), CCN5_HUMAN (O76076), CCN5_MOUSE (Q9Z0G4), CCN5_RAT(Q9JHC6), CHRD_DANRE (O57472), CHRD_HUMAN (Q9H2X0), CHRD_MOUSE (Q9Z0E2), CHRD_RAT(Q63148), CHRD_XENLA (Q91713), CO1A1_BOVIN (P02453), CO1A1_CANLF (Q9XSJ7), CO1A1_CHICK (P02457), CO1A1_CYNPY (Q9YIB4), CO1A1_HUMAN (P02452), CO1A1_MOUSE (P11087), CO1A1_RAT (P02454), CO2A1_BOVIN (P02459), CO2A1_HUMAN (P02458), CO2A1_MOUSE (P28481), CO2A1_XENLA (Q91717), CO2A1_XENTR (Q6P4Z2), CO3A1_CHICK (P12105), CO3A1_HUMAN (P02461), CO3A1_MOUSE (P08121), CO3A1_RAT (P13941), CO5A2_HUMAN (P05997), CO5A2_MOUSE (Q3U962), CRDL1_CHICK (Q90ZD5), CRDL1_HUMAN (Q9BU40), CRDL1_MOUSE (Q920C1), CRDL1_RAT (Q76LD0), CRDL2_HUMAN (Q6WN34), CRDL2_MOUSE (Q8VEA6), CRIM1_CHICK (Q8AWW5), CRIM1_DANRE (Q7T3Q2), CRIM1_HUMAN (Q9NZV1), CRIM1_MOUSE (Q9JLL0), ECM2_BOVIN (Q3MHH9), ECM2_HUMAN (O94769), ECM2_MOUSE (Q5FW85), FRAS1_HUMAN (Q86XX4), FRAS1_MOUSE (Q80T14), IDD_HUMAN (P98153), IDD_MOUSE (P98154), KCP_HUMAN (Q6ZWJ8), KCP_MOUSE (Q3U492), KCP_XENLA (Q9IBG7), MUC19_BOVIN (P98091), MUC19_MOUSE (Q6PZE0), MUC2L_RAT (P98089), MUC2_HUMAN (Q02817), MUC2_MOUSE (Q80Z19), MUC5A_HUMAN (P98088), MUC5B_CHICK (Q98UI9), MUC5B_HUMAN (Q9HC84), MUCAP_PIG (P12021), MUCB1_XENLA (P38565), NELL1_HUMAN (Q92832), NELL1_MOUSE (Q2VWQ2), NELL1_RAT (Q62919), NELL2_BOVIN (A6QR11), NELL2_DANRE (A1A5Y0), NELL2_HUMAN (Q99435), NELL2_MOUSE (Q61220), NELL2_PONAB (Q5R3Z7), NELL2_RAT (Q62918), NELL2_XENLA (Q7ZXL5), NELL2_XENTR (A2VCU8), NEL_CHICK (Q90827), PXDNL_HUMAN (A1KZ92), PXDN_DROME (Q9VZZ4), PXDN_HUMAN (Q92626), PXDN_MOUSE (Q3UQ28), PXDN_XENTR (A4IGL7), SAS_DROME (Q04164), SOG_DROME (Q24025), SSPO_BOVIN (P98167), SSPO_CHICK (Q2PC93), SSPO_HUMAN (A2VEC9), SSPO_MOUSE (Q8CG65), SSPO_RAT(Q700K0), TSP1_BOVIN (Q28178), TSP1_HUMAN (P07996), TSP1_MOUSE (P35441), TSP1_XENLA (P35448), TSP2_BOVIN (Q95116), TSP2_CHICK (P35440), TSP2_HUMAN (P35442), TSP2_MOUSE (Q03350), VWC2L_DANRE (B0UZC8), VWC2L_HUMAN (B2RUY7), VWC2L_MOUSE (Q505H4), VWC2_HUMAN (Q2TAL6), VWC2_MOUSE (Q8C8N3), VWCE_HUMAN (Q96DN2), VWCE_MOUSE (Q3U515), VWF_CANLF (Q28295), VWF_HUMAN (P04275), VWF_MOUSE (Q8CIZ8), VWF_PIG (Q28833)» more
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| UniProtKB/Swiss-Prot False negative sequences |
20 sequences
AMNLS_CANLF (Q6UKI2), AMNLS_HUMAN (Q9BXJ7), AMNLS_MOUSE (Q99JB7), AMNLS_PIG (F1SAM7), FSTL1_BOVIN (Q58D84), FSTL1_HUMAN (Q12841), FSTL1_MACFA (Q9GKY0), FSTL1_MOUSE (Q62356), FSTL1_PONAB (Q5R9Y1), FSTL1_RAT (Q62632), HMCT_BOMMO (P98092), JAG1B_DANRE (Q90Y54), JAG2_HUMAN (Q9Y219), MUC19_HUMAN (Q7Z5P9), MUC2_RAT(Q62635), VWC2L_MACFA (Q95K75), ZAN_HUMAN (Q9Y493), ZAN_MOUSE (O88799), ZAN_PIG (Q28983), ZAN_RABIT (P57999)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
4 sequences
CO1A1_RABIT (P02456), CO2A1_CHICK (P02460), CO3A1_BOVIN (P04258), VWF_BOVIN (P80012)» more |
| UniProtKB/Swiss-Prot 'Unknown' sequences |
1 sequence
SCGR7_HUMAN (A0A286YF01) |
| UniProtKB/Swiss-Prot False positive sequences |
24 sequences
DEP1_ORYSJ (Q67UU9), GG3_ARATH (Q6AWT8), KR510_HUMAN (Q6L8G5), KRA51_HUMAN (Q6L8H4), KRA51_MOUSE (Q64507), KRA53_HUMAN (Q6L8H2), KRA54_HUMAN (Q6L8H1), KRA56_HUMAN (Q6L8G9), KRA57_HUMAN (Q6L8G8), KRA58_HUMAN (O75690), KRA59_HUMAN (P26371), KRUC_SHEEP (P26372), MCSP_MOUSE (P15265), MCSP_RAT(Q64298), MTCU_CALSI (Q9U620), MT_CARMA(P55948), SCGR1_HUMAN (A0A286YEY9), SCGR2_HUMAN (A0A286YFB4), SCGR3_HUMAN (A0A286YF60), SCGR4_HUMAN (A0A286YEV6), SCGR5_HUMAN (A0A286YF46), SCGR6_HUMAN (A0A286YF77), SCGR8_HUMAN (A0A286YFG1), SCGR9_HUMAN (P0DSO2)» more |
| PDB [Detailed view] |
5 PDB
1U5M; 5NB8; 5NIR; 7QCL; 7QCU |