PROSITE entry PS01214

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General information about the entry

Entry name [info]	UPF0016
Accession [info]	PS01214
Entry type [info]	PATTERN
Date [info]	01-NOV-1997 CREATED; 01-NOV-1997 DATA UPDATE; 08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00934

Name and characterization of the entry

Description [info]	Uncharacterized protein family UPF0016 signature.
Pattern [info]	E-[LIVM]-G-D-K-T-F-[LIVMF](2)-A.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.

Total number of hits	9 in 9 different sequences
Number of true positive hits	9 in 9 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	12
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	42.86 %

Comments [info]

Taxonomic range [info]	Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

9 sequences

GDT12_ORYSJ (Q2R2Z4), GDT1_YEAST  (P38301), PA71H_ARATH (Q9T0H9),

PAM71_ARATH (Q94AX5), TM165_HUMAN (Q9HC07), TM165_MOUSE (P52875), 
TM165_RAT   (Q4V899), Y615_SYNY3  (P52876), YD68_SCHPO  (Q10320)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
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Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

12 sequences

GDT11_ORYSI (B8AAM2), GDT11_ORYSJ (Q5NAY7), GDT13_ARATH (Q93Y38),

GDT13_ORYSI (A2ZE50), GDT13_ORYSJ (Q2R4J1), GDT14_ARATH (Q9C6M1), 
GDT14_ORYSI (A2YXC7), GDT14_ORYSJ (Q6ZIB9), GDT15_ARATH (Q9SX28), 
GDT15_ORYSJ (B9G125), MNEA_VIBC3  (A0A0H3AJF5), YLY5_SCHPO  (Q9P7Q0)

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