PROSITE entry PS01216
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PURL: https://purl.expasy.org/prosite/signature/PS01216
Direct ScanProsite submission
General information about the entry
| Entry name [info] | SUCCINYL_COA_LIG_1 |
| Accession [info] | PS01216 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00335 |
Name and characterization of the entry
| Description [info] | ATP-citrate lyase / succinyl-CoA ligases family signature 1. |
| Pattern [info] |
S-[KR]-S-G-[GT]-[LIVM]-[GST]-x-[EQ]-x(8,10)-G-x(4)-[LIVM]-[GA]-[LIVM]-G- G-D. |
Numerical results [info]
| Total number of hits | 64 in 64 different sequences |
| Number of true positive hits | 64 in 64 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 10 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 86.49 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
64 sequences
ACL1_NEUCR (Q8X097), ACL1_SCHPO (Q9P7W3), ACL1_SORMK (O93988), ACLB1_ARATH (Q9C522), ACLB1_ORYSJ (Q93VT8), ACLB2_ARATH (Q9FGX1), ACLY_BOVIN (Q32PF2), ACLY_CAEEL (P53585), ACLY_DICDI (Q54YA0), ACLY_HUMAN (P53396), ACLY_MOUSE (Q91V92), ACLY_RAT(P16638), ACLY_SHEEP (Q2TCH3), MTKB_METEA (P53595), SUCA1_ARATH (P68209), SUCA1_SOLLC (Q8GTQ9), SUCA1_TRIVA (P53399), SUCA2_ARATH (Q8LAD2), SUCA2_SOLLC (Q6DQL1), SUCA2_TRIVA (P53400), SUCA3_TRIVA (P53401), SUCA_BLAHN (B3FHT4), SUCA_BOVIN (Q58DR8), SUCA_CAEEL (P53596), SUCA_COLLI (Q9YGD2), SUCA_DICDI (P36967), SUCA_DROME (Q94522), SUCA_HUMAN (P53597), SUCA_MOUSE (Q9WUM5), SUCA_NEUCR (Q9P727), SUCA_ORYSJ (Q6ZL94), SUCA_PIG(O19069), SUCA_RAT(P13086), SUCA_SCHPO (O13750), SUCA_YEAST (P53598), SUCD1_ARCFU (O28733), SUCD2_ARCFU (O28098), SUCD_AQUAE (O67547), SUCD_BACSU (P80865), SUCD_COXBU (P53591), SUCD_ECO57 (P0AGF1), SUCD_ECOL6 (P0AGF0), SUCD_ECOLI (P0AGE9), SUCD_HAEIN (P45102), SUCD_METJA (Q58643), SUCD_METTH (O26663), SUCD_MYCBO (Q7U0Z0), SUCD_MYCTO (P9WGC6), SUCD_MYCTU (P9WGC7), SUCD_PSEAE (Q51567), SUCD_RICBR (Q1RH56), SUCD_RICCN (Q92I22), SUCD_RICFE (Q4ULQ8), SUCD_RICPR (O08371), SUCD_RICTY (Q9AKE1), SUCD_STAAC (Q5HGI6), SUCD_STAAM (P66866), SUCD_STAAN (P99070), SUCD_STAAR (Q6GHI9), SUCD_STAAS (Q6G9W7), SUCD_STAAW (Q8NX01), SUCD_STAEQ (Q5HPU4), SUCD_STAES (Q8CPH4), SUCD_THETH (P09143)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
10 sequences
ACL2_SCHPO (O13907), ACLA1_ARATH (Q9SGY2), ACLA1_ORYSJ (Q53JY8), ACLA2_ARATH (O22718), ACLA2_ORYSJ (Q2QZ86), ACLA3_ARATH (O80526), ACLA3_ORYSJ (Q2QNG7), SAUD_BILW3 (E5Y8P7), SQWL_ACHSX (A0A3A6N9V6), SUCB_SOLLC (Q84LB6)» more |
| PDB [Detailed view] |
65 PDB
pdb_00001cqi; pdb_00001cqj; pdb_00001euc; pdb_00001eud; pdb_00001jkj; pdb_00001jll; pdb_00001oi7; pdb_00001scu; pdb_00002fp4; pdb_00002fpg; pdb_00002fpi; pdb_00002fpp; pdb_00002nu6; pdb_00002nu7; pdb_00002nu8; pdb_00002nu9; pdb_00002nua; pdb_00002scu; pdb_00002yv1; pdb_00003mwd; pdb_00003mwe; pdb_00003pff; pdb_00003ufx; pdb_00004xx0; pdb_00005cae; pdb_00005tde; pdb_00005tdf; pdb_00005tdm; pdb_00005tdz; pdb_00005te1; pdb_00005teq; pdb_00005tes; pdb_00005tet; pdb_00006g4q; pdb_00006hxh; pdb_00006o0h; pdb_00006poe; pdb_00006pof; pdb_00006qfb; pdb_00006ui9; pdb_00006uia; pdb_00006uuw; pdb_00006uuz; pdb_00006uv5; pdb_00006wcv; pdb_00006xru; pdb_00007jfp; pdb_00007jj0; pdb_00007jkr; pdb_00007jmk; pdb_00007liw; pdb_00007lj9; pdb_00007lla; pdb_00007msr; pdb_00007mss; pdb_00007mst; pdb_00007rig; pdb_00007rkz; pdb_00007rmp; pdb_00008g1e; pdb_00008g1f; pdb_00008g5c; pdb_00008g5d; pdb_00008z02; pdb_00008z03 » more |