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PROSITE entry PS01222


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General information about the entry

Entry name [info] PMP22_2
Accession [info] PS01222
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00939

Name and characterization of the entry

Description [info] PMP-22 / EMP / MP20 family signature 2.
Pattern [info] 
[RQ]-[AVS]-x-[MC]-[IV]-L-[SA]-x-[LI]-x(4)-[GSA]-[LIVMF]-[LIVMFS]-[LIVMF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 26 in 26 different sequences
Number of true positive hits 26 in 26 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 70.27 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 26 sequences 

EMP1_HUMAN  (P54849), EMP1_MOUSE  (P47801), EMP1_PONAB  (Q5RCY3), 

EMP1_RABIT  (P54850), EMP1_RAT(P54848), EMP2_BOVIN  (Q2NKU9), 
EMP2_DANRE  (F1QIK8), EMP2_HUMAN  (P54851), EMP2_MOUSE  (O88662), 
EMP2_PANTR  (A5A6N6), EMP2_RAT(Q66HH2), EMP3_BOVIN  (Q58DR6), 
EMP3_HUMAN  (P54852), EMP3_MOUSE  (O35912), EMP3_RAT(Q9QYW5), 
LMIP_BOVIN  (P20274), LMIP_HUMAN  (P55344), LMIP_MOUSE  (P56563), 
LMIP_RAT(P54825), NKG7_MOUSE  (Q99PA5), PMP22_BOVIN (Q9TQZ3), 
PMP22_HORSE (Q6WL85), PMP22_HUMAN (Q01453), PMP22_MOUSE (P16646), 
PMP22_PONAB (Q5RAZ3), PMP22_RAT   (P25094)
» more

UniProtKB/Swiss-Prot
False negative sequences		 11 sequences 

CCGL_HUMAN  (Q8WXS4), CCGL_MOUSE  (Q9JJV3), CCGL_RAT(Q8VHW1), 

CLDN2_HUMAN (Q8NHS1), CLDN2_MOUSE (Q9D9H2), NKG7_BOVIN  (Q2KJ11), 
NKG7_HUMAN  (Q16617), TM114_HUMAN (B3SHH9), TM114_MOUSE (Q9D563), 
TM235_HUMAN (A6NFC5), TM235_MOUSE (B1AQL3)
» more