PROSITE entry PS01235
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General information about the entry
| Entry name [info] | PDXS_SNZ_1 |
| Accession [info] | PS01235 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00949 |
Name and characterization of the entry
| Description [info] | PdxS/SNZ family signature. |
| Pattern [info] |
[LV]-P-[VI]-[VTPI]-[NQLHT]-[FL]-[ATVS]-[AS]-G-G-[LIV]-[AT]-T-P-[AQS]-D- [AGVS]-[AS]-[LM]. |
Numerical results [info]
| Total number of hits | 206 in 206 different sequences |
| Number of true positive hits | 206 in 206 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 4 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 98.10 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
206 sequences
PDX11_ARATH (O80448), PDX11_ORYSJ (Q69LA6), PDX12_ARATH (Q9ZNR6), PDX12_ORYSJ (Q8W3D0), PDX13_ARATH (Q8L940), PDX1_CERNC (O59905), PDX1_DICDI (Q54J47), PDX1_EMENI (Q9UW83), PDX1_GINBI (Q9AT63), PDX1_HEVBR (Q39963), PDX1_NEUCR (Q9C1K6), PDX1_PHAVU (Q9FT25), PDX1_PLABE (P0DMS0), PDX1_PLAF7 (C6KT50), PDX1_SCHPO (O14027), PDX1_STELP (Q41348), PDX1_SUBDO (Q8WPW2), PDXS_ACTP2 (A3MZT8), PDXS_ACTP7 (B3GXB6), PDXS_ACTPJ (B0BUD0), PDXS_AERPE (Q9YFK2), PDXS_ANOFW (B7GFL8), PDXS_ARCFU (O29742), PDXS_BACAA (C3P8Q3), PDXS_BACAC (C3LIY7), PDXS_BACAN (Q81W27), PDXS_BACC0 (B7JJC6), PDXS_BACC1 (Q73FJ5), PDXS_BACC2 (B7IS29), PDXS_BACC3 (C1ES17), PDXS_BACC4 (B7HII3), PDXS_BACC7 (B7HPS6), PDXS_BACCN (A7GJS8), PDXS_BACCQ (B9IYH8), PDXS_BACCR (Q81JC6), PDXS_BACCZ (Q63HF8), PDXS_BACHK (Q6HQ05), PDXS_BACLD (Q65PL2), PDXS_BACMK (A9VM99), PDXS_BACP2 (A8FAD5), PDXS_BACSU (P37527), PDXS_BACVZ (A7Z0D3), PDXS_BIFA0 (B8DWP6), PDXS_BIFAA (A1A3A5), PDXS_BIFLD (B3DT80), PDXS_BIFLO (Q8G574), PDXS_BIFLS (B7GUB5), PDXS_CALS4 (Q8RBJ3), PDXS_CHLAA (A9WFT9), PDXS_CHLAD (B8G663), PDXS_CHLSY (B9LIK3), PDXS_CLOAB (Q97LG7), PDXS_CLOBL (A7GH18), PDXS_CLOBM (B1KYX5), PDXS_CLONO (Q84IL8), PDXS_CORDI (P60800), PDXS_COREF (Q8FPJ9), PDXS_CORGL (P82134), PDXS_CORU7 (B1VDJ3), PDXS_CUTAK (Q6A948), PDXS_DEHM1 (Q3Z9H3), PDXS_DEHMB (A5FS82), PDXS_DEHMC (Q3ZZB8), PDXS_DEIRA (Q9RUL7), PDXS_DESA1 (B8D3X7), PDXS_DESDA (B8J2D5), PDXS_DICT6 (B5YF85), PDXS_DICTD (B8E121), PDXS_FRAP2 (B0TZ17), PDXS_FRAT1 (Q14IU8), PDXS_FRATF (A7NDQ3), PDXS_FRATH (Q2A260), PDXS_FRATM (B2SDL5), PDXS_FRATN (A0Q5I1), PDXS_FRATO (Q0BKT2), PDXS_FRATT (Q5NHE6), PDXS_FRATU (O69190), PDXS_FRATW (A4IZB5), PDXS_FUSNN (Q8RDP7), PDXS_GEOKA (Q5L3Y2), PDXS_GEOSW (C5D337), PDXS_GEOTN (A4IJ94), PDXS_HAEDU (Q7VL86), PDXS_HAEI8 (Q4QJU5), PDXS_HAEIE (A5UBN2), PDXS_HAEIG (A5UF86), PDXS_HAEIN (P45293), PDXS_HALH5 (Q9KGN6), PDXS_HALLT (B9LRS6), PDXS_HALMA (Q5V1G7), PDXS_HALS3 (B0R6D5), PDXS_HALSA (Q9HP57), PDXS_HALWD (Q18F41), PDXS_HELMI (B0TAQ4), PDXS_HERA2 (A9B891), PDXS_HYPBU (A2BLL5), PDXS_LEIXX (Q6AFB9), PDXS_LISIN (Q929R9), PDXS_LISMC (C1KX53), PDXS_LISMF (Q71XR3), PDXS_LISMH (B8DH17), PDXS_LISMO (Q8Y5G2), PDXS_LISW6 (A0AKK8), PDXS_MACCJ (B9E8T2), PDXS_META3 (A6UWM0), PDXS_METAC (Q8TQH6), PDXS_METJA (Q58090), PDXS_METKA (Q8TVL8), PDXS_METLZ (A2SPJ9), PDXS_METM5 (A4G086), PDXS_METM6 (A9A8I8), PDXS_METM7 (A6VI92), PDXS_METMA (Q8PUA5), PDXS_METMP (Q6M115), PDXS_METS5 (A4YI11), PDXS_METTH (O26762), PDXS_METVA (Q50841), PDXS_METVS (A6UR91), PDXS_MYCA1 (A0QIC8), PDXS_MYCBO (P60795), PDXS_MYCBP (A1KLV6), PDXS_MYCBT (C1AF77), PDXS_MYCLB (B8ZUG3), PDXS_MYCLE (O07145), PDXS_MYCPA (Q73WF0), PDXS_MYCS2 (A0QWG8), PDXS_MYCTA (A5U5V7), PDXS_MYCTO (P9WII8), PDXS_MYCTU (P9WII9), PDXS_NATPD (Q3INE8), PDXS_NATTJ (B2A2Z7), PDXS_NIACI (Q8L1A8), PDXS_NOCFA (Q5YTD8), PDXS_OCEIH (Q8EN03), PDXS_PARUW (Q6MEN8), PDXS_PASMU (Q9CLJ6), PDXS_PICTO (Q6L2D8), PDXS_PYRAB (Q9V0J7), PDXS_PYRAE (Q8ZUF0), PDXS_PYRAR (A4WHH6), PDXS_PYRFU (Q8U0Q6), PDXS_PYRHO (O59080), PDXS_ROSCS (A7NQB8), PDXS_ROSS1 (A5UY94), PDXS_RUMCH (B8I363), PDXS_SACS2 (Q9UWX3), PDXS_SALAI (A8LWZ4), PDXS_SALTO (A4X5V3), PDXS_SHOC1 (Q5WKW2), PDXS_STAA1 (A7WYT1), PDXS_STAA2 (A6TYZ5), PDXS_STAA3 (Q2FJC1), PDXS_STAA8 (Q2G0Q1), PDXS_STAA9 (A5IQ72), PDXS_STAAC (Q5HIF5), PDXS_STAAE (A6QEH1), PDXS_STAAM (P60797), PDXS_STAAN (P60798), PDXS_STAAR (Q6GJF0), PDXS_STAAS (Q6GBW9), PDXS_STAAT (A8YZL5), PDXS_STAAW (P60799), PDXS_STACT (B9DKX7), PDXS_STAEQ (Q5HRN5), PDXS_STAES (Q8CQV7), PDXS_STAHJ (Q4L3H8), PDXS_STAS1 (Q49V28), PDXS_STRAW (Q827U0), PDXS_STRCO (Q9L286), PDXS_STRP2 (Q04JN5), PDXS_STRP4 (B5E5W1), PDXS_STRP7 (C1C863), PDXS_STRPI (B1ICP9), PDXS_STRPJ (B8ZL14), PDXS_STRPN (Q97PX2), PDXS_STRR6 (Q8DP71), PDXS_STRZJ (C1CF50), PDXS_STRZP (C1CLG7), PDXS_STRZT (C1CQQ0), PDXS_SULAC (Q4J8L3), PDXS_SULIA (C3N6C8), PDXS_SULIK (C4KHU3), PDXS_SULIL (C3MQK8), PDXS_SULIM (C3MW86), PDXS_SULIN (C3NGV8), PDXS_SULIY (C3NET6), PDXS_SULTO (Q971B3), PDXS_SYNAS (Q2LXR2), PDXS_THEAC (Q9HKS5), PDXS_THEGJ (C5A4G9), PDXS_THEKO (Q5JFR1), PDXS_THEMA (Q9WYU4), PDXS_THEON (B6YVQ7), PDXS_THEP1 (A5IJU8), PDXS_THEP3 (B0KAS1), PDXS_THEPX (B0K4N7), PDXS_THESQ (B1L920), PDXS_THET2 (Q72KG1), PDXS_THET8 (Q5SKD9), PDXS_THEVO (Q979Y3), PDXS_TREDE (Q73QI7), PDXS_TROW8 (Q83HM5), PDXS_TROWT (Q83MZ9), SNZ1_YEAST (Q03148), SNZ2_YEAST (P53824), SNZ3_YEAST (P43545)» more
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| UniProtKB/Swiss-Prot False negative sequences |
4 sequences
PDXS_DESHD (B8FZR3), PDXS_DESHY (Q24PK7), PDXS_METST (Q2NI73), PDXS_PYRCJ (A3MSN0)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
PDXS_CLOPA (P81356) |
| PDB [Detailed view] |
34 PDB
1ZNN; 2ISS; 2NV1; 2NV2; 2YZR; 2ZBT; 3FEM; 3O05; 3O06; 3O07; 4ADS; 4ADT; 4ADU; 4FIQ; 4FIR; 4JDY; 4WXY; 4WXZ; 4WY0; 5K2Z; 5K3V; 5LNR; 5LNS; 5LNT; 5LNU; 5LNV; 5LNW; 6HX3; 6HXG; 6HYE; 7LB5; 7LB6; 7NHE; 7NHF » more |