Home  |  Contact
Entry: PS01235

General information about the entry

Entry name [info] PDXS_SNZ_1
Accession [info] PS01235
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE;
10-FEB-2021 INFO UPDATE.
PROSITE Doc. [info] PDOC00949

Name and characterization of the entry

Description [info] PdxS/SNZ family signature.
Pattern [info] 
[LV]-P-[VI]-[VTPI]-[NQLHT]-[FL]-[ATVS]-[AS]-G-G-[LIV]-[AT]-T-P-[AQS]-D-
[AGVS]-[AS]-[LM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2021_01 which contains 564'277 sequence entries.


Total number of hits 206 in 206 different sequences
Number of true positive hits 206 in 206 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 4
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.10 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 206 sequences 

PDX11_ARATH (O80448    ), PDX11_ORYSJ (Q69LA6    ), PDX12_ARATH (Q9ZNR6    ), 

PDX12_ORYSJ (Q8W3D0    ), PDX13_ARATH (Q8L940    ), PDX1_CERNC  (O59905    ), 
PDX1_DICDI  (Q54J47    ), PDX1_EMENI  (Q9UW83    ), PDX1_GINBI  (Q9AT63    ), 
PDX1_HEVBR  (Q39963    ), PDX1_NEUCR  (Q9C1K6    ), PDX1_PHAVU  (Q9FT25    ), 
PDX1_PLABE  (P0DMS0    ), PDX1_PLAF7  (C6KT50    ), PDX1_SCHPO  (O14027    ), 
PDX1_STELP  (Q41348    ), PDX1_SUBDO  (Q8WPW2    ), PDXS_ACTP2  (A3MZT8    ), 
PDXS_ACTP7  (B3GXB6    ), PDXS_ACTPJ  (B0BUD0    ), PDXS_AERPE  (Q9YFK2    ), 
PDXS_ANOFW  (B7GFL8    ), PDXS_ARCFU  (O29742    ), PDXS_BACAA  (C3P8Q3    ), 
PDXS_BACAC  (C3LIY7    ), PDXS_BACAN  (Q81W27    ), PDXS_BACC0  (B7JJC6    ), 
PDXS_BACC1  (Q73FJ5    ), PDXS_BACC2  (B7IS29    ), PDXS_BACC3  (C1ES17    ), 
PDXS_BACC4  (B7HII3    ), PDXS_BACC7  (B7HPS6    ), PDXS_BACCI  (Q8L1A8    ), 
PDXS_BACCN  (A7GJS8    ), PDXS_BACCQ  (B9IYH8    ), PDXS_BACCR  (Q81JC6    ), 
PDXS_BACCZ  (Q63HF8    ), PDXS_BACHD  (Q9KGN6    ), PDXS_BACHK  (Q6HQ05    ), 
PDXS_BACLD  (Q65PL2    ), PDXS_BACMK  (A9VM99    ), PDXS_BACP2  (A8FAD5    ), 
PDXS_BACSK  (Q5WKW2    ), PDXS_BACSU  (P37527    ), PDXS_BACVZ  (A7Z0D3    ), 
PDXS_BIFA0  (B8DWP6    ), PDXS_BIFAA  (A1A3A5    ), PDXS_BIFLD  (B3DT80    ), 
PDXS_BIFLO  (Q8G574    ), PDXS_BIFLS  (B7GUB5    ), PDXS_CALS4  (Q8RBJ3    ), 
PDXS_CHLAA  (A9WFT9    ), PDXS_CHLAD  (B8G663    ), PDXS_CHLSY  (B9LIK3    ), 
PDXS_CLOAB  (Q97LG7    ), PDXS_CLOBL  (A7GH18    ), PDXS_CLOBM  (B1KYX5    ), 
PDXS_CLONO  (Q84IL8    ), PDXS_CORDI  (P60800    ), PDXS_COREF  (Q8FPJ9    ), 
PDXS_CORGL  (P82134    ), PDXS_CORU7  (B1VDJ3    ), PDXS_CUTAK  (Q6A948    ), 
PDXS_DEHM1  (Q3Z9H3    ), PDXS_DEHMB  (A5FS82    ), PDXS_DEHMC  (Q3ZZB8    ), 
PDXS_DEIRA  (Q9RUL7    ), PDXS_DESA1  (B8D3X7    ), PDXS_DESDA  (B8J2D5    ), 
PDXS_DICT6  (B5YF85    ), PDXS_DICTD  (B8E121    ), PDXS_FRAP2  (B0TZ17    ), 
PDXS_FRAT1  (Q14IU8    ), PDXS_FRATF  (A7NDQ3    ), PDXS_FRATH  (Q2A260    ), 
PDXS_FRATM  (B2SDL5    ), PDXS_FRATN  (A0Q5I1    ), PDXS_FRATO  (Q0BKT2    ), 
PDXS_FRATT  (Q5NHE6    ), PDXS_FRATU  (O69190    ), PDXS_FRATW  (A4IZB5    ), 
PDXS_FUSNN  (Q8RDP7    ), PDXS_GEOKA  (Q5L3Y2    ), PDXS_GEOSW  (C5D337    ), 
PDXS_GEOTN  (A4IJ94    ), PDXS_HAEDU  (Q7VL86    ), PDXS_HAEI8  (Q4QJU5    ), 
PDXS_HAEIE  (A5UBN2    ), PDXS_HAEIG  (A5UF86    ), PDXS_HAEIN  (P45293    ), 
PDXS_HALLT  (B9LRS6    ), PDXS_HALMA  (Q5V1G7    ), PDXS_HALS3  (B0R6D5    ), 
PDXS_HALSA  (Q9HP57    ), PDXS_HALWD  (Q18F41    ), PDXS_HELMI  (B0TAQ4    ), 
PDXS_HERA2  (A9B891    ), PDXS_HYPBU  (A2BLL5    ), PDXS_LEIXX  (Q6AFB9    ), 
PDXS_LISIN  (Q929R9    ), PDXS_LISMC  (C1KX53    ), PDXS_LISMF  (Q71XR3    ), 
PDXS_LISMH  (B8DH17    ), PDXS_LISMO  (Q8Y5G2    ), PDXS_LISW6  (A0AKK8    ), 
PDXS_MACCJ  (B9E8T2    ), PDXS_META3  (A6UWM0    ), PDXS_METAC  (Q8TQH6    ), 
PDXS_METJA  (Q58090    ), PDXS_METKA  (Q8TVL8    ), PDXS_METLZ  (A2SPJ9    ), 
PDXS_METM5  (A4G086    ), PDXS_METM6  (A9A8I8    ), PDXS_METM7  (A6VI92    ), 
PDXS_METMA  (Q8PUA5    ), PDXS_METMP  (Q6M115    ), PDXS_METS5  (A4YI11    ), 
PDXS_METTH  (O26762    ), PDXS_METVA  (Q50841    ), PDXS_METVS  (A6UR91    ), 
PDXS_MYCA1  (A0QIC8    ), PDXS_MYCBO  (P60795    ), PDXS_MYCBP  (A1KLV6    ), 
PDXS_MYCBT  (C1AF77    ), PDXS_MYCLB  (B8ZUG3    ), PDXS_MYCLE  (O07145    ), 
PDXS_MYCPA  (Q73WF0    ), PDXS_MYCS2  (A0QWG8    ), PDXS_MYCTA  (A5U5V7    ), 
PDXS_MYCTO  (P9WII8    ), PDXS_MYCTU  (P9WII9    ), PDXS_NATPD  (Q3INE8    ), 
PDXS_NATTJ  (B2A2Z7    ), PDXS_NOCFA  (Q5YTD8    ), PDXS_OCEIH  (Q8EN03    ), 
PDXS_PARUW  (Q6MEN8    ), PDXS_PASMU  (Q9CLJ6    ), PDXS_PICTO  (Q6L2D8    ), 
PDXS_PYRAB  (Q9V0J7    ), PDXS_PYRAE  (Q8ZUF0    ), PDXS_PYRAR  (A4WHH6    ), 
PDXS_PYRFU  (Q8U0Q6    ), PDXS_PYRHO  (O59080    ), PDXS_ROSCS  (A7NQB8    ), 
PDXS_ROSS1  (A5UY94    ), PDXS_RUMCH  (B8I363    ), PDXS_SACS2  (Q9UWX3    ), 
PDXS_SALAI  (A8LWZ4    ), PDXS_SALTO  (A4X5V3    ), PDXS_STAA1  (A7WYT1    ), 
PDXS_STAA2  (A6TYZ5    ), PDXS_STAA3  (Q2FJC1    ), PDXS_STAA8  (Q2G0Q1    ), 
PDXS_STAA9  (A5IQ72    ), PDXS_STAAC  (Q5HIF5    ), PDXS_STAAE  (A6QEH1    ), 
PDXS_STAAM  (P60797    ), PDXS_STAAN  (P60798    ), PDXS_STAAR  (Q6GJF0    ), 
PDXS_STAAS  (Q6GBW9    ), PDXS_STAAT  (A8YZL5    ), PDXS_STAAW  (P60799    ), 
PDXS_STACT  (B9DKX7    ), PDXS_STAEQ  (Q5HRN5    ), PDXS_STAES  (Q8CQV7    ), 
PDXS_STAHJ  (Q4L3H8    ), PDXS_STAS1  (Q49V28    ), PDXS_STRAW  (Q827U0    ), 
PDXS_STRCO  (Q9L286    ), PDXS_STRP2  (Q04JN5    ), PDXS_STRP4  (B5E5W1    ), 
PDXS_STRP7  (C1C863    ), PDXS_STRPI  (B1ICP9    ), PDXS_STRPJ  (B8ZL14    ), 
PDXS_STRPN  (Q97PX2    ), PDXS_STRR6  (Q8DP71    ), PDXS_STRZJ  (C1CF50    ), 
PDXS_STRZP  (C1CLG7    ), PDXS_STRZT  (C1CQQ0    ), PDXS_SULAC  (Q4J8L3    ), 
PDXS_SULIA  (C3N6C8    ), PDXS_SULIK  (C4KHU3    ), PDXS_SULIL  (C3MQK8    ), 
PDXS_SULIM  (C3MW86    ), PDXS_SULIN  (C3NGV8    ), PDXS_SULIY  (C3NET6    ), 
PDXS_SULTO  (Q971B3    ), PDXS_SYNAS  (Q2LXR2    ), PDXS_THEAC  (Q9HKS5    ), 
PDXS_THEGJ  (C5A4G9    ), PDXS_THEKO  (Q5JFR1    ), PDXS_THEMA  (Q9WYU4    ), 
PDXS_THEON  (B6YVQ7    ), PDXS_THEP1  (A5IJU8    ), PDXS_THEP3  (B0KAS1    ), 
PDXS_THEPX  (B0K4N7    ), PDXS_THESQ  (B1L920    ), PDXS_THET2  (Q72KG1    ), 
PDXS_THET8  (Q5SKD9    ), PDXS_THEVO  (Q979Y3    ), PDXS_TREDE  (Q73QI7    ), 
PDXS_TROW8  (Q83HM5    ), PDXS_TROWT  (Q83MZ9    ), SNZ1_YEAST  (Q03148    ), 
SNZ2_YEAST  (P53824    ), SNZ3_YEAST  (P43545    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 4 sequences 

PDXS_DESHD  (B8FZR3    ), PDXS_DESHY  (Q24PK7    ), PDXS_METST  (Q2NI73    ), 

PDXS_PYRCJ  (A3MSN0    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

PDXS_CLOPA  (P81356    )


				
	

	

		PDB
[Detailed view]		
		
			30 PDB
			


			1ZNN; 2ISS; 2NV1; 2NV2; 2YZR; 2ZBT; 3FEM; 3O05; 3O06; 3O07; 4ADS; 4ADT; 
			
				4ADU; 4FIQ; 4FIR; 4JDY; 4WXY; 4WXZ; 4WY0; 5K2Z; 5K3V; 5LNR; 5LNS; 5LNT; 
				5LNU; 5LNV; 5LNW; 6HX3; 6HXG; 6HYE
			
			

			» more

				
	





View entry in original PROSITE format


View entry in raw text format (no links)


Direct ScanProsite submission