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PROSITE entry PS01235


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General information about the entry

Entry name [info] PDXS_SNZ_1
Accession [info] PS01235
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE;
24-JAN-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00949

Name and characterization of the entry

Description [info] PdxS/SNZ family signature.
Pattern [info]
[LV]-P-[VI]-[VTPI]-[NQLHT]-[FL]-[ATVS]-[AS]-G-G-[LIV]-[AT]-T-P-[AQS]-D-
[AGVS]-[AS]-[LM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_01 which contains 570'830 sequence entries.


Total number of hits 206 in 206 different sequences
Number of true positive hits 206 in 206 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 4
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.10 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
206 sequences

PDX11_ARATH (O80448), PDX11_ORYSJ (Q69LA6), PDX12_ARATH (Q9ZNR6), 
PDX12_ORYSJ (Q8W3D0), PDX13_ARATH (Q8L940), PDX1_CERNC  (O59905), 
PDX1_DICDI  (Q54J47), PDX1_EMENI  (Q9UW83), PDX1_GINBI  (Q9AT63), 
PDX1_HEVBR  (Q39963), PDX1_NEUCR  (Q9C1K6), PDX1_PHAVU  (Q9FT25), 
PDX1_PLABE  (P0DMS0), PDX1_PLAF7  (C6KT50), PDX1_SCHPO  (O14027), 
PDX1_STELP  (Q41348), PDX1_SUBDO  (Q8WPW2), PDXS_ACTP2  (A3MZT8), 
PDXS_ACTP7  (B3GXB6), PDXS_ACTPJ  (B0BUD0), PDXS_AERPE  (Q9YFK2), 
PDXS_ANOFW  (B7GFL8), PDXS_ARCFU  (O29742), PDXS_BACAA  (C3P8Q3), 
PDXS_BACAC  (C3LIY7), PDXS_BACAN  (Q81W27), PDXS_BACC0  (B7JJC6), 
PDXS_BACC1  (Q73FJ5), PDXS_BACC2  (B7IS29), PDXS_BACC3  (C1ES17), 
PDXS_BACC4  (B7HII3), PDXS_BACC7  (B7HPS6), PDXS_BACCN  (A7GJS8), 
PDXS_BACCQ  (B9IYH8), PDXS_BACCR  (Q81JC6), PDXS_BACCZ  (Q63HF8), 
PDXS_BACHK  (Q6HQ05), PDXS_BACLD  (Q65PL2), PDXS_BACMK  (A9VM99), 
PDXS_BACP2  (A8FAD5), PDXS_BACSU  (P37527), PDXS_BACVZ  (A7Z0D3), 
PDXS_BIFA0  (B8DWP6), PDXS_BIFAA  (A1A3A5), PDXS_BIFLD  (B3DT80), 
PDXS_BIFLO  (Q8G574), PDXS_BIFLS  (B7GUB5), PDXS_CALS4  (Q8RBJ3), 
PDXS_CHLAA  (A9WFT9), PDXS_CHLAD  (B8G663), PDXS_CHLSY  (B9LIK3), 
PDXS_CLOAB  (Q97LG7), PDXS_CLOBL  (A7GH18), PDXS_CLOBM  (B1KYX5), 
PDXS_CLONO  (Q84IL8), PDXS_CORDI  (P60800), PDXS_COREF  (Q8FPJ9), 
PDXS_CORGL  (P82134), PDXS_CORU7  (B1VDJ3), PDXS_CUTAK  (Q6A948), 
PDXS_DEHM1  (Q3Z9H3), PDXS_DEHMB  (A5FS82), PDXS_DEHMC  (Q3ZZB8), 
PDXS_DEIRA  (Q9RUL7), PDXS_DESA1  (B8D3X7), PDXS_DESDA  (B8J2D5), 
PDXS_DICT6  (B5YF85), PDXS_DICTD  (B8E121), PDXS_FRAP2  (B0TZ17), 
PDXS_FRAT1  (Q14IU8), PDXS_FRATF  (A7NDQ3), PDXS_FRATH  (Q2A260), 
PDXS_FRATM  (B2SDL5), PDXS_FRATN  (A0Q5I1), PDXS_FRATO  (Q0BKT2), 
PDXS_FRATT  (Q5NHE6), PDXS_FRATU  (O69190), PDXS_FRATW  (A4IZB5), 
PDXS_FUSNN  (Q8RDP7), PDXS_GEOKA  (Q5L3Y2), PDXS_GEOSW  (C5D337), 
PDXS_GEOTN  (A4IJ94), PDXS_HAEDU  (Q7VL86), PDXS_HAEI8  (Q4QJU5), 
PDXS_HAEIE  (A5UBN2), PDXS_HAEIG  (A5UF86), PDXS_HAEIN  (P45293), 
PDXS_HALH5  (Q9KGN6), PDXS_HALLT  (B9LRS6), PDXS_HALMA  (Q5V1G7), 
PDXS_HALS3  (B0R6D5), PDXS_HALSA  (Q9HP57), PDXS_HALWD  (Q18F41), 
PDXS_HELMI  (B0TAQ4), PDXS_HERA2  (A9B891), PDXS_HYPBU  (A2BLL5), 
PDXS_LEIXX  (Q6AFB9), PDXS_LISIN  (Q929R9), PDXS_LISMC  (C1KX53), 
PDXS_LISMF  (Q71XR3), PDXS_LISMH  (B8DH17), PDXS_LISMO  (Q8Y5G2), 
PDXS_LISW6  (A0AKK8), PDXS_MACCJ  (B9E8T2), PDXS_META3  (A6UWM0), 
PDXS_METAC  (Q8TQH6), PDXS_METJA  (Q58090), PDXS_METKA  (Q8TVL8), 
PDXS_METLZ  (A2SPJ9), PDXS_METM5  (A4G086), PDXS_METM6  (A9A8I8), 
PDXS_METM7  (A6VI92), PDXS_METMA  (Q8PUA5), PDXS_METMP  (Q6M115), 
PDXS_METS5  (A4YI11), PDXS_METTH  (O26762), PDXS_METVA  (Q50841), 
PDXS_METVS  (A6UR91), PDXS_MYCA1  (A0QIC8), PDXS_MYCBO  (P60795), 
PDXS_MYCBP  (A1KLV6), PDXS_MYCBT  (C1AF77), PDXS_MYCLB  (B8ZUG3), 
PDXS_MYCLE  (O07145), PDXS_MYCPA  (Q73WF0), PDXS_MYCS2  (A0QWG8), 
PDXS_MYCTA  (A5U5V7), PDXS_MYCTO  (P9WII8), PDXS_MYCTU  (P9WII9), 
PDXS_NATPD  (Q3INE8), PDXS_NATTJ  (B2A2Z7), PDXS_NIACI  (Q8L1A8), 
PDXS_NOCFA  (Q5YTD8), PDXS_OCEIH  (Q8EN03), PDXS_PARUW  (Q6MEN8), 
PDXS_PASMU  (Q9CLJ6), PDXS_PICTO  (Q6L2D8), PDXS_PYRAB  (Q9V0J7), 
PDXS_PYRAE  (Q8ZUF0), PDXS_PYRAR  (A4WHH6), PDXS_PYRFU  (Q8U0Q6), 
PDXS_PYRHO  (O59080), PDXS_ROSCS  (A7NQB8), PDXS_ROSS1  (A5UY94), 
PDXS_RUMCH  (B8I363), PDXS_SACS2  (Q9UWX3), PDXS_SALAI  (A8LWZ4), 
PDXS_SALTO  (A4X5V3), PDXS_SHOC1  (Q5WKW2), PDXS_STAA1  (A7WYT1), 
PDXS_STAA2  (A6TYZ5), PDXS_STAA3  (Q2FJC1), PDXS_STAA8  (Q2G0Q1), 
PDXS_STAA9  (A5IQ72), PDXS_STAAC  (Q5HIF5), PDXS_STAAE  (A6QEH1), 
PDXS_STAAM  (P60797), PDXS_STAAN  (P60798), PDXS_STAAR  (Q6GJF0), 
PDXS_STAAS  (Q6GBW9), PDXS_STAAT  (A8YZL5), PDXS_STAAW  (P60799), 
PDXS_STACT  (B9DKX7), PDXS_STAEQ  (Q5HRN5), PDXS_STAES  (Q8CQV7), 
PDXS_STAHJ  (Q4L3H8), PDXS_STAS1  (Q49V28), PDXS_STRAW  (Q827U0), 
PDXS_STRCO  (Q9L286), PDXS_STRP2  (Q04JN5), PDXS_STRP4  (B5E5W1), 
PDXS_STRP7  (C1C863), PDXS_STRPI  (B1ICP9), PDXS_STRPJ  (B8ZL14), 
PDXS_STRPN  (Q97PX2), PDXS_STRR6  (Q8DP71), PDXS_STRZJ  (C1CF50), 
PDXS_STRZP  (C1CLG7), PDXS_STRZT  (C1CQQ0), PDXS_SULAC  (Q4J8L3), 
PDXS_SULIA  (C3N6C8), PDXS_SULIK  (C4KHU3), PDXS_SULIL  (C3MQK8), 
PDXS_SULIM  (C3MW86), PDXS_SULIN  (C3NGV8), PDXS_SULIY  (C3NET6), 
PDXS_SULTO  (Q971B3), PDXS_SYNAS  (Q2LXR2), PDXS_THEAC  (Q9HKS5), 
PDXS_THEGJ  (C5A4G9), PDXS_THEKO  (Q5JFR1), PDXS_THEMA  (Q9WYU4), 
PDXS_THEON  (B6YVQ7), PDXS_THEP1  (A5IJU8), PDXS_THEP3  (B0KAS1), 
PDXS_THEPX  (B0K4N7), PDXS_THESQ  (B1L920), PDXS_THET2  (Q72KG1), 
PDXS_THET8  (Q5SKD9), PDXS_THEVO  (Q979Y3), PDXS_TREDE  (Q73QI7), 
PDXS_TROW8  (Q83HM5), PDXS_TROWT  (Q83MZ9), SNZ1_YEAST  (Q03148), 
SNZ2_YEAST  (P53824), SNZ3_YEAST  (P43545)
» more

UniProtKB/Swiss-Prot
False negative sequences
4 sequences

PDXS_DESHD  (B8FZR3), PDXS_DESHY  (Q24PK7), PDXS_METST  (Q2NI73), 
PDXS_PYRCJ  (A3MSN0)
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

PDXS_CLOPA  (P81356)

		
PDB
[Detailed view]
34 PDB

1ZNN; 2ISS; 2NV1; 2NV2; 2YZR; 2ZBT; 3FEM; 3O05; 3O06; 3O07; 4ADS; 4ADT; 4ADU; 4FIQ; 4FIR; 4JDY; 4WXY; 4WXZ; 4WY0; 5K2Z; 5K3V; 5LNR; 5LNS; 5LNT; 5LNU; 5LNV; 5LNW; 6HX3; 6HXG; 6HYE; 7LB5; 7LB6; 7NHE; 7NHF
» more