PROSITE entry PS01236
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General information about the entry
| Entry name [info] | PDXT_SNO_1 |
| Accession [info] | PS01236 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-APR-2006 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00950 |
Name and characterization of the entry
| Description [info] | PdxT/SNO family family signature. |
| Pattern [info] |
[GARVS]-[LVI]-[ILAV]-[LIVF]-P-G-G-E-S-[TS]-[STAV]. |
Numerical results [info]
| Total number of hits | 241 in 241 different sequences |
| Number of true positive hits | 241 in 241 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 11 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 95.63 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
241 sequences
PDX2_ARATH (Q8LAD0 ), PDX2_DICDI (Q54J48 ), PDX2_PLABE (Q4PJX5 ), PDX2_PLAF7 (Q8IIK4 ), PDXT_ACIC1 (A0LUK9 ), PDXT_ACTP2 (A3MZT9 ), PDXT_ACTP7 (B3GXB7 ), PDXT_ACTPJ (B0BUD1 ), PDXT_AERPE (Q9YFK4 ), PDXT_ALKCK (Q5WKW1 ), PDXT_ANOFW (B7GFL9 ), PDXT_ARCFU (O29741 ), PDXT_ARTS2 (A0JXB5 ), PDXT_AZOPC (B6YQU3 ), PDXT_BACAA (C3P8Q4 ), PDXT_BACAC (C3LIY8 ), PDXT_BACAH (A0R890 ), PDXT_BACAN (Q81W26 ), PDXT_BACC0 (B7JJC7 ), PDXT_BACC1 (Q73FJ4 ), PDXT_BACC2 (B7IS30 ), PDXT_BACC3 (C1ES18 ), PDXT_BACC4 (B7HII4 ), PDXT_BACC7 (B7HPS7 ), PDXT_BACCN (A7GJS9 ), PDXT_BACCQ (B9IYH9 ), PDXT_BACCR (Q81JC5 ), PDXT_BACCZ (Q63HF7 ), PDXT_BACHK (Q6HQ04 ), PDXT_BACLD (Q65PL1 ), PDXT_BACMK (A9VMA0 ), PDXT_BACP2 (A8FAD6 ), PDXT_BACSU (P37528 ), PDXT_BACVZ (A7Z0D4 ), PDXT_BIFAA (A1A3A4 ), PDXT_BIFLO (Q8G575 ), PDXT_BREBN (C0ZH53 ), PDXT_CALBD (B9MKY8 ), PDXT_CALMQ (A8MAY1 ), PDXT_CALS4 (Q8RBJ4 ), PDXT_CALS8 (A4XIB6 ), PDXT_CARHZ (Q3A8Q0 ), PDXT_CENSY (A0RTP4 ), PDXT_CHLAA (A9WFU0 ), PDXT_CHLSY (B9LIK4 ), PDXT_CLAM3 (A5CS10 ), PDXT_CLAMS (B0REB6 ), PDXT_CLOAB (Q97LG6 ), PDXT_CLOB8 (A6M3G5 ), PDXT_CLOBM (B1KYX4 ), PDXT_CLOK1 (B9E3V5 ), PDXT_CLOK5 (A5MZY0 ), PDXT_CORDI (Q6NK10 ), PDXT_CORGB (A4QCC4 ), PDXT_CORGL (Q8NS90 ), PDXT_CUTAK (Q6A947 ), PDXT_DEHM1 (Q3Z8V9 ), PDXT_DEHMB (A5FRL6 ), PDXT_DEHMC (Q3ZX06 ), PDXT_DEIGD (Q1IZC9 ), PDXT_DEIRA (Q9RUL8 ), PDXT_DESAP (B1I158 ), PDXT_DESHD (B8FZR4 ), PDXT_DESHY (Q24PK8 ), PDXT_DESRM (A4J0G0 ), PDXT_DICT6 (B5YF84 ), PDXT_DICTD (B8E120 ), PDXT_EXIS2 (B1YGC2 ), PDXT_FERNB (A7HNV0 ), PDXT_FRAAA (Q0RNV0 ), PDXT_FRACC (Q2JD98 ), PDXT_FRAP2 (B0TZ16 ), PDXT_FRASN (A8KZF0 ), PDXT_FRAT1 (Q14IU7 ), PDXT_FRATF (A7NDQ2 ), PDXT_FRATH (Q2A261 ), PDXT_FRATM (B2SDL4 ), PDXT_FRATN (A0Q5I2 ), PDXT_FRATO (Q0BKT3 ), PDXT_FRATT (Q5NHE5 ), PDXT_FRATW (A4IZB4 ), PDXT_GEOKA (Q5L3Y1 ), PDXT_GEOSE (P83813 ), PDXT_GEOSW (C5D338 ), PDXT_GEOTN (A4IJ95 ), PDXT_HAEDU (Q7VL87 ), PDXT_HAEI8 (Q4QJU4 ), PDXT_HAEIE (A5UBN1 ), PDXT_HAEIG (A5UF87 ), PDXT_HAEIN (P45294 ), PDXT_HALH5 (Q9KGN5 ), PDXT_HALMA (Q5UZW7 ), PDXT_HALS3 (B0R879 ), PDXT_HALSA (Q9HMD2 ), PDXT_HALWD (Q18KL6 ), PDXT_HERA2 (A9B890 ), PDXT_HYPBU (A2BLL6 ), PDXT_IGNH4 (A8A8T7 ), PDXT_KINRD (A6WCI3 ), PDXT_KORCO (B1L4Z3 ), PDXT_KORVE (Q1IQH8 ), PDXT_LEIXX (Q6AFB8 ), PDXT_LISIN (Q929R8 ), PDXT_LISMC (C1KX54 ), PDXT_LISMF (Q71XR2 ), PDXT_LISMH (B8DH16 ), PDXT_LISMO (Q8Y5G1 ), PDXT_LISW6 (A0AKK9 ), PDXT_META3 (A6UWZ3 ), PDXT_METAC (Q8TQH7 ), PDXT_METAR (Q0W8A8 ), PDXT_METB6 (A7I472 ), PDXT_METBF (Q465J4 ), PDXT_METBU (Q12YR6 ), PDXT_METHJ (Q2FTH1 ), PDXT_METJA (Q59055 ), PDXT_METKA (Q8TWH2 ), PDXT_METLZ (A2SPK0 ), PDXT_METM5 (A4G0R6 ), PDXT_METM6 (A9A909 ), PDXT_METM7 (A6VHR9 ), PDXT_METMA (Q8PUA4 ), PDXT_METMJ (A3CRE5 ), PDXT_METMP (P0C036 ), PDXT_METPE (B8GE19 ), PDXT_METS5 (A4YI12 ), PDXT_METTP (A0B7N4 ), PDXT_METVS (A6UQT7 ), PDXT_MOOTA (Q2RMI9 ), PDXT_MYCA1 (A0QIC6 ), PDXT_MYCA9 (B1MCJ8 ), PDXT_MYCBO (Q7TY92 ), PDXT_MYCBP (A1KLV4 ), PDXT_MYCBT (C1AF75 ), PDXT_MYCLE (Q9CCT5 ), PDXT_MYCMM (B2HN48 ), PDXT_MYCPA (Q73WF2 ), PDXT_MYCS2 (A0QWH0 ), PDXT_MYCSJ (A3PYU8 ), PDXT_MYCSK (A1UF87 ), PDXT_MYCSS (Q1B9S6 ), PDXT_MYCTA (A5U5V5 ), PDXT_MYCTO (P9WII6 ), PDXT_MYCTU (P9WII7 ), PDXT_MYCUA (A0PSY6 ), PDXT_MYCVP (A1T876 ), PDXT_NIACI (Q8L1A7 ), PDXT_NITMS (A9A4S0 ), PDXT_NOCFA (Q5YTE0 ), PDXT_NOCSJ (A1SJA2 ), PDXT_OCEIH (Q8EN04 ), PDXT_OENOB (Q04F27 ), PDXT_PAEAT (A1R728 ), PDXT_PARUW (Q6MEN7 ), PDXT_PASMU (Q9CLJ5 ), PDXT_PELTS (A5D6D2 ), PDXT_PICTO (Q6L1R3 ), PDXT_PSECP (B8H9E0 ), PDXT_PSELT (A8F840 ), PDXT_PYRAB (Q9V0J6 ), PDXT_PYRAE (Q8ZUE9 ), PDXT_PYRAR (A4WHH5 ), PDXT_PYRFU (Q8TH23 ), PDXT_PYRHO (O59079 ), PDXT_PYRNV (B1YB90 ), PDXT_RENSM (A9WSE8 ), PDXT_RHOJR (Q0S1D2 ), PDXT_RHOOB (C1B4C5 ), PDXT_ROSCS (A7NQB7 ), PDXT_ROSS1 (A5UY93 ), PDXT_RUBXD (Q1AWE7 ), PDXT_RUMCH (B8I364 ), PDXT_SACEN (A4FBA2 ), PDXT_SACS2 (Q9UWX4 ), PDXT_SALAI (A8LWZ5 ), PDXT_SALTO (A4X5V4 ), PDXT_SOLUE (Q02CB5 ), PDXT_STAA1 (A7WYT2 ), PDXT_STAA2 (A6TYZ6 ), PDXT_STAA3 (Q2FJC0 ), PDXT_STAA8 (Q2G0Q0 ), PDXT_STAA9 (A5IQ73 ), PDXT_STAAB (Q2YSE1 ), PDXT_STAAC (Q5HIF4 ), PDXT_STAAE (A6QEH2 ), PDXT_STAAM (Q99W83 ), PDXT_STAAN (Q7A7A1 ), PDXT_STAAR (Q6GJE9 ), PDXT_STAAS (Q6GBW8 ), PDXT_STAAT (A8YZL6 ), PDXT_STAAW (Q7A1R6 ), PDXT_STACT (B9DKX8 ), PDXT_STAEQ (Q5HRN4 ), PDXT_STAES (Q8CQV8 ), PDXT_STAHJ (Q4L3H9 ), PDXT_STAMF (A3DM32 ), PDXT_STAS1 (Q49V29 ), PDXT_STRAW (Q81ZV5 ), PDXT_STRCO (Q9L287 ), PDXT_STRGG (B1W3G0 ), PDXT_STRP2 (Q04JN6 ), PDXT_STRP4 (B5E5W0 ), PDXT_STRP7 (C1C862 ), PDXT_STRPI (B1ICP8 ), PDXT_STRPJ (B8ZL13 ), PDXT_STRPN (Q97PX3 ), PDXT_STRPS (B2IQT4 ), PDXT_STRR6 (Q8DP72 ), PDXT_STRZJ (C1CF49 ), PDXT_STRZP (C1CLG6 ), PDXT_STRZT (C1CQQ1 ), PDXT_SULAC (Q4J8L2 ), PDXT_SULIA (C3N6C7 ), PDXT_SULIK (C4KHU2 ), PDXT_SULIL (C3MQK7 ), PDXT_SULIM (C3MW85 ), PDXT_SULIN (C3NGV9 ), PDXT_SULIY (C3NET5 ), PDXT_SULTO (Q971B2 ), PDXT_THEAB (B7IEZ6 ), PDXT_THEAC (Q9HM60 ), PDXT_THEFY (Q47N39 ), PDXT_THEGJ (C5A4H0 ), PDXT_THEKO (Q5JFR2 ), PDXT_THEM4 (A6LP41 ), PDXT_THEMA (Q9WYU3 ), PDXT_THENN (B9KBI1 ), PDXT_THEON (B6YVQ8 ), PDXT_THEP1 (A5IJU9 ), PDXT_THEP3 (B0KAS0 ), PDXT_THEPX (B0K4N6 ), PDXT_THESQ (B1L921 ), PDXT_THET2 (Q72KF8 ), PDXT_THET8 (Q5SKD6 ), PDXT_THEVO (Q97CP5 ), PDXT_TROW8 (Q83HM6 ), PDXT_TROWT (Q83GK3 ), SNO1_YEAST (Q03144 ), SNO2_YEAST (P53823 ), SNO3_YEAST (P43544 ), YFM8_SCHPO (Q9UTE4 )» more
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| UniProtKB/Swiss-Prot False negative sequences |
11 sequences
PDXT_CHLAD (B8G664 ), PDXT_CORJK (Q4JVD5 ), PDXT_HALLT (B9LSC8 ), PDXT_KOSOT (C5CG73 ), PDXT_METS3 (A5UK48 ), PDXT_METST (Q2NGI4 ), PDXT_METTH (O26292 ), PDXT_NATPD (Q3IU60 ), PDXT_PYRCJ (A3MSM9 ), PDXT_PYRIL (A1RU67 ), PDXT_SYNAS (Q2LXR3 )» more |
| PDB [Detailed view] |
10 PDB
1Q7R; 1R9G; 2ABW; 2ISS; 2NV0; 2NV2; 2YWD; 2YWJ; 4ADS; 4WXY |