PROSITE entry PS01236
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General information about the entry
Entry name [info] | PDXT_SNO_1 |
Accession [info] | PS01236 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1997 CREATED;
01-APR-2006 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00950 |
Name and characterization of the entry
Description [info] | PdxT/SNO family family signature. |
Pattern [info] |
[GARVS]-[LVI]-[ILAV]-[LIVF]-P-G-G-E-S-[TS]-[STAV]. |
Numerical results [info]
Total number of hits | 241 in 241 different sequences |
Number of true positive hits | 241 in 241 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 11 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 95.63 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 2 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
241 sequences
PDX2_ARATH (Q8LAD0), PDX2_DICDI (Q54J48), PDX2_PLABE (Q4PJX5), PDX2_PLAF7 (Q8IIK4), PDXT_ACIC1 (A0LUK9), PDXT_ACTP2 (A3MZT9), PDXT_ACTP7 (B3GXB7), PDXT_ACTPJ (B0BUD1), PDXT_AERPE (Q9YFK4), PDXT_ALKCK (Q5WKW1), PDXT_ANOFW (B7GFL9), PDXT_ARCFU (O29741), PDXT_ARTS2 (A0JXB5), PDXT_AZOPC (B6YQU3), PDXT_BACAA (C3P8Q4), PDXT_BACAC (C3LIY8), PDXT_BACAH (A0R890), PDXT_BACAN (Q81W26), PDXT_BACC0 (B7JJC7), PDXT_BACC1 (Q73FJ4), PDXT_BACC2 (B7IS30), PDXT_BACC3 (C1ES18), PDXT_BACC4 (B7HII4), PDXT_BACC7 (B7HPS7), PDXT_BACCN (A7GJS9), PDXT_BACCQ (B9IYH9), PDXT_BACCR (Q81JC5), PDXT_BACCZ (Q63HF7), PDXT_BACHK (Q6HQ04), PDXT_BACLD (Q65PL1), PDXT_BACMK (A9VMA0), PDXT_BACP2 (A8FAD6), PDXT_BACSU (P37528), PDXT_BACVZ (A7Z0D4), PDXT_BIFAA (A1A3A4), PDXT_BIFLO (Q8G575), PDXT_BREBN (C0ZH53), PDXT_CALBD (B9MKY8), PDXT_CALMQ (A8MAY1), PDXT_CALS4 (Q8RBJ4), PDXT_CALS8 (A4XIB6), PDXT_CARHZ (Q3A8Q0), PDXT_CENSY (A0RTP4), PDXT_CHLAA (A9WFU0), PDXT_CHLSY (B9LIK4), PDXT_CLAM3 (A5CS10), PDXT_CLAMS (B0REB6), PDXT_CLOAB (Q97LG6), PDXT_CLOB8 (A6M3G5), PDXT_CLOBM (B1KYX4), PDXT_CLOK1 (B9E3V5), PDXT_CLOK5 (A5MZY0), PDXT_CORDI (Q6NK10), PDXT_CORGB (A4QCC4), PDXT_CORGL (Q8NS90), PDXT_CUTAK (Q6A947), PDXT_DEHM1 (Q3Z8V9), PDXT_DEHMB (A5FRL6), PDXT_DEHMC (Q3ZX06), PDXT_DEIGD (Q1IZC9), PDXT_DEIRA (Q9RUL8), PDXT_DESAP (B1I158), PDXT_DESHD (B8FZR4), PDXT_DESHY (Q24PK8), PDXT_DESRM (A4J0G0), PDXT_DICT6 (B5YF84), PDXT_DICTD (B8E120), PDXT_EXIS2 (B1YGC2), PDXT_FERNB (A7HNV0), PDXT_FRAAA (Q0RNV0), PDXT_FRACC (Q2JD98), PDXT_FRAP2 (B0TZ16), PDXT_FRASN (A8KZF0), PDXT_FRAT1 (Q14IU7), PDXT_FRATF (A7NDQ2), PDXT_FRATH (Q2A261), PDXT_FRATM (B2SDL4), PDXT_FRATN (A0Q5I2), PDXT_FRATO (Q0BKT3), PDXT_FRATT (Q5NHE5), PDXT_FRATW (A4IZB4), PDXT_GEOKA (Q5L3Y1), PDXT_GEOSE (P83813), PDXT_GEOSW (C5D338), PDXT_GEOTN (A4IJ95), PDXT_HAEDU (Q7VL87), PDXT_HAEI8 (Q4QJU4), PDXT_HAEIE (A5UBN1), PDXT_HAEIG (A5UF87), PDXT_HAEIN (P45294), PDXT_HALH5 (Q9KGN5), PDXT_HALMA (Q5UZW7), PDXT_HALS3 (B0R879), PDXT_HALSA (Q9HMD2), PDXT_HALWD (Q18KL6), PDXT_HERA2 (A9B890), PDXT_HYPBU (A2BLL6), PDXT_IGNH4 (A8A8T7), PDXT_KINRD (A6WCI3), PDXT_KORCO (B1L4Z3), PDXT_KORVE (Q1IQH8), PDXT_LEIXX (Q6AFB8), PDXT_LISIN (Q929R8), PDXT_LISMC (C1KX54), PDXT_LISMF (Q71XR2), PDXT_LISMH (B8DH16), PDXT_LISMO (Q8Y5G1), PDXT_LISW6 (A0AKK9), PDXT_META3 (A6UWZ3), PDXT_METAC (Q8TQH7), PDXT_METAR (Q0W8A8), PDXT_METB6 (A7I472), PDXT_METBF (Q465J4), PDXT_METBU (Q12YR6), PDXT_METHJ (Q2FTH1), PDXT_METJA (Q59055), PDXT_METKA (Q8TWH2), PDXT_METLZ (A2SPK0), PDXT_METM5 (A4G0R6), PDXT_METM6 (A9A909), PDXT_METM7 (A6VHR9), PDXT_METMA (Q8PUA4), PDXT_METMJ (A3CRE5), PDXT_METMP (P0C036), PDXT_METPE (B8GE19), PDXT_METS5 (A4YI12), PDXT_METTP (A0B7N4), PDXT_METVS (A6UQT7), PDXT_MOOTA (Q2RMI9), PDXT_MYCA1 (A0QIC6), PDXT_MYCA9 (B1MCJ8), PDXT_MYCBO (Q7TY92), PDXT_MYCBP (A1KLV4), PDXT_MYCBT (C1AF75), PDXT_MYCLE (Q9CCT5), PDXT_MYCMM (B2HN48), PDXT_MYCPA (Q73WF2), PDXT_MYCS2 (A0QWH0), PDXT_MYCSJ (A3PYU8), PDXT_MYCSK (A1UF87), PDXT_MYCSS (Q1B9S6), PDXT_MYCTA (A5U5V5), PDXT_MYCTO (P9WII6), PDXT_MYCTU (P9WII7), PDXT_MYCUA (A0PSY6), PDXT_MYCVP (A1T876), PDXT_NIACI (Q8L1A7), PDXT_NITMS (A9A4S0), PDXT_NOCFA (Q5YTE0), PDXT_NOCSJ (A1SJA2), PDXT_OCEIH (Q8EN04), PDXT_OENOB (Q04F27), PDXT_PAEAT (A1R728), PDXT_PARUW (Q6MEN7), PDXT_PASMU (Q9CLJ5), PDXT_PELTS (A5D6D2), PDXT_PICTO (Q6L1R3), PDXT_PSECP (B8H9E0), PDXT_PSELT (A8F840), PDXT_PYRAB (Q9V0J6), PDXT_PYRAE (Q8ZUE9), PDXT_PYRAR (A4WHH5), PDXT_PYRFU (Q8TH23), PDXT_PYRHO (O59079), PDXT_PYRNV (B1YB90), PDXT_RENSM (A9WSE8), PDXT_RHOJR (Q0S1D2), PDXT_RHOOB (C1B4C5), PDXT_ROSCS (A7NQB7), PDXT_ROSS1 (A5UY93), PDXT_RUBXD (Q1AWE7), PDXT_RUMCH (B8I364), PDXT_SACEN (A4FBA2), PDXT_SACS2 (Q9UWX4), PDXT_SALAI (A8LWZ5), PDXT_SALTO (A4X5V4), PDXT_SOLUE (Q02CB5), PDXT_STAA1 (A7WYT2), PDXT_STAA2 (A6TYZ6), PDXT_STAA3 (Q2FJC0), PDXT_STAA8 (Q2G0Q0), PDXT_STAA9 (A5IQ73), PDXT_STAAB (Q2YSE1), PDXT_STAAC (Q5HIF4), PDXT_STAAE (A6QEH2), PDXT_STAAM (Q99W83), PDXT_STAAN (Q7A7A1), PDXT_STAAR (Q6GJE9), PDXT_STAAS (Q6GBW8), PDXT_STAAT (A8YZL6), PDXT_STAAW (Q7A1R6), PDXT_STACT (B9DKX8), PDXT_STAEQ (Q5HRN4), PDXT_STAES (Q8CQV8), PDXT_STAHJ (Q4L3H9), PDXT_STAMF (A3DM32), PDXT_STAS1 (Q49V29), PDXT_STRAW (Q81ZV5), PDXT_STRCO (Q9L287), PDXT_STRGG (B1W3G0), PDXT_STRP2 (Q04JN6), PDXT_STRP4 (B5E5W0), PDXT_STRP7 (C1C862), PDXT_STRPI (B1ICP8), PDXT_STRPJ (B8ZL13), PDXT_STRPN (Q97PX3), PDXT_STRPS (B2IQT4), PDXT_STRR6 (Q8DP72), PDXT_STRZJ (C1CF49), PDXT_STRZP (C1CLG6), PDXT_STRZT (C1CQQ1), PDXT_SULAC (Q4J8L2), PDXT_SULIA (C3N6C7), PDXT_SULIK (C4KHU2), PDXT_SULIL (C3MQK7), PDXT_SULIM (C3MW85), PDXT_SULIN (C3NGV9), PDXT_SULIY (C3NET5), PDXT_SULTO (Q971B2), PDXT_THEAB (B7IEZ6), PDXT_THEAC (Q9HM60), PDXT_THEFY (Q47N39), PDXT_THEGJ (C5A4H0), PDXT_THEKO (Q5JFR2), PDXT_THEM4 (A6LP41), PDXT_THEMA (Q9WYU3), PDXT_THENN (B9KBI1), PDXT_THEON (B6YVQ8), PDXT_THEP1 (A5IJU9), PDXT_THEP3 (B0KAS0), PDXT_THEPX (B0K4N6), PDXT_THESQ (B1L921), PDXT_THET2 (Q72KF8), PDXT_THET8 (Q5SKD6), PDXT_THEVO (Q97CP5), PDXT_TROW8 (Q83HM6), PDXT_TROWT (Q83GK3), SNO1_YEAST (Q03144), SNO2_YEAST (P53823), SNO3_YEAST (P43544), YFM8_SCHPO (Q9UTE4)» more
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UniProtKB/Swiss-Prot False negative sequences |
11 sequences
PDXT_CHLAD (B8G664), PDXT_CORJK (Q4JVD5), PDXT_HALLT (B9LSC8), PDXT_KOSOT (C5CG73), PDXT_METS3 (A5UK48), PDXT_METST (Q2NGI4), PDXT_METTH (O26292), PDXT_NATPD (Q3IU60), PDXT_PYRCJ (A3MSM9), PDXT_PYRIL (A1RU67), PDXT_SYNAS (Q2LXR3)» more |
PDB [Detailed view] |
10 PDB
1Q7R; 1R9G; 2ABW; 2ISS; 2NV0; 2NV2; 2YWD; 2YWJ; 4ADS; 4WXY |