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PROSITE entry PS01241


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General information about the entry

Entry name [info] LINK_1
Accession [info] PS01241
Entry type [info] PATTERN
Date [info] 01-FEB-1996 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00955

Name and characterization of the entry

Description [info] Link domain signature.
Pattern [info] 
C-x(15)-A-x(3,4)-[GK]-x(3)-C-x(2)-G-x(8,9)-P-x(7)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 102 in 56 different sequences
Number of true positive hits 102 in 56 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.08 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 4
Site [info] disulfide at position 1
Site [info] disulfide at position 7
Site [info] disulfide at position 13
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 56 sequences 

CD44_BOVIN  (Q29423), CD44_CANLF  (Q28284), CD44_CRIGR  (P20944), 

CD44_HORSE  (Q05078), CD44_HUMAN  (P16070), CD44_MESAU  (Q60522), 
CD44_MOUSE  (P15379), CD44_PAPHA  (P14745), CD44_RAT(P26051), 
CSPG2_BOVIN (P81282), CSPG2_CHICK (Q90953), CSPG2_HUMAN (P13611), 
CSPG2_MACNE (Q28858), CSPG2_MOUSE (Q62059), CSPG2_RAT   (Q9ERB4), 
HPLN1_BOVIN (P55252), HPLN1_CHICK (P07354), HPLN1_HORSE (Q28381), 
HPLN1_HUMAN (P10915), HPLN1_MOUSE (Q9QUP5), HPLN1_PIG   (P10859), 
HPLN1_RAT   (P03994), HPLN2_HUMAN (Q9GZV7), HPLN2_MOUSE (Q9ESM3), 
HPLN2_RAT   (Q9ESM2), HPLN3_HUMAN (Q96S86), HPLN3_MOUSE (Q80WM5), 
HPLN4_HUMAN (Q86UW8), HPLN4_MOUSE (Q80WM4), LYVE1_BOVIN (Q6UC88), 
LYVE1_MOUSE (Q8BHC0), NCAN_HUMAN  (O14594), NCAN_MOUSE  (P55066), 
NCAN_PANTR  (Q5IS41), NCAN_RAT(P55067), PGCA_BOVIN  (P13608), 
PGCA_CANLF  (Q28343), PGCA_CHICK  (P07898), PGCA_HUMAN  (P16112), 
PGCA_MOUSE  (Q61282), PGCA_PIG(Q29011), PGCA_RABIT  (Q28670), 
PGCA_RAT(P07897), PGCB_BOVIN  (Q28062), PGCB_FELCA  (P41725), 
PGCB_HUMAN  (Q96GW7), PGCB_MOUSE  (Q61361), PGCB_RAT(P55068), 
STAB1_HUMAN (Q9NY15), STAB1_MOUSE (Q8R4Y4), STAB2_HUMAN (Q8WWQ8), 
STAB2_MOUSE (Q8R4U0), STAB2_RAT   (Q8CFM6), TSG6_HUMAN  (P98066), 
TSG6_MOUSE  (O08859), TSG6_RABIT  (P98065)
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

LYVE1_HUMAN (Q9Y5Y7), SUSD5_HUMAN (O60279)


				
	

	

		PDB
[Detailed view]		
		
			60 PDB
			


			1O7B; 1O7C; 1POZ; 1UUH; 2I83; 2JCP; 2JCQ; 2JCR; 2N40; 2PF5; 4MRD; 4MRE; 
			
				4MRF; 4MRG; 4MRH; 4NP2; 4NP3; 4PZ3; 4PZ4; 5BZC; 5BZE; 5BZF; 5BZG; 5BZH; 
				5BZI; 5BZJ; 5BZK; 5BZL; 5BZM; 5BZN; 5BZO; 5BZP; 5BZQ; 5BZR; 5BZS; 5BZT; 
				5SBK; 5SBL; 5SBM; 5SBN; 5SBO; 5SBP; 5SBQ; 5SBR; 5SBS; 5SBT; 5SBU; 5SBV; 
				5SBW; 5SBX; 5SBY; 5SBZ; 5SC0; 5SC1; 5SC2; 5SC3; 5SC4; 5SC5; 5SC6; 5SC7
			
			

			» more