Home  |  Contact
Entry: PS01241

General information about the entry

Entry name [info] LINK_1
Accession [info] PS01241
Entry type [info] PATTERN
Date [info] 01-FEB-1996 CREATED;
01-DEC-2004 DATA UPDATE;
02-JUN-2021 INFO UPDATE.
PROSITE Doc. [info] PDOC00955

Name and characterization of the entry

Description [info] Link domain signature.
Pattern [info] 
C-x(15)-A-x(3,4)-[GK]-x(3)-C-x(2)-G-x(8,9)-P-x(7)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2021_03 which contains 565'254 sequence entries.


Total number of hits 102 in 56 different sequences
Number of true positive hits 102 in 56 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.08 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 4
Site [info] disulfide at position 1
Site [info] disulfide at position 7
Site [info] disulfide at position 13
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 56 sequences 

CD44_BOVIN  (Q29423    ), CD44_CANLF  (Q28284    ), CD44_CRIGR  (P20944    ), 

CD44_HORSE  (Q05078    ), CD44_HUMAN  (P16070    ), CD44_MESAU  (Q60522    ), 
CD44_MOUSE  (P15379    ), CD44_PAPHA  (P14745    ), CD44_RAT    (P26051    ), 
CSPG2_BOVIN (P81282    ), CSPG2_CHICK (Q90953    ), CSPG2_HUMAN (P13611    ), 
CSPG2_MACNE (Q28858    ), CSPG2_MOUSE (Q62059    ), CSPG2_RAT   (Q9ERB4    ), 
HPLN1_BOVIN (P55252    ), HPLN1_CHICK (P07354    ), HPLN1_HORSE (Q28381    ), 
HPLN1_HUMAN (P10915    ), HPLN1_MOUSE (Q9QUP5    ), HPLN1_PIG   (P10859    ), 
HPLN1_RAT   (P03994    ), HPLN2_HUMAN (Q9GZV7    ), HPLN2_MOUSE (Q9ESM3    ), 
HPLN2_RAT   (Q9ESM2    ), HPLN3_HUMAN (Q96S86    ), HPLN3_MOUSE (Q80WM5    ), 
HPLN4_HUMAN (Q86UW8    ), HPLN4_MOUSE (Q80WM4    ), LYVE1_BOVIN (Q6UC88    ), 
LYVE1_MOUSE (Q8BHC0    ), NCAN_HUMAN  (O14594    ), NCAN_MOUSE  (P55066    ), 
NCAN_PANTR  (Q5IS41    ), NCAN_RAT    (P55067    ), PGCA_BOVIN  (P13608    ), 
PGCA_CANLF  (Q28343    ), PGCA_CHICK  (P07898    ), PGCA_HUMAN  (P16112    ), 
PGCA_MOUSE  (Q61282    ), PGCA_PIG    (Q29011    ), PGCA_RABIT  (Q28670    ), 
PGCA_RAT    (P07897    ), PGCB_BOVIN  (Q28062    ), PGCB_FELCA  (P41725    ), 
PGCB_HUMAN  (Q96GW7    ), PGCB_MOUSE  (Q61361    ), PGCB_RAT    (P55068    ), 
STAB1_HUMAN (Q9NY15    ), STAB1_MOUSE (Q8R4Y4    ), STAB2_HUMAN (Q8WWQ8    ), 
STAB2_MOUSE (Q8R4U0    ), STAB2_RAT   (Q8CFM6    ), TSG6_HUMAN  (P98066    ), 
TSG6_MOUSE  (O08859    ), TSG6_RABIT  (P98065    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

LYVE1_HUMAN (Q9Y5Y7    ), SUSD5_HUMAN (O60279    )


				
	

	

		PDB
[Detailed view]		
		
			36 PDB
			


			1O7B; 1O7C; 1POZ; 1UUH; 2I83; 2JCP; 2JCQ; 2JCR; 2N40; 2PF5; 4MRD; 4MRE; 
			
				4MRF; 4MRG; 4MRH; 4NP2; 4NP3; 4PZ3; 4PZ4; 5BZC; 5BZE; 5BZF; 5BZG; 5BZH; 
				5BZI; 5BZJ; 5BZK; 5BZL; 5BZM; 5BZN; 5BZO; 5BZP; 5BZQ; 5BZR; 5BZS; 5BZT
			
			

			» more

				
	





View entry in original PROSITE format


View entry in raw text format (no links)


Direct ScanProsite submission