![]() |
|
Entry: PS01248 |
Entry name [info] | EGF_LAM_1 |
Accession [info] | PS01248 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1997 CREATED;
01-NOV-1997 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00961 |
Description [info] | Laminin-type EGF-like (LE) domain signature. |
Pattern [info] |
C-x(1,2)-C-x(5)-G-x(2)-C-x(2)-C-x(3,4)-[FYW]-x(3,15)-C. |
Total number of hits | 566 in 134 different sequences |
Number of true positive hits | 526 in 94 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 40 in 40 different sequences |
Number of false negative sequences | 1 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 92.93 % |
Recall (true positives / (true positives + false negatives)) | 99.81 % |
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 21 |
Site [info] | disulfide at position 1 |
Site [info] | disulfide at position 3 |
Site [info] | disulfide at position 7 |
Site [info] | disulfide at position 9 |
Site [info] | disulfide at position 13 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
94 sequences
AGRIN_CHICK (P31696 ), AGRIN_DIPOM (Q90404 ), AGRIN_HUMAN (O00468 ), AGRIN_MOUSE (A2ASQ1 ), AGRIN_RAT (P25304 ), ATRN1_HUMAN (Q5VV63 ), ATRN1_MOUSE (Q6A051 ), ATRN_HUMAN (O75882 ), ATRN_MOUSE (Q9WU60 ), ATRN_RAT (Q99J86 ), CELR1_HUMAN (Q9NYQ6 ), CELR1_MOUSE (O35161 ), CELR2_HUMAN (Q9HCU4 ), CELR2_MOUSE (Q9R0M0 ), CELR2_RAT (Q9QYP2 ), CELR3_HUMAN (Q9NYQ7 ), CELR3_MOUSE (Q91ZI0 ), CELR3_RAT (O88278 ), CREL1_CAEEL (Q19267 ), EPI1_CAEEL (Q21313 ), LAM2_CAEEL (Q18823 ), LAMA1_HUMAN (P25391 ), LAMA1_MOUSE (P19137 ), LAMA2_HUMAN (P24043 ), LAMA2_MOUSE (Q60675 ), LAMA3_HUMAN (Q16787 ), LAMA3_MOUSE (Q61789 ), LAMA4_HUMAN (Q16363 ), LAMA4_MOUSE (P97927 ), LAMA5_HUMAN (O15230 ), LAMA5_MOUSE (Q61001 ), LAMA_DROME (Q00174 ), LAMB1_CHICK (Q01635 ), LAMB1_DROME (P11046 ), LAMB1_HUMAN (P07942 ), LAMB1_HYDVU (Q27262 ), LAMB1_MOUSE (P02469 ), LAMB2_HUMAN (P55268 ), LAMB2_MOUSE (Q61292 ), LAMB2_RAT (P15800 ), LAMB3_HUMAN (Q13751 ), LAMB3_MOUSE (Q61087 ), LAMB4_DANRE (Q8JHV6 ), LAMB4_HUMAN (A4D0S4 ), LAMB_HIRME (Q25092 ), LAMC1_DANRE (Q1LVF0 ), LAMC1_DROME (P15215 ), LAMC1_HUMAN (P11047 ), LAMC1_MOUSE (P02468 ), LAMC1_XENTR (A0JP86 ), LAMC2_HORSE (Q8HZI9 ), LAMC2_HUMAN (Q13753 ), LAMC2_MOUSE (Q61092 ), LAMC3_HUMAN (Q9Y6N6 ), LAMC3_MOUSE (Q9R0B6 ), MEGF8_HUMAN (Q7Z7M0 ), MEGF8_MOUSE (P60882 ), MEGF8_RAT (Q9QYP0 ), MEGF9_HUMAN (Q9H1U4 ), MEGF9_MOUSE (Q8BH27 ), NET1_CHICK (Q90922 ), NET1_HUMAN (O95631 ), NET1_MOUSE (O09118 ), NET1_PIG (Q2HXW4 ), NET1_RAT (Q924Z9 ), NET3_CHICK (Q90923 ), NET3_HUMAN (O00634 ), NET3_MOUSE (Q9R1A3 ), NET4_HUMAN (Q9HB63 ), NET4_MOUSE (Q9JI33 ), NET4_PONAB (Q5RB89 ), NET5_HUMAN (Q8WTR8 ), NET5_MOUSE (Q3UQ22 ), NET5_RAT (D3ZT86 ), NETA_DROME (Q24567 ), NETB_DROME (Q24568 ), NTNG1_HUMAN (Q9Y2I2 ), NTNG1_MOUSE (Q8R4G0 ), NTNG2_HUMAN (Q96CW9 ), NTNG2_MOUSE (Q8R4F1 ), PGBM_HUMAN (P98160 ), PGBM_MOUSE (Q05793 ), STAB1_HUMAN (Q9NY15 ), STAB1_MOUSE (Q8R4Y4 ), STAB2_HUMAN (Q8WWQ8 ), STAB2_MOUSE (Q8R4U0 ), STAB2_RAT (Q8CFM6 ), STAN_DROME (Q9V5N8 ), TAG53_CAEEL (Q19981 ), UNC52_CAEEL (Q06561 ), UNC6_CAEEL (P34710 ), USH2A_HUMAN (O75445 ), USH2A_MOUSE (Q2QI47 ), USH2A_RAT (Q8K3K1 )» more
|
UniProtKB/Swiss-Prot False negative sequences |
1 sequence
SIGK_DICDI (Q6TMJ6 ) |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
LAMBV_CHICK (Q01636 ) |
UniProtKB/Swiss-Prot False positive sequences |
40 sequences
ADP1_YEAST (P25371 ), CRE2A_XENLA (Q5XH36 ), CRE2B_XENLA (Q4V7M2 ), CREL1_BOVIN (Q5EA46 ), CREL1_HUMAN (Q96HD1 ), CREL1_MOUSE (Q91XD7 ), CREL1_RAT (Q4V7F2 ), CREL2_BOVIN (Q2KIT5 ), CREL2_CRIGR (Q60438 ), CREL2_DANRE (Q7SXF6 ), CREL2_HUMAN (Q6UXH1 ), CREL2_MOUSE (Q9CYA0 ), CREL2_RAT (Q4G063 ), POL_COYMV (P19199 ), SRCH_HUMAN (P23327 ), SRCH_RABIT (P16230 ), TYRO_BOVIN (Q8MIU0 ), TYRO_CANLF (P54834 ), TYRO_CHICK (P55024 ), TYRO_COTJA (Q08410 ), TYRO_GORGO (Q9BDE0 ), TYRO_HUMAN (P14679 ), TYRO_MOUSE (P11344 ), TYRO_ORYLA (P55025 ), TYRO_PELNI (Q04604 ), TYRO_PELSI (P55026 ), TYRP1_AMBME (P55027 ), TYRP1_BOVIN (Q8WN57 ), TYRP1_CARAU (P55028 ), TYRP1_CHICK (O57405 ), TYRP1_HUMAN (P17643 ), TYRP1_MOUSE (P07147 ), TYRP2_BOVIN (Q95119 ), TYRP2_CHICK (O93505 ), TYRP2_HUMAN (P40126 ), TYRP2_MOUSE (P29812 ), TYRP2_PIG (Q4R1H1 ), WDR59_CHICK (Q5ZLG9 ), WDR59_HUMAN (Q6PJI9 ), WDR59_MOUSE (Q8C0M0 )» more |
PDB [Detailed view] |
14 PDB
1KLO; 1NPE; 1TLE; 2Y38; 4AQS; 4AQT; 4OVE; 4PLM; 4PLN; 4PLO; 4URT; 4WNX; 5LF2; 6FKQ » more |