PROSITE entry PS01261
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General information about the entry
| Entry name [info] | UPF0020 |
| Accession [info] | PS01261 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-NOV-1997 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00969 |
Name and characterization of the entry
| Description [info] | Uncharacterized protein family UPF0020 signature. |
| Pattern [info] |
D-P-[LIVMF]-C-G-[ST]-G-x(3)-[LI]-E. |
Numerical results [info]
| Total number of hits | 152 in 152 different sequences |
| Number of true positive hits | 152 in 152 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 28 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 84.44 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
152 sequences
RLMKL_ACIAD (Q6FCR7), RLMKL_ACIBC (B2HWX8), RLMKL_ACIBS (B0VLH0), RLMKL_ACIBY (B0VAL5), RLMKL_ACTP2 (A3MYD2), RLMKL_ACTP7 (B3GZQ0), RLMKL_ACTPJ (B0BRL8), RLMKL_ACTSZ (A6VMR3), RLMKL_AERS4 (A4SME4), RLMKL_ALCBS (Q0VQU5), RLMKL_ALIF1 (Q5E5B4), RLMKL_ALIFM (B5FE19), RLMKL_ALISL (B6ELD3), RLMKL_ALKEH (Q0A793), RLMKL_ALLVD (Q1W3E0), RLMKL_BUCAI (P57444), RLMKL_BUCAP (Q8K9I4), RLMKL_CITK8 (A8AID1), RLMKL_COLP3 (Q47Z09), RLMKL_CROS8 (A7MEX5), RLMKL_DESPS (Q6AQA5), RLMKL_ECO24 (A7ZK52), RLMKL_ECO57 (Q8XDB2), RLMKL_ECO5E (B5YT79), RLMKL_ECODH (B1X8Q2), RLMKL_ECOHS (A7ZYQ0), RLMKL_ECOK1 (A1A9L8), RLMKL_ECOL5 (Q0TJB3), RLMKL_ECOL6 (Q8FJ88), RLMKL_ECOLC (B1IVY4), RLMKL_ECOLI (P75864), RLMKL_ECOSM (B1LJR4), RLMKL_ECOUT (Q1RDR6), RLMKL_ENT38 (A4W8W0), RLMKL_ERWT9 (B2VDF6), RLMKL_FRAP2 (B0U0U4), RLMKL_FRAT1 (Q14HS5), RLMKL_FRATF (A7NCY2), RLMKL_FRATH (Q2A2U4), RLMKL_FRATM (B2SGG3), RLMKL_FRATN (A0Q621), RLMKL_FRATO (Q0BLC3), RLMKL_FRATT (Q5NGC3), RLMKL_FRATW (A4IXN4), RLMKL_HAEDU (Q7VP04), RLMKL_HAEI8 (Q4QP66), RLMKL_HAEIE (A5UB28), RLMKL_HAEIG (A5UFS2), RLMKL_HAEIN (P44524), RLMKL_HISS1 (Q0I4C6), RLMKL_HISS2 (B0UUM5), RLMKL_IDILO (Q5QX63), RLMKL_KLEP3 (B5XY56), RLMKL_KLEP7 (A6T742), RLMKL_LEGPA (Q5X969), RLMKL_LEGPC (A5I9H3), RLMKL_LEGPH (Q5ZZI8), RLMKL_LEGPL (Q5X0J6), RLMKL_MAGMM (A0L8B5), RLMKL_MANSM (Q65UK6), RLMKL_PASMU (Q9CNW9), RLMKL_PECAS (Q6D459), RLMKL_PHOLL (Q7N612), RLMKL_PHOPR (Q6LRA0), RLMKL_PROMH (B4EVC6), RLMKL_PSYA2 (Q4FTN9), RLMKL_PSYCK (Q1QCP8), RLMKL_PSYIN (A1SX09), RLMKL_PSYWF (A5WGC0), RLMKL_SACD2 (Q21JW7), RLMKL_SALA4 (B5F1U5), RLMKL_SALAR (A9MHU0), RLMKL_SALCH (Q57QU1), RLMKL_SALDC (B5FQZ1), RLMKL_SALEP (B5QZF1), RLMKL_SALG2 (B5R6B4), RLMKL_SALHS (B4TDY8), RLMKL_SALNS (B4T1Z1), RLMKL_SALPA (Q5PGE3), RLMKL_SALPB (A9N6Y0), RLMKL_SALPK (B5BBL9), RLMKL_SALSV (B4TRX1), RLMKL_SALTI (Q8Z7S6), RLMKL_SALTY (Q8ZQ73), RLMKL_SERP5 (A8GCK7), RLMKL_SHEAM (A1S601), RLMKL_SHEB5 (A3D5Q0), RLMKL_SHEB8 (A6WPK6), RLMKL_SHEB9 (A9L591), RLMKL_SHEDO (Q12LC6), RLMKL_SHEFN (Q07ZR3), RLMKL_SHEHH (B0TIX7), RLMKL_SHELP (A3QDY0), RLMKL_SHEON (Q8EFW4), RLMKL_SHEPA (A8H3Y1), RLMKL_SHEPC (A4Y5X4), RLMKL_SHESA (A0KVL6), RLMKL_SHESH (A8FW59), RLMKL_SHESM (Q0HJZ9), RLMKL_SHESR (Q0HWA0), RLMKL_SHESW (A1RKM2), RLMKL_SHEWM (B1KDN0), RLMKL_SHIB3 (B2TUD1), RLMKL_SHIBS (Q31YL1), RLMKL_SHIDS (Q32HV8), RLMKL_SHIF8 (Q0T686), RLMKL_SHIFL (Q83RX5), RLMKL_SHISS (Q3Z3H3), RLMKL_SODGM (Q2NU80), RLMKL_STRM5 (B4SQ79), RLMKL_STRMK (B2FJ58), RLMKL_SYNC1 (Q3A2U5), RLMKL_VIBC1 (A7N0M8), RLMKL_VIBC3 (A5F836), RLMKL_VIBCH (Q9KRZ5), RLMKL_VIBPA (Q87PC0), RLMKL_VIBVY (Q7MKX1), RLMKL_XANAC (Q8PM40), RLMKL_XANC5 (Q3BV47), RLMKL_XANC8 (Q4UT85), RLMKL_XANCB (B0RV07), RLMKL_XANCP (Q8PAE0), RLMKL_XANOM (Q2P309), RLMKL_XANOP (B2SIS8), RLMKL_XANOR (Q5H029), RLMKL_XYLF2 (B2IA87), RLMKL_XYLFA (Q9PA69), RLMKL_XYLFM (B0U5Z5), RLMKL_XYLFT (Q87A16), RLMKL_YERE8 (A1JMQ6), RLMKL_YERP3 (A7FJT9), RLMKL_YERPA (Q1CA41), RLMKL_YERPB (B2JYS1), RLMKL_YERPE (Q7CHK7), RLMKL_YERPG (A9R7L5), RLMKL_YERPN (Q1CGJ3), RLMKL_YERPP (A4TMZ0), RLMKL_YERPS (Q66CG1), RLMKL_YERPY (B1JQR7), RLML_NEIMB (Q9K0V4), THUM3_BOVIN (Q2T9W2), THUM3_HUMAN (Q9BV44), THUM3_MOUSE (P97770), TMG10_ARCFU (O29011), TMG10_METJA (Q58120), TMG10_METTH (O26820), TMG10_METTL (P05409), TRM14_ARCFU (O28105), TRM14_METJA (Q57880), TRM14_PYRFU (Q8U248), Y064_SYNY3 (Q55156), YPSC_BACSU (P50840)» more
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| UniProtKB/Swiss-Prot False negative sequences |
28 sequences
RLMKL_AERHH (A0KKK7), RLMKL_ALTMD (B4RZ48), RLMKL_CELJU (B3PIL6), RLMKL_CHRSD (Q1QXV9), RLMKL_DICNV (A5EX48), RLMKL_HAHCH (Q2SCH1), RLMKL_HYDCU (Q31IC8), RLMKL_MARMS (A6VW36), RLMKL_MARN8 (A1TZG2), RLMKL_METCA (Q60AX5), RLMKL_PSE14 (Q48JX8), RLMKL_PSEA6 (Q15UB5), RLMKL_PSEA7 (A6V328), RLMKL_PSEAE (Q9HZG0), RLMKL_PSEE4 (Q1ICL2), RLMKL_PSEF5 (Q4KFI6), RLMKL_PSEMY (A4XWP8), RLMKL_PSEP1 (A5W6K7), RLMKL_PSEPF (Q3KFC5), RLMKL_PSEPG (B0KG92), RLMKL_PSEPK (Q88L39), RLMKL_PSEPW (B1J5B7), RLMKL_PSESM (Q883N9), RLMKL_PSET1 (Q3IGZ3), RLMKL_PSEU2 (Q4ZUM1), RLMKL_STUS1 (A4VM39), TMG10_PYRAB (Q9UY84), TRMN_THET2 (Q72IH5)» more |
| PDB [Detailed view] |
8 PDB
3TLJ; 3TM4; 3TM5; 3V8V; 3V97; 6ZXV; 6ZXW; 6ZXY |