Home  |  Contact
Entry: PS01261

General information about the entry

Entry name [info] UPF0020
Accession [info] PS01261
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-NOV-1997 DATA UPDATE;
22-APR-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00969

Name and characterization of the entry

Description [info] Uncharacterized protein family UPF0020 signature.
Pattern [info] 
D-P-[LIVMF]-C-G-[ST]-G-x(3)-[LI]-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_02 which contains 562'253 sequence entries.


Total number of hits 152 in 152 different sequences
Number of true positive hits 152 in 152 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 28
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 84.44 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 152 sequences 

RLMKL_ACIAD (Q6FCR7    ), RLMKL_ACIBC (B2HWX8    ), RLMKL_ACIBS (B0VLH0    ), 

RLMKL_ACIBY (B0VAL5    ), RLMKL_ACTP2 (A3MYD2    ), RLMKL_ACTP7 (B3GZQ0    ), 
RLMKL_ACTPJ (B0BRL8    ), RLMKL_ACTSZ (A6VMR3    ), RLMKL_AERS4 (A4SME4    ), 
RLMKL_ALCBS (Q0VQU5    ), RLMKL_ALIF1 (Q5E5B4    ), RLMKL_ALIFM (B5FE19    ), 
RLMKL_ALISL (B6ELD3    ), RLMKL_ALKEH (Q0A793    ), RLMKL_ALLVD (Q1W3E0    ), 
RLMKL_BUCAI (P57444    ), RLMKL_BUCAP (Q8K9I4    ), RLMKL_CITK8 (A8AID1    ), 
RLMKL_COLP3 (Q47Z09    ), RLMKL_CROS8 (A7MEX5    ), RLMKL_DESPS (Q6AQA5    ), 
RLMKL_ECO24 (A7ZK52    ), RLMKL_ECO57 (Q8XDB2    ), RLMKL_ECO5E (B5YT79    ), 
RLMKL_ECODH (B1X8Q2    ), RLMKL_ECOHS (A7ZYQ0    ), RLMKL_ECOK1 (A1A9L8    ), 
RLMKL_ECOL5 (Q0TJB3    ), RLMKL_ECOL6 (Q8FJ88    ), RLMKL_ECOLC (B1IVY4    ), 
RLMKL_ECOLI (P75864    ), RLMKL_ECOSM (B1LJR4    ), RLMKL_ECOUT (Q1RDR6    ), 
RLMKL_ENT38 (A4W8W0    ), RLMKL_ERWT9 (B2VDF6    ), RLMKL_FRAP2 (B0U0U4    ), 
RLMKL_FRAT1 (Q14HS5    ), RLMKL_FRATF (A7NCY2    ), RLMKL_FRATH (Q2A2U4    ), 
RLMKL_FRATM (B2SGG3    ), RLMKL_FRATN (A0Q621    ), RLMKL_FRATO (Q0BLC3    ), 
RLMKL_FRATT (Q5NGC3    ), RLMKL_FRATW (A4IXN4    ), RLMKL_HAEDU (Q7VP04    ), 
RLMKL_HAEI8 (Q4QP66    ), RLMKL_HAEIE (A5UB28    ), RLMKL_HAEIG (A5UFS2    ), 
RLMKL_HAEIN (P44524    ), RLMKL_HAES1 (Q0I4C6    ), RLMKL_HISS2 (B0UUM5    ), 
RLMKL_IDILO (Q5QX63    ), RLMKL_KLEP3 (B5XY56    ), RLMKL_KLEP7 (A6T742    ), 
RLMKL_LEGPA (Q5X969    ), RLMKL_LEGPC (A5I9H3    ), RLMKL_LEGPH (Q5ZZI8    ), 
RLMKL_LEGPL (Q5X0J6    ), RLMKL_MAGMM (A0L8B5    ), RLMKL_MANSM (Q65UK6    ), 
RLMKL_PASMU (Q9CNW9    ), RLMKL_PECAS (Q6D459    ), RLMKL_PELCD (Q3A2U5    ), 
RLMKL_PHOLL (Q7N612    ), RLMKL_PHOPR (Q6LRA0    ), RLMKL_PROMH (B4EVC6    ), 
RLMKL_PSYA2 (Q4FTN9    ), RLMKL_PSYCK (Q1QCP8    ), RLMKL_PSYIN (A1SX09    ), 
RLMKL_PSYWF (A5WGC0    ), RLMKL_SACD2 (Q21JW7    ), RLMKL_SALA4 (B5F1U5    ), 
RLMKL_SALAR (A9MHU0    ), RLMKL_SALCH (Q57QU1    ), RLMKL_SALDC (B5FQZ1    ), 
RLMKL_SALEP (B5QZF1    ), RLMKL_SALG2 (B5R6B4    ), RLMKL_SALHS (B4TDY8    ), 
RLMKL_SALNS (B4T1Z1    ), RLMKL_SALPA (Q5PGE3    ), RLMKL_SALPB (A9N6Y0    ), 
RLMKL_SALPK (B5BBL9    ), RLMKL_SALSV (B4TRX1    ), RLMKL_SALTI (Q8Z7S6    ), 
RLMKL_SALTY (Q8ZQ73    ), RLMKL_SERP5 (A8GCK7    ), RLMKL_SHEAM (A1S601    ), 
RLMKL_SHEB5 (A3D5Q0    ), RLMKL_SHEB8 (A6WPK6    ), RLMKL_SHEB9 (A9L591    ), 
RLMKL_SHEDO (Q12LC6    ), RLMKL_SHEFN (Q07ZR3    ), RLMKL_SHEHH (B0TIX7    ), 
RLMKL_SHELP (A3QDY0    ), RLMKL_SHEON (Q8EFW4    ), RLMKL_SHEPA (A8H3Y1    ), 
RLMKL_SHEPC (A4Y5X4    ), RLMKL_SHESA (A0KVL6    ), RLMKL_SHESH (A8FW59    ), 
RLMKL_SHESM (Q0HJZ9    ), RLMKL_SHESR (Q0HWA0    ), RLMKL_SHESW (A1RKM2    ), 
RLMKL_SHEWM (B1KDN0    ), RLMKL_SHIB3 (B2TUD1    ), RLMKL_SHIBS (Q31YL1    ), 
RLMKL_SHIDS (Q32HV8    ), RLMKL_SHIF8 (Q0T686    ), RLMKL_SHIFL (Q83RX5    ), 
RLMKL_SHISS (Q3Z3H3    ), RLMKL_SODGM (Q2NU80    ), RLMKL_STRM5 (B4SQ79    ), 
RLMKL_STRMK (B2FJ58    ), RLMKL_VIBC3 (A5F836    ), RLMKL_VIBCB (A7N0M8    ), 
RLMKL_VIBCH (Q9KRZ5    ), RLMKL_VIBPA (Q87PC0    ), RLMKL_VIBVY (Q7MKX1    ), 
RLMKL_XANAC (Q8PM40    ), RLMKL_XANC5 (Q3BV47    ), RLMKL_XANC8 (Q4UT85    ), 
RLMKL_XANCB (B0RV07    ), RLMKL_XANCP (Q8PAE0    ), RLMKL_XANOM (Q2P309    ), 
RLMKL_XANOP (B2SIS8    ), RLMKL_XANOR (Q5H029    ), RLMKL_XYLF2 (B2IA87    ), 
RLMKL_XYLFA (Q9PA69    ), RLMKL_XYLFM (B0U5Z5    ), RLMKL_XYLFT (Q87A16    ), 
RLMKL_YERE8 (A1JMQ6    ), RLMKL_YERP3 (A7FJT9    ), RLMKL_YERPA (Q1CA41    ), 
RLMKL_YERPB (B2JYS1    ), RLMKL_YERPE (Q7CHK7    ), RLMKL_YERPG (A9R7L5    ), 
RLMKL_YERPN (Q1CGJ3    ), RLMKL_YERPP (A4TMZ0    ), RLMKL_YERPS (Q66CG1    ), 
RLMKL_YERPY (B1JQR7    ), RLML_NEIMB  (Q9K0V4    ), THUM3_BOVIN (Q2T9W2    ), 
THUM3_HUMAN (Q9BV44    ), THUM3_MOUSE (P97770    ), TMG10_ARCFU (O29011    ), 
TMG10_METJA (Q58120    ), TMG10_METTH (O26820    ), TMG10_METTL (P05409    ), 
TRM14_ARCFU (O28105    ), TRM14_METJA (Q57880    ), TRM14_PYRFU (Q8U248    ), 
Y064_SYNY3  (Q55156    ), YPSC_BACSU  (P50840    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 28 sequences 

RLMKL_AERHH (A0KKK7    ), RLMKL_ALTMD (B4RZ48    ), RLMKL_CELJU (B3PIL6    ), 

RLMKL_CHRSD (Q1QXV9    ), RLMKL_DICNV (A5EX48    ), RLMKL_HAHCH (Q2SCH1    ), 
RLMKL_HYDCU (Q31IC8    ), RLMKL_MARHV (A1TZG2    ), RLMKL_MARMS (A6VW36    ), 
RLMKL_METCA (Q60AX5    ), RLMKL_PSE14 (Q48JX8    ), RLMKL_PSEA6 (Q15UB5    ), 
RLMKL_PSEA7 (A6V328    ), RLMKL_PSEAE (Q9HZG0    ), RLMKL_PSEE4 (Q1ICL2    ), 
RLMKL_PSEF5 (Q4KFI6    ), RLMKL_PSEHT (Q3IGZ3    ), RLMKL_PSEMY (A4XWP8    ), 
RLMKL_PSEP1 (A5W6K7    ), RLMKL_PSEPF (Q3KFC5    ), RLMKL_PSEPG (B0KG92    ), 
RLMKL_PSEPK (Q88L39    ), RLMKL_PSEPW (B1J5B7    ), RLMKL_PSESM (Q883N9    ), 
RLMKL_PSEU2 (Q4ZUM1    ), RLMKL_PSEU5 (A4VM39    ), TMG10_PYRAB (Q9UY84    ), 
TRMN_THET2  (Q72IH5    )
» more

PDB
[Detailed view]		 5 PDB

3TLJ; 3TM4; 3TM5; 3V8V; 3V97

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission