PROSITE entry PS01268
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General information about the entry
| Entry name [info] | UPF0024 |
| Accession [info] | PS01268 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-DEC-2004 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00975 |
Name and characterization of the entry
| Description [info] | Uncharacterized protein family UPF0024 signature. |
| Pattern [info] |
G-x-K-D-[KRAT]-x-[AG]-[LVRSIT]-[TKS]-x-Q-x-[LIVF]-[SGCYAT]. |
Numerical results [info]
| Total number of hits | 190 in 190 different sequences |
| Number of true positive hits | 190 in 190 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 11 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 94.53 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
190 sequences
PUS7_BOVIN (Q08DI8), PUS7_HUMAN (Q96PZ0), PUS7_MOUSE (Q91VU7), PUS7_SCHPO (O74343), PUS7_YEAST (Q08647), TRUD1_METJA (Q58008), TRUD1_METMP (Q6M1A3), TRUD2_METJA (Q58759), TRUD2_METMP (Q6LZL0), TRUD_ACTSZ (A6VR02), TRUD_AERHH (A0KGH7), TRUD_AERS4 (A4SRB7), TRUD_ALIF1 (Q5E330), TRUD_ALIFM (B5FAF5), TRUD_ALISL (B6EKL4), TRUD_ANAD2 (B8J7C8), TRUD_ANADE (Q2IFQ4), TRUD_ANADF (A7HGV2), TRUD_AQUAE (O67616), TRUD_ARCFU (O28596), TRUD_AZOVD (C1DSR9), TRUD_CAMJ8 (A8FNC4), TRUD_CAMJD (A7H5G6), TRUD_CAMJE (Q9PMK3), TRUD_CAMJJ (A1W165), TRUD_CAMJR (Q5HSX3), TRUD_CELJU (B3PJA9), TRUD_CHRSD (Q1QU75), TRUD_CITK8 (A8ANV9), TRUD_COLP3 (Q487E7), TRUD_CROS8 (A7MJ59), TRUD_DEIRA (Q9RSX8), TRUD_ECO24 (A7ZQI9), TRUD_ECO27 (B7UHG4), TRUD_ECO45 (B7MKL9), TRUD_ECO55 (B7LEG3), TRUD_ECO57 (Q8X7Y6), TRUD_ECO5E (B5Z3A7), TRUD_ECO7I (B7NT89), TRUD_ECO81 (B7MZ46), TRUD_ECO8A (B7LXF7), TRUD_ECOBW (C4ZZP9), TRUD_ECODH (B1XCS1), TRUD_ECOHS (A8A3M4), TRUD_ECOK1 (A1AET9), TRUD_ECOL5 (Q0TEB3), TRUD_ECOL6 (Q8FEJ7), TRUD_ECOLC (B1IUT4), TRUD_ECOLI (Q57261), TRUD_ECOLU (B7N6X5), TRUD_ECOSE (B6I6D5), TRUD_ECOSM (B1LQ65), TRUD_ECOUT (Q1R7U6), TRUD_EDWI9 (C5BGI9), TRUD_ENT38 (A4WDV0), TRUD_ERWT9 (B2VFZ5), TRUD_ESCF3 (B7LWL0), TRUD_GEODF (B9M644), TRUD_GEOMG (Q39R76), TRUD_GEOSL (P60347), TRUD_GEOSM (C6E4K4), TRUD_HAEI8 (Q4QML9), TRUD_HAEIE (A5UE25), TRUD_HAEIN (P44039), TRUD_HALMA (Q5V1E6), TRUD_HALS3 (B0R2Y4), TRUD_HALSA (Q9HSG5), TRUD_HELAH (Q17WX3), TRUD_HELHP (P59892), TRUD_HELP2 (B6JME7), TRUD_HELPG (B5Z7T0), TRUD_HELPH (Q1CSU8), TRUD_HELPJ (Q9ZKS5), TRUD_HELPS (B2UU74), TRUD_HELPY (P55985), TRUD_HISS1 (Q0I5H8), TRUD_HISS2 (B0URU7), TRUD_IDILO (Q5QUC5), TRUD_KLEP3 (B5XV36), TRUD_KLEP7 (A6TD37), TRUD_LEGPA (Q5X4T2), TRUD_LEGPC (A5ICB9), TRUD_LEGPH (Q5ZV19), TRUD_LEGPL (Q5WWQ2), TRUD_LEPIC (Q72N01), TRUD_LEPIN (Q8F8N2), TRUD_MANSM (Q65Q80), TRUD_MARN8 (A1TZ52), TRUD_META3 (A6UV17), TRUD_METAC (Q8TKX2), TRUD_METBF (Q466V2), TRUD_METBU (Q12WH6), TRUD_METCA (Q604M0), TRUD_METKA (Q8TXJ7), TRUD_METM5 (A4FYL2), TRUD_METMA (Q8Q0M2), TRUD_METTH (O27572), TRUD_NANEQ (P60348), TRUD_NATPD (Q3IMF3), TRUD_NITOC (Q3JCS7), TRUD_NITSB (A6Q2U7), TRUD_PASMU (Q9CKK4), TRUD_PECAS (Q6D1B5), TRUD_PECCP (C6DDG0), TRUD_PHOLL (Q7N8K5), TRUD_PHOPR (Q6LMT5), TRUD_PICTO (Q6L1R2), TRUD_PROMH (B4F225), TRUD_PSE14 (Q48F86), TRUD_PSEA7 (A6V1G2), TRUD_PSEA8 (B7V8C2), TRUD_PSEAB (Q02R98), TRUD_PSEAE (Q9HY04), TRUD_PSEE4 (Q1I653), TRUD_PSEF5 (Q4KHE9), TRUD_PSEFS (C3K704), TRUD_PSEMY (A4XWR3), TRUD_PSEP1 (A5W822), TRUD_PSEPF (Q3KH85), TRUD_PSEPG (B0KSC6), TRUD_PSEPK (Q88MF2), TRUD_PSEPW (B1JB31), TRUD_PSESM (Q886L6), TRUD_PSEU2 (Q4ZWQ1), TRUD_PSYA2 (Q4FR14), TRUD_PYRAB (Q9V107), TRUD_PYRAE (Q8ZTR2), TRUD_PYRFU (Q8U0N1), TRUD_PYRHO (O59207), TRUD_PYRIL (A1RRV7), TRUD_PYRNV (B1Y9W7), TRUD_SACS2 (Q980V2), TRUD_SALA4 (B5F409), TRUD_SALAR (A9MF30), TRUD_SALCH (Q57KJ6), TRUD_SALDC (B5FTS3), TRUD_SALEP (B5QW16), TRUD_SALG2 (B5RDQ1), TRUD_SALHS (B4TFW5), TRUD_SALNS (B4T455), TRUD_SALPA (Q5PEG3), TRUD_SALPB (A9N2D1), TRUD_SALPC (C0PXA5), TRUD_SALPK (B5BEY2), TRUD_SALSV (B4TTV9), TRUD_SALTI (Q8Z473), TRUD_SALTY (Q8ZMF8), TRUD_SERP5 (A8G9Z4), TRUD_SHEON (Q8EBR4), TRUD_SHIB3 (B2TZI6), TRUD_SHIBS (Q31XA7), TRUD_SHIDS (Q32CI5), TRUD_SHIF8 (Q0T1H6), TRUD_SHIFL (Q83QE3), TRUD_SHISS (Q3YYB7), TRUD_STUS1 (A4VJV1), TRUD_SULTO (Q976I1), TRUD_SYNC1 (Q3A6I8), TRUD_THEAC (Q9HLL3), TRUD_THEGJ (C5A1W0), TRUD_THEKO (Q5JDB6), TRUD_THEON (B6YTE4), TRUD_THESM (C6A1K9), TRUD_THEVO (Q978K9), TRUD_VIBC1 (A7MTT9), TRUD_VIBC3 (A5F9D8), TRUD_VIBCH (Q9KUJ0), TRUD_VIBCM (C3LS20), TRUD_VIBPA (Q87LQ4), TRUD_VIBVU (Q8DC58), TRUD_VIBVY (Q7MHQ6), TRUD_WOLSU (P59893), TRUD_XANAC (Q8PLR6), TRUD_XANC5 (Q3BUS6), TRUD_XANC8 (Q4UTP6), TRUD_XANCB (B0RU01), TRUD_XANCP (Q8P9Y9), TRUD_XANOM (Q2P1L2), TRUD_XANOR (Q5GYK8), TRUD_YERE8 (A1JJT6), TRUD_YERP3 (A7FLX6), TRUD_YERPA (Q1C476), TRUD_YERPB (B2K579), TRUD_YERPE (Q8ZBP8), TRUD_YERPG (A9R117), TRUD_YERPN (Q1CLR4), TRUD_YERPP (A4TPZ9), TRUD_YERPS (Q66EC1), TRUD_YERPY (B1JJF6), YQ4B_CAEEL (Q17426)» more
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| UniProtKB/Swiss-Prot False negative sequences |
11 sequences
PUS7L_DANRE (Q1L8I0), PUS7L_HUMAN (Q9H0K6), PUS7L_MOUSE (Q8CE46), TRUD_HYDCU (Q31J61), TRUD_METVS (A6USB0), TRUD_PSEA6 (Q15P29), TRUD_PSET1 (Q3IDQ4), TRUD_PYRAR (A4WLG8), TRUD_SULDN (Q30RS1), TRUD_THET2 (Q72IG5), TRUD_THET8 (Q5SI49)» more |
| PDB [Detailed view] |
6 PDB
1SB7; 1SI7; 1SZW; 1Z2Z; 5KKP; 7MZV |