PROSITE entry PS01282
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General information about the entry
| Entry name [info] | BIR_REPEAT_1 |
| Accession [info] | PS01282 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1997 CREATED;
01-JUL-1998 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00987 |
Name and characterization of the entry
| Description [info] | BIR repeat. |
| Pattern [info] |
[HKEPILVY]-x(2)-R-x(3,7)-[FYW]-x(11,14)-[STAN]-G-[LMF]-x-[FYHDA]-x(4)- [DESL]-x(2,3)-C-x(2)-C-x(6)-[WA]-x(9)-H-x(4)-[PRSD]-x-C-x(2)-[LIVMA]. |
Numerical results [info]
| Total number of hits | 83 in 46 different sequences |
| Number of true positive hits | 83 in 46 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 27 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 75.45 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Eukaryotic viruses |
| Maximum number of repetitions [info] | 3 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
46 sequences
BIR1A_MOUSE (Q9QWK5 ), BIR1B_MOUSE (Q9QUK4 ), BIR1E_MOUSE (Q9R016 ), BIR1F_MOUSE (Q9JIB6 ), BIR1G_MOUSE (Q9JIB3 ), BIR7A_XENLA (Q8JHV9 ), BIR7B_XENLA (A9ULZ2 ), BIRC1_HUMAN (Q13075 ), BIRC2_HUMAN (Q13490 ), BIRC2_MOUSE (Q62210 ), BIRC3_CANLF (A1E2V0 ), BIRC3_HUMAN (Q13489 ), BIRC3_MOUSE (O08863 ), BIRC7_HUMAN (Q96CA5 ), BIRC7_MOUSE (A2AWP0 ), BIRC7_XENTR (A9JTP3 ), BIRC8_HUMAN (Q96P09 ), BIRC8_PANTR (Q95M72 ), BIR_CHICK (Q90660 ), DIAP1_DROME (Q24306 ), DIAP2_DROME (Q24307 ), IAP1_NPVAC (P41435 ), IAP1_NPVOP (O10296 ), IAP1_OSHVF (Q6R7I2 ), IAP3_NPVOP (P41437 ), IAPL_ASFC1 (P68764 ), IAPL_ASFC3 (O11451 ), IAPL_ASFCH (P68763 ), IAP_ASFB7 (P69180 ), IAP_ASFE1 (P69181 ), IAP_ASFE7 (P69182 ), IAP_ASFH8 (P69183 ), IAP_ASFK5 (P0C9X4 ), IAP_ASFL6 (P69184 ), IAP_ASFM1 (O11452 ), IAP_ASFM2 (O11453 ), IAP_ASFP4 (P0C9X5 ), IAP_ASFP5 (P68765 ), IAP_ASFWA (P0C9X6 ), IAP_GVCPM (P41436 ), PIAP_PIG (O62640 ), XIAP_HUMAN (P98170 ), XIAP_MOUSE (Q60989 ), XIAP_RAT (Q9R0I6 ), XIAP_XENLA (A5D8Q0 ), XIAP_XENTR (Q5BKL8 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
27 sequences
BI51A_XENLA (Q8JGN5 ), BI51B_XENLA (Q4R1J6 ), BI52A_XENLA (Q50L39 ), BI52B_XENLA (Q804H7 ), BIR1_SCHPO (O14064 ), BIR1_YEAST (P47134 ), BIR2_CAEEL (G5ECJ5 ), BIR51_XENTR (Q28H51 ), BIR52_XENTR (Q28ER3 ), BIRC5_BOVIN (Q6J1J1 ), BIRC5_CANLF (Q8I009 ), BIRC5_CAVPO (E3SCZ8 ), BIRC5_FELCA (Q6I6F4 ), BIRC5_HUMAN (O15392 ), BIRC5_MOUSE (O70201 ), BIRC5_PIG (Q9GLN5 ), BIRC5_PONAB (Q5RAH9 ), BIRC5_RAT (Q9JHY7 ), BIRC6_HUMAN (Q9NR09 ), BIRC6_MOUSE (O88738 ), BIRC8_GORGO (Q95M71 ), IAP2_NPVAC (P41454 ), IAP2_NPVOP (O10324 ), IAP2_OSHVF (Q6R7E2 ), IAP3_OSHVF (Q6R7D0 ), IAP4_OSHVF (Q6R7C4 ), VF193_IIV6 (P47732 )» more |
| PDB [Detailed view] |
111 PDB
1C9Q; 1F9X; 1G3F; 1G73; 1I3O; 1I4O; 1I51; 1JD4; 1JD5; 1JD6; 1KMC; 1NW9; 1OXN; 1OXQ; 1OY7; 1Q4Q; 1QBH; 1SDZ; 1SE0; 1TFQ; 1TFT; 1TW6; 1XB0; 1XB1; 2I3H; 2I3I; 2JK7; 2OPY; 2OPZ; 2POI; 2POP; 2QRA; 2UVL; 2VM5; 2VSL; 3CLX; 3CM2; 3CM7; 3D9T; 3D9U; 3EYL; 3F7G; 3F7H; 3F7I; 3G76; 3GT9; 3GTA; 3HL5; 3M0A; 3M0D; 3M1D; 3MUP; 3OZ1; 3SIP; 3SIQ; 3T6P; 3UW4; 3UW5; 4EB9; 4EC4; 4HY0; 4HY4; 4HY5; 4J3Y; 4J44; 4J45; 4J46; 4J47; 4J48; 4KJU; 4KJV; 4KMN; 4KMP; 4LGE; 4LGU; 4MTI; 4MTZ; 4MU7; 4OXC; 4WVS; 4WVT; 4WVU; 5C0K; 5C0L; 5C3H; 5C3K; 5C7A; 5C7B; 5C7C; 5C7D; 5C83; 5C84; 5M6E; 5M6F; 5M6H; 5M6L; 5M6M; 5M6N; 5OQW; 5YUD; 6B5B; 6EXW; 6EY2; 6GJW; 6QCI; 6W74; 6W7O; 6W8I; 7NK0; 7QGJ; 8AZA » more |