PROSITE logo
Due to maintenance work, this service will be unavailable from Mon Nov 11 17:30 until Tue Nov 12 09:00 CET. Apologies for the inconvenience.

PROSITE entry PS01284


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] TNASE_2
Accession [info] PS01284
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00865
Associated ProRule [info] PRU10049

Name and characterization of the entry

Description [info] Thermonuclease family signature 2.
Pattern [info]
[DT]-[KRP]-[YQ]-[GQ]-R-x-[LVY]-[GA]-x-[IV]-[FYW].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.


Total number of hits 27 in 27 different sequences
Number of true positive hits 27 in 27 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 69
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 28.12 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 5
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
27 sequences

CAN1_ARATH  (F4IZC5), CAN1_ORYSJ  (Q942N7), NUC_SHIFL   (P29769), 
NUC_STAAC   (Q5HHM4), NUC_STAAM   (Q99VJ0), NUC_STAAN   (Q7A6P2), 
NUC_STAAR   (Q6GIK1), NUC_STAAS   (Q6GB41), NUC_STAAU   (P00644), 
NUC_STAAW   (Q8NXI6), NUC_STAHY   (P43270), NUC_STAIN   (P43269), 
PARB4_ECOLX (P22997), SND1_BOVIN  (Q863B3), SND1_DANRE  (Q7ZT42), 
SND1_HUMAN  (Q7KZF4), SND1_MOUSE  (Q78PY7), SND1_PONAB  (Q5REU4), 
SND1_RAT(Q66X93), Y1296_HAEIN (Q57519), Y1439_METJA (Q58834), 
Y38K_CAPSE  (Q39635), Y6211_BACAN (Q9X397), YFI3_ECO57  (Q7BSX4), 
YFI3_ECOLX  (Q99342), YNCB_BACSU  (P94492), YOKF_BACSU  (O32001)
» more

UniProtKB/Swiss-Prot
False negative sequences
69 sequences

CAN2_ARATH  (F4IH31), CAN2_ORYSJ  (Q2RBJ2), CAN3_ORYSJ  (Q2QYR1), 
CAN4_ORYSJ  (Q2QUS0), HTP3_SAPPC  (A0A067CMC7), LCL3_AJEDR  (C5GB89), 
LCL3_ARTGP  (E4V094), LCL3_ARTOC  (C5FTB4), LCL3_ASPCL  (A1CRW4), 
LCL3_ASPFC  (B0XMZ5), LCL3_ASPFN  (B8MY73), LCL3_ASPFU  (Q4WK77), 
LCL3_ASPNC  (A2Q8K8), LCL3_ASPOR  (Q2URN2), LCL3_ASPTN  (Q0CUT8), 
LCL3_BOTFB  (A6RP27), LCL3_CANAL  (Q5AKW3), LCL3_CANAW  (C4YFU9), 
LCL3_CANDC  (B9W9Z5), LCL3_CANGA  (Q6FS62), LCL3_CANTT  (C5MC60), 
LCL3_CLAL4  (C4Y4X4), LCL3_COCP7  (C5P0Z4), LCL3_COLGM  (E3QWM6), 
LCL3_CRYGW  (E6R427), LCL3_DEBHA  (Q6BSY9), LCL3_EMENI  (Q5BGS2), 
LCL3_EREGS  (Q754Z2), LCL3_FUSV7  (C7YQ31), LCL3_KLULA  (Q6CMM1), 
LCL3_KOMPG  (C4QW04), LCL3_LACBS  (B0D7T0), LCL3_LACTC  (C5E2G4), 
LCL3_LEPMJ  (E4ZVE5), LCL3_LODEL  (A5E1Q5), LCL3_NAKDE  (Q874L8), 
LCL3_NEOFI  (A1D4S1), LCL3_PARBA  (C1H492), LCL3_PARBD  (C1GKM1), 
LCL3_PARBP  (C0SEQ8), LCL3_PENRW  (B6H1W0), LCL3_PHANO  (Q0UVH1), 
LCL3_PICGU  (A5DNZ8), LCL3_PICST  (A3GI61), LCL3_PODAN  (B2AU25), 
LCL3_PYRO7  (A4RMK0), LCL3_PYRTR  (B2WC78), LCL3_SCHCM  (D8QGA7), 
LCL3_SCHJY  (B6JYT1), LCL3_SCHPO  (O60168), LCL3_SCLS1  (A7ECE0), 
LCL3_TALMQ  (B6QNP4), LCL3_UNCRE  (C4JVW2), LCL3_VANPO  (A7TE94), 
LCL3_VERA1  (C9SI22), LCL3_YARLI  (Q6C427), LCL3_YEAS1  (B3LHF1), 
LCL3_YEAS2  (C7GW31), LCL3_YEAS6  (B5VIN9), LCL3_YEAS7  (A6ZU94), 
LCL3_YEAS8  (C8Z8G3), LCL3_YEAST  (P53153), LCL3_ZYGRC  (C5DZY8), 
SND1_SCHPO  (Q9Y7U7), TSN1_ARATH  (Q8VZG7), TSN2_ARATH  (Q9FLT0), 
Y133_MYCPN  (P75265), Y186_MYCGE  (P47432), YHCR_BACSU  (P54602)
» more

PDB
[Detailed view]
269 PDB

1A2T; 1A2U; 1A3T; 1A3U; 1A3V; 1AEX; 1ENA; 1ENC; 1EQV; 1EY0; 1EY4; 1EY5; 1EY6; 1EY7; 1EY8; 1EY9; 1EYA; 1EYC; 1EYD; 1EZ6; 1EZ8; 1F2M; 1F2Y; 1F2Z; 1JOK; 1JOO; 1JOQ; 1JOR; 1KAA; 1KAB; 1KDA; 1KDB; 1KDC; 1NSN; 1NUC; 1RKN; 1SNC; 1SND; 1SNM; 1SNO; 1SNP; 1SNQ; 1STA; 1STB; 1STG; 1STH; 1STN; 1STY; 1SYB; 1SYC; 1SYD; 1SYE; 1SYF; 1SYG; 1U9R; 2ENB; 2EXZ; 2EY1; 2EY2; 2EY5; 2EY6; 2EYF; 2EYH; 2EYJ; 2EYL; 2EYM; 2EYO; 2EYP; 2F0D; 2F0E; 2F0F; 2F0G; 2F0H; 2F0I; 2F0J; 2F0K; 2F0L; 2F0M; 2F0N; 2F0O; 2F0P; 2F0S; 2F0T; 2F0U; 2F0V; 2F0W; 2F3V; 2F3W; 2KHS; 2LKV; 2M00; 2NUC; 2OXP; 2PQE; 2PW5; 2PW7; 2PYK; 2PZT; 2PZU; 2PZW; 2QDB; 2RBM; 2RDF; 2RKS; 2SNM; 2SNS; 2SOB; 3BDC; 3C1E; 3C1F; 3D4D; 3D4W; 3D6C; 3D8G; 3DMU; 3E5S; 3EJI; 3ERO; 3ERQ; 3EVQ; 3H6M; 3HEJ; 3HZX; 3ITP; 3LX0; 3MHB; 3MVV; 3MXP; 3MZ5; 3NHH; 3NK9; 3NP8; 3NQT; 3NUC; 3NXW; 3OSO; 3OWF; 3P75; 3PMF; 3QOJ; 3QOL; 3R3O; 3RUZ; 3S9W; 3SHL; 3SK4; 3SK5; 3SK6; 3SK8; 3SR1; 3T13; 3T16; 3TME; 3TP5; 3TP6; 3TP7; 3TP8; 3U9O; 4DF7; 4E6I; 4EQN; 4EQO; 4EQP; 4EVO; 4F8M; 4H7B; 4HMI; 4HMJ; 4HTH; 4I65; 4IAL; 4ID6; 4IUN; 4IZ8; 4J1M; 4J6H; 4K14; 4K5V; 4K5W; 4K5X; 4K6D; 4K8I; 4K8J; 4KD4; 4KHV; 4KJN; 4KJO; 4KTA; 4KV6; 4KY5; 4KY6; 4KY7; 4LAA; 4ME5; 4MIU; 4N9P; 4NMZ; 4ODG; 4OL7; 4PMC; 4PNY; 4QB4; 4QF4; 4QMG; 4R8N; 4RKB; 4RKL; 4TRD; 4WOR; 4WRD; 4YIJ; 4ZUI; 4ZUJ; 5C3W; 5C3X; 5C4Z; 5C5L; 5C5M; 5C6A; 5CC4; 5CGK; 5CR3; 5CV4; 5CV5; 5CV8; 5CV9; 5DAU; 5DEH; 5E1F; 5EGT; 5EKK; 5EKL; 5I6W; 5I9O; 5I9P; 5IGB; 5IGC; 5IGE; 5IGF; 5IGG; 5IIF; 5IOC; 5IOD; 5ISR; 5J22; 5JAV; 5K5P; 5KGU; 5KRU; 5KYI; 5KYL; 5NUC; 6AMF; 6B8R; 6EEG; 6EEK; 6OK8; 6U0W; 6U0X; 6XSB; 6XSC; 6XSE; 6XSF; 6XSG; 6XSH; 6XSI; 7KNW; 7KNX; 9C11
» more