PROSITE entry PS01288
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry
Entry name [info] | UPF0027 |
Accession [info] | PS01288 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1997 CREATED;
01-NOV-1997 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00990 |
Name and characterization of the entry
Description [info] | Uncharacterized protein family UPF0027 signature. |
Pattern [info] |
Q-[LIVM]-x-N-x-A-x-[LIVM]-P-x-I-x(6)-[LIVM]-P-D-x-H-x-G-x-G-x(2)-[IV]-G. |
Numerical results [info]
Total number of hits | 34 in 34 different sequences |
Number of true positive hits | 34 in 34 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 11 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 75.56 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
34 sequences
RTCB1_CULQU (B0WCT9), RTCB2_CULQU (B0XKF3), RTCB_AEDAE (Q17FP1), RTCB_ANOGA (Q7Q412), RTCB_BOVIN (Q5E9T9), RTCB_BRAFL (C3YN79), RTCB_BRUMA (A8QC60), RTCB_CAEEL (P90838), RTCB_CHLRE (A8JC00), RTCB_DANRE (Q6NZS4), RTCB_DICDI (Q54Y09), RTCB_DROME (Q9VIW7), RTCB_ECOLI (P46850), RTCB_HUMAN (Q9Y3I0), RTCB_MACFA (Q4R6X4), RTCB_METJA (Q58095), RTCB_METKA (Q8TUS2), RTCB_METMP (Q6LXF9), RTCB_METTH (O27634), RTCB_MICCC (C1E9Y5), RTCB_MICPC (C1MI97), RTCB_MONBE (A9UXG6), RTCB_MOUSE (Q99LF4), RTCB_MYCBO (P59975), RTCB_MYCTO (P9WGW4), RTCB_MYCTU (P9WGW5), RTCB_NEMVE (A7RKF6), RTCB_PAPAN (A9CB42), RTCB_PIG(Q19PY3), RTCB_RAT(Q6AYT3), RTCB_THEAN (Q4U923), RTCB_THEPA (Q4N1R8), RTCB_TRIAD (B3RID0), RTCB_XENTR (Q561P3)» more
|
UniProtKB/Swiss-Prot False negative sequences |
11 sequences
RTCB1_ENTDS (B0EAV2), RTCB1_ENTH1 (C4M244), RTCB2_ENTDS (B0EIW5), RTCB2_ENTH1 (C4M6T2), RTCB_OSTLU (A4S3S3), RTCB_OSTTA (Q00ZY2), RTCB_PLABA (Q4YUZ9), RTCB_PLAF7 (Q8IIU6), RTCB_PLAKH (B3L4K9), RTCB_PLAYO (Q7RI54), RTCB_THAPS (B8LBM8)» more |
PDB [Detailed view] |
1 PDB
7P3B |