PROSITE entry PS01299

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PURL: https://purl.expasy.org/prosite/signature/PS01299

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General information about the entry

Entry name [info]	EPHRIN_RBD_1
Accession [info]	PS01299
Entry type [info]	PATTERN
Date [info]	01-NOV-1997 CREATED; 01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC01003

Name and characterization of the entry

Description [info]	Ephrin receptor-binding (ephrin RBD) domain signature.
Pattern [info]	[KRQ]-[LF]-[CST]-x-K-[IF]-Q-x-[FY]-[ST]-[PA]-x(3)-G-x-E-F-x(5)-[FY](2)- x(2)-[SA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.

Total number of hits	28 in 28 different sequences
Number of true positive hits	28 in 28 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	3
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	90.32 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

28 sequences

EFNA1_HUMAN (P20827), EFNA1_MOUSE (P52793), EFNA1_PIG   (Q06AS9),

EFNA1_RAT   (P97553), EFNA1_XENLA (P52794), EFNA2_CHICK (P52802), 
EFNA2_DANRE (P79727), EFNA2_HUMAN (O43921), EFNA2_MOUSE (P52801), 
EFNA3_HUMAN (P52797), EFNA3_MOUSE (O08545), EFNA4_HUMAN (P52798), 
EFNA4_MOUSE (O08542), EFNA5_CHICK (P52804), EFNA5_DANRE (P79728), 
EFNA5_HUMAN (P52803), EFNA5_MOUSE (O08543), EFNA5_RAT   (P97605), 
EFNB1_CHICK (O73612), EFNB1_HUMAN (P98172), EFNB1_MOUSE (P52795), 
EFNB1_RAT   (P52796), EFNB1_XENLA (O13097), EFNB2_DANRE (O73874), 
EFNB2_HUMAN (P52799), EFNB2_MOUSE (P52800), EFNB3_HUMAN (Q15768), 
EFNB3_MOUSE (O35393)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

3 sequences

EFN4_CAEBR  (Q624D2), EFN4_CAEEL  (O44516), EFNA1_BOVIN (Q3ZC64)

PDB
[Detailed view]

27 PDB

pdb_00001iko; pdb_00001kgy; pdb_00001shw; pdb_00001shx; pdb_00002hle; pdb_00002i85; pdb_00002vsk; pdb_00002vsm; pdb_00002wo2; pdb_00002wo3; pdb_00002x11; pdb_00003czu; pdb_00003d12; pdb_00003gxu; pdb_00003hei; pdb_00003mbw; pdb_00003mx0; pdb_00004bk5; pdb_00004bka; pdb_00004bkf; pdb_00004l0p; pdb_00004m4r; pdb_00004uf7; pdb_00006p7s; pdb_00006p7y; pdb_00006pdl; pdb_00006thg
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