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PROSITE entry PS01330


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PURL: https://purl.expasy.org/prosite/signature/PS01330

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General information about the entry

Entry name [info] PABS_1
Accession [info] PS01330
Entry type [info] PATTERN
Date [info] 01-JUL-1999 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC01033

Name and characterization of the entry

Description [info] Polyamine biosynthesis (PABS) domain signature.
Pattern [info] 
[VAI]-[LAV]-[LIV](2)-G-G-G-x-[GC]-x(2)-[LIVA]-x-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 205 in 205 different sequences
Number of true positive hits 205 in 205 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 40
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 83.67 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 205 sequences 

PMT1_NICAT  (Q93XQ5), PMT1_TOBAC  (Q42963), PMT2_NICAT  (Q93XQ4),
» more

UniProtKB/Swiss-Prot
False negative sequences		 40 sequences 

ACL5_ARATH  (Q9S7X6), SPEE1_RALN1 (Q8XQC8), SPEE1_STRCO (Q9L091),
» more

PDB
[Detailed view]		 26 PDB

1INL; 1IY9; 1JQ3; 1MJF; 1UIR; 1XJ5; 2E5W; 2O05; 2O06; 2O07; 2O0L; 2Q41;
» more