Home  |  Contact
Entry: PS01340

General information about the entry

Entry name [info] CORNICHON
Accession [info] PS01340
Entry type [info] PATTERN
Date [info] 01-DEC-2001 CREATED;
01-DEC-2004 DATA UPDATE;
02-JUN-2021 INFO UPDATE.
PROSITE Doc. [info] PDOC01042

Name and characterization of the entry

Description [info] Cornichon family signature.
Pattern [info] 
[VI]-x(3)-[DE]-L-x(2)-D-[FY]-x-[NS]-[PS]-I-[DE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2021_03 which contains 565'254 sequence entries.


Total number of hits 20 in 20 different sequences
Number of true positive hits 20 in 20 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 5
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 80.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 20 sequences 

CNI1_CAEEL  (Q22361    ), CNIH1_BOVIN (Q5BIN6    ), CNIH1_HUMAN (O95406    ), 

CNIH1_MOUSE (O35372    ), CNIH1_PONAB (Q5RDB5    ), CNIH2_CHICK (Q401C0    ), 
CNIH2_DANRE (Q5BL21    ), CNIH2_HUMAN (Q6PI25    ), CNIH2_MOUSE (O35089    ), 
CNIH2_RAT   (Q5BJU5    ), CNIH2_XENTR (Q0VFK3    ), CNIH3_HUMAN (Q8TBE1    ), 
CNIH3_MOUSE (Q6ZWS4    ), CNIH3_RAT   (D0Q0Y7    ), CNI_DROME   (P49858    ), 
CNI_DROVI   (P52159    ), ERV14_SCHPO (Q9P6K6    ), ERV14_YEAST (P53173    ), 
ERV15_YEAST (P38312    ), YEY5_SCHPO  (O14038    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 5 sequences 

CNIH1_ARATH (Q9C7D7    ), CNIH2_ARATH (Q3EDD7    ), CNIH3_ARATH (Q8GWT5    ), 

CNIH4_ARATH (Q84W04    ), CNIH5_ARATH (Q9SZ74    )
» more

PDB
[Detailed view]		 4 PDB

6PEQ; 6UCB; 6UD4; 6UD8

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission