PROSITE entry PS01340
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General information about the entry
| Entry name [info] | CORNICHON |
| Accession [info] | PS01340 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-2001 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC01042 |
Name and characterization of the entry
| Description [info] | Cornichon family signature. |
| Pattern [info] |
[VI]-x(3)-[DE]-L-x(2)-D-[FY]-x-[NS]-[PS]-I-[DE]. |
Numerical results [info]
| Total number of hits | 20 in 20 different sequences |
| Number of true positive hits | 20 in 20 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 5 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 80.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
20 sequences
CNI1_CAEEL (Q22361), CNIH1_BOVIN (Q5BIN6), CNIH1_HUMAN (O95406), CNIH1_MOUSE (O35372), CNIH1_PONAB (Q5RDB5), CNIH2_CHICK (Q401C0), CNIH2_DANRE (Q5BL21), CNIH2_HUMAN (Q6PI25), CNIH2_MOUSE (O35089), CNIH2_RAT (Q5BJU5), CNIH2_XENTR (Q0VFK3), CNIH3_HUMAN (Q8TBE1), CNIH3_MOUSE (Q6ZWS4), CNIH3_RAT (D0Q0Y7), CNI_DROME (P49858), CNI_DROVI (P52159), ERV14_SCHPO (Q9P6K6), ERV14_YEAST (P53173), ERV15_YEAST (P38312), YEY5_SCHPO (O14038)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
5 sequences
CNIH1_ARATH (Q9C7D7), CNIH2_ARATH (Q3EDD7), CNIH3_ARATH (Q8GWT5), CNIH4_ARATH (Q84W04), CNIH5_ARATH (Q9SZ74)» more |
| PDB [Detailed view] |
17 PDB
6PEQ; 6UCB; 6UD4; 6UD8; 7LDD; 7LDE; 7LEP; 7OCA; 7OCE; 7OCF; 8SS2; 8SS3; 8SS4; 8SS6; 8SS7; 8SSA; 8SSB » more |