PROSITE entry PS01358
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General information about the entry
Entry name [info] | ZF_RANBP2_1 |
Accession [info] | PS01358 |
Entry type [info] | PATTERN |
Date [info] |
01-DEC-2001 CREATED;
01-DEC-2001 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC50199 |
Name and characterization of the entry
Description [info] | Zinc finger RanBP2-type signature. |
Pattern [info] |
W-x-C-x(2,4)-C-x(3)-N-x(6)-C-x(2)-C. |
Numerical results [info]
Total number of hits | 189 in 112 different sequences |
Number of true positive hits | 189 in 112 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 3 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 98.44 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 8 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
112 sequences
ARI13_ARATH (Q9FFN9), ARI14_ARATH (Q9FFP1), ARI15_ARATH (Q84RQ8), ARI16_ARATH (Q9C5A4), ARI8_ARATH (Q8W468), CAN15_HUMAN (O75808), CAN15_MOUSE (Q9JLG8), CAND_DROME (P27398), CAZ_DROME (Q27294), DRI1_SCHPO (O13801), DRI1_YEAST (P32770), EWS_HUMAN (Q01844), EWS_MOUSE (Q61545), FUS_BOVIN (Q28009), FUS_HUMAN (P35637), FUS_MOUSE (P56959), HDA15_ARATH (Q8GXJ1), HOIL1_DANRE (A9JTG5), HOIL1_DICLA (E6ZIJ1), HOIL1_HUMAN (Q9BYM8), HOIL1_MOUSE (Q9WUB0), HOIL1_RAT (Q62921), LUBEL_DROME (Q8IPJ3), MDM2_CANLF (P56950), MDM2_DANRE (O42354), MDM2_FELCA (Q7YRZ8), MDM2_HORSE (P56951), MDM2_HUMAN (Q00987), MDM2_MESAU (Q60524), MDM2_MOUSE (P23804), MDM2_XENLA (P56273), MDM4_BOVIN (Q2HJ21), MDM4_DANRE (Q7ZUW7), MDM4_HUMAN (O15151), MDM4_MOUSE (O35618), MDM4_RAT(Q5XIN1), MDM4_XENLA (Q7ZYI3), NEIL3_BOVIN (Q3MHN7), NEIL3_HUMAN (Q8TAT5), NEIL3_MOUSE (Q8K203), NEIL3_XENLA (A0A1L8HU22), NPL41_CAEEL (H2KYU6), NPL42_CAEEL (Q95QZ9), NPL4_DROME (Q9VBP9), NPL4_HUMAN (Q8TAT6), NPL4_MOUSE (P60670), NPL4_RAT(Q9ES54), NU153_DROME (Q9VXE6), NU153_HUMAN (P49790), NU153_RAT (P49791), NU153_XENLA (Q640Z6), RBL14_ARATH (Q8RXW0), RBM10_HUMAN (P98175), RBM10_MOUSE (Q99KG3), RBM10_RAT (P70501), RBM5A_XENLA (A0JMV4), RBM5B_XENLA (Q6DDU9), RBM5_BOVIN (Q1RMU5), RBM5_HUMAN (P52756), RBM5_MOUSE (Q91YE7), RBM5_RAT(B2GV05), RBM5_XENTR (A4IGK4), RBP2_DROME (A0A0B4K7J2), RBP2_HUMAN (P49792), RBP2_MOUSE (Q9ERU9), RBP2_PANTR (H2QII6), RBP56_HUMAN (Q92804), RNF31_HUMAN (Q96EP0), RNF31_MOUSE (Q924T7), RYBPA_DANRE (Q7SYB3), RYBPB_DANRE (Q5EG55), RYBP_HUMAN (Q8N488), RYBP_MOUSE (Q8CCI5), SHRPN_BOVIN (E1BDF2), SHRPN_HUMAN (Q9H0F6), SHRPN_MOUSE (Q91WA6), SHRPN_RAT (Q9EQL9), SUA_ARATH (F4JCU0), TA15B_ARATH (Q94KD0), TAB2_DANRE (Q5RFW2), TAB2_HUMAN (Q9NYJ8), TAB2_MOUSE (Q99K90), TAB2_RAT(Q5U303), TAB3_HUMAN (Q8N5C8), TAB3_MOUSE (Q571K4), TAB3_XENLA (Q7ZXH3), TAF15_ARATH (Q9AST1), TAMO_DROME (Q9W1A4), TRBID_DROME (Q9VH90), TX13A_HUMAN (Q9BXU3), TX13C_HUMAN (A0A0J9YWL9), TX13D_HUMAN (A0A0J9YY54), VAR3_ARATH (Q8S9K3), YAF2_HUMAN (Q8IY57), YAF2_MOUSE (Q99LW6), YDMD_SCHPO (P87143), ZRAB2_CHICK (Q5ZLX5), ZRAB2_HUMAN (O95218), ZRAB2_MOUSE (Q9R020), ZRAB2_PIG (Q19QU3), ZRAB2_PONAB (Q5R580), ZRAB2_RAT (O35986), ZRAB3_BOVIN (E1BB03), ZRAB3_HUMAN (Q5FWF4), ZRAB3_MOUSE (Q6NZP1), ZRAN1_BOVIN (A6QP16), ZRAN1_HUMAN (Q9UGI0), ZRAN1_MOUSE (Q7M760), ZRAN1_XENTR (B1H2Q2), ZRN1A_XENLA (Q5U595), ZRN1B_DANRE (A0JMQ9), ZRN1B_XENLA (Q6NUB7)» more
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UniProtKB/Swiss-Prot False negative sequences |
3 sequences
VPS36_SCHPO (O43038), VPS36_YEAST (Q06696), YZR3_ARATH (Q8GZ43) |
PDB [Detailed view] |
58 PDB
1N0Z; 1NJ3; 1Q5W; 2C6A; 2C6B; 2CR8; 2CRC; 2D9G; 2EBQ; 2EBR; 2EBV; 2GQE; 2K0C; 2K1P; 2LK0; 2LK1; 2MXV; 2WWZ; 2WX0; 2WX1; 3A9J; 3A9K; 3B08; 3B0A; 3CH5; 3G9Y; 3GJ3; 3GJ4; 3GJ5; 3GJ6; 3GJ7; 3GJ8; 4OWF; 4S1Z; 4XXB; 5AF6; 5YVG; 5YVH; 6G99; 7E62; 7MNP; 7MNQ; 7MNR; 7MNS; 7MNT; 7MNU; 7MNV; 7MO1; 7MO2; 7MO3; 7MO4; 7MO5; 7PCV; 7PDV; 7R5J; 7R5K; 7TV4; 8BGU » more |