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PROSITE entry PS01358


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PURL: https://purl.expasy.org/prosite/signature/PS01358

Direct ScanProsite submission
General information about the entry

Entry name [info] ZF_RANBP2_1
Accession [info] PS01358
Entry type [info] PATTERN
Date [info] 01-DEC-2001 CREATED;
01-DEC-2001 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC50199

Name and characterization of the entry

Description [info] Zinc finger RanBP2-type signature.
Pattern [info] 
W-x-C-x(2,4)-C-x(3)-N-x(6)-C-x(2)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 194 in 114 different sequences
Number of true positive hits 194 in 114 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.48 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 8
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 114 sequences 

ARI13_ARATH (Q9FFN9), ARI14_ARATH (Q9FFP1), ARI15_ARATH (Q84RQ8), 

ARI16_ARATH (Q9C5A4), ARI8_ARATH  (Q8W468), CAN15_HUMAN (O75808), 
CAN15_MOUSE (Q9JLG8), CAND_DROME  (P27398), CAZ_DROME   (Q27294), 
DRI1_SCHPO  (O13801), DRI1_YEAST  (P32770), EWS_HUMAN   (Q01844), 
EWS_MOUSE   (Q61545), FUS_BOVIN   (Q28009), FUS_HUMAN   (P35637), 
FUS_MOUSE   (P56959), HDA15_ARATH (Q8GXJ1), HOIL1_DANRE (A9JTG5), 
HOIL1_DICLA (E6ZIJ1), HOIL1_HUMAN (Q9BYM8), HOIL1_MOUSE (Q9WUB0), 
HOIL1_RAT   (Q62921), LUBEL_DROME (Q8IPJ3), MDM2_CANLF  (P56950), 
MDM2_DANRE  (O42354), MDM2_FELCA  (Q7YRZ8), MDM2_HORSE  (P56951), 
MDM2_HUMAN  (Q00987), MDM2_MESAU  (Q60524), MDM2_MOUSE  (P23804), 
MDM2_XENLA  (P56273), MDM4_BOVIN  (Q2HJ21), MDM4_DANRE  (Q7ZUW7), 
MDM4_HUMAN  (O15151), MDM4_MOUSE  (O35618), MDM4_RAT(Q5XIN1), 
MDM4_XENLA  (Q7ZYI3), NEIL3_BOVIN (Q3MHN7), NEIL3_HUMAN (Q8TAT5), 
NEIL3_MOUSE (Q8K203), NEIL3_XENLA (A0A1L8HU22), NPL41_CAEEL (H2KYU6), 
NPL42_CAEEL (Q95QZ9), NPL4_DROME  (Q9VBP9), NPL4_HUMAN  (Q8TAT6), 
NPL4_MOUSE  (P60670), NPL4_RAT(Q9ES54), NU153_DROME (Q9VXE6), 
NU153_HUMAN (P49790), NU153_MOUSE (E9Q3G8), NU153_RAT   (P49791), 
NU153_XENLA (Q640Z6), RBL14_ARATH (Q8RXW0), RBM10_HUMAN (P98175), 
RBM10_MOUSE (Q99KG3), RBM10_RAT   (P70501), RBM5A_XENLA (A0JMV4), 
RBM5B_XENLA (Q6DDU9), RBM5_BOVIN  (Q1RMU5), RBM5_HUMAN  (P52756), 
RBM5_MOUSE  (Q91YE7), RBM5_RAT(B2GV05), RBM5_XENTR  (A4IGK4), 
RBP2_DROME  (A0A0B4K7J2), RBP2_HUMAN  (P49792), RBP2_MOUSE  (Q9ERU9), 
RBP2_PANTR  (H2QII6), RBP56_HUMAN (Q92804), RNF31_HUMAN (Q96EP0), 
RNF31_MOUSE (Q924T7), RYBPA_DANRE (Q7SYB3), RYBPB_DANRE (Q5EG55), 
RYBP_HUMAN  (Q8N488), RYBP_MOUSE  (Q8CCI5), SHRPN_BOVIN (E1BDF2), 
SHRPN_HUMAN (Q9H0F6), SHRPN_MOUSE (Q91WA6), SHRPN_RAT   (Q9EQL9), 
SUA_ARATH   (F4JCU0), TA15B_ARATH (Q94KD0), TAB2_DANRE  (Q5RFW2), 
TAB2_HUMAN  (Q9NYJ8), TAB2_MOUSE  (Q99K90), TAB2_RAT(Q5U303), 
TAB3_HUMAN  (Q8N5C8), TAB3_MOUSE  (Q571K4), TAB3_XENLA  (Q7ZXH3), 
TAF15_ARATH (Q9AST1), TAMO_DROME  (Q9W1A4), TRBID_DROME (Q9VH90), 
TX13A_HUMAN (Q9BXU3), TX13A_MOUSE (A2AFS9), TX13C_HUMAN (A0A0J9YWL9), 
TX13D_HUMAN (A0A0J9YY54), VAR3_ARATH  (Q8S9K3), YAF2_HUMAN  (Q8IY57), 
YAF2_MOUSE  (Q99LW6), YDMD_SCHPO  (P87143), ZRAB2_CHICK (Q5ZLX5), 
ZRAB2_HUMAN (O95218), ZRAB2_MOUSE (Q9R020), ZRAB2_PIG   (Q19QU3), 
ZRAB2_PONAB (Q5R580), ZRAB2_RAT   (O35986), ZRAB3_BOVIN (E1BB03), 
ZRAB3_HUMAN (Q5FWF4), ZRAB3_MOUSE (Q6NZP1), ZRAN1_BOVIN (A6QP16), 
ZRAN1_HUMAN (Q9UGI0), ZRAN1_MOUSE (Q7M760), ZRAN1_XENTR (B1H2Q2), 
ZRN1A_XENLA (Q5U595), ZRN1B_DANRE (A0JMQ9), ZRN1B_XENLA (Q6NUB7)
» more

UniProtKB/Swiss-Prot
False negative sequences		 3 sequences 

VPS36_SCHPO (O43038), VPS36_YEAST (Q06696), YZR3_ARATH  (Q8GZ43)


				
	

	

		PDB
[Detailed view]		
		
			71 PDB
			


			pdb_00001n0z; pdb_00001nj3; pdb_00001q5w; pdb_00002c6a; pdb_00002c6b; pdb_00002cr8; pdb_00002crc; pdb_00002d9g; pdb_00002ebq; pdb_00002ebr; pdb_00002ebv; pdb_00002gqe; 
			
				pdb_00002k0c; pdb_00002k1p; pdb_00002lk0; pdb_00002lk1; pdb_00002mxv; pdb_00002wwz; pdb_00002wx0; pdb_00002wx1; pdb_00003a9j; pdb_00003a9k; pdb_00003b08; pdb_00003b0a; 
				pdb_00003ch5; pdb_00003g9y; pdb_00003gj3; pdb_00003gj4; pdb_00003gj5; pdb_00003gj6; pdb_00003gj7; pdb_00003gj8; pdb_00004owf; pdb_00004s1z; pdb_00004xxb; pdb_00005af6; 
				pdb_00005yvg; pdb_00005yvh; pdb_00006g99; pdb_00007e62; pdb_00007mnp; pdb_00007mnq; pdb_00007mnr; pdb_00007mns; pdb_00007mnt; pdb_00007mnu; pdb_00007mnv; pdb_00007mo1; 
				pdb_00007mo2; pdb_00007mo3; pdb_00007mo4; pdb_00007mo5; pdb_00007pcv; pdb_00007pdv; pdb_00007r5j; pdb_00007r5k; pdb_00007tv4; pdb_00007yui; pdb_00008bgu; pdb_00008im5; 
				pdb_00008ons; pdb_00008pp6; pdb_00009avt; pdb_00009avw; pdb_00009azj; pdb_00009b0b; pdb_00009b0z; pdb_00009b12; pdb_00009dby; pdb_00009dde; pdb_00009dg3
			
			

			» more